Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed08g2876 | ATGCATTTCGAAATTTCGTACATTGTTTATTTGGGTGGTCAGAAGTTTGGAAAAAAATCGAGTATATTTGATGTCAAACTTGCAAAACAGTCTCAATTTGATATATTAGAATCAGTCTTGGAAAGCAAAGTGGCTGTCAAAGAGTCACTTATCTATTCGTATAGCAAATACATGAATGGATTTGCTGCCTTGCTTGACGAAAAGCAAGTAGTGGATCTTGAAAAGAATCCAAGCGTGGTATCGGTTTTTGAGAACACGATAAGACATTTGCACACAACGCGATCATGGCACTTTCTGGGAATGGAAAATGATGCCGGAATTCCTGCCAACTCCATTTGGAATGCTGCCAAGTTCGGCGAAGATGTCATTATCGGGAACCTCGACACCGGTGTTTGGCCAGAATCCAAGAGCTTCGACGATACAGGCTACGGCCCTGTCCCCAAAAGGTGGATGGGAGAATGTGATGGTGGCGCCAACTTTACTTGCAACAGGAAGTTGATTGGAGCAAGATATTTCTACCAAGGAATTGAAAGTACAAATGGTCCATTAAACATTAGCATGCACACTGCTCGTGACCATGAAGGCCATGGCTCACACACTTTGTCAACTGCGGGAGGTAACCTTGTCCCTGGAGCCAACGTCTTTGGCAGTGGCAACGGCACTGCAAAAGGAGGCTCCCCCAAGGCTCGTGTTGTTGCCTACAAGGTATGCTGGCCTGGTGGCTGCTCCGACGCAGATATCCTGGCTGGTTTCGAAGCTGCCATGGACGACGGTGTTGATGTTCTCTCTGTCTCTCTTGGTTCTAGAGCTACGCAGTTTGCTACCGACCCAGTTTCGGTAGCATCGTTCCATGCTGTTCAACAAGGAATCGTTGTGGTTTGCTCAGCTGGAAATAACGGCCCGGATCCTGCCACTGTAGCCAATATAGCTCCTTGGATGTTCACTGTTGCAGCTAGCACTATCGATCGAGAATTCGTCAGTTATGTGGGGCTCGGAAACAAGAAGCAAATCAAGGGTTCAAGTCTTTCATCTGAAGGATTGGCGGTTGGTAGTCTCCACCCTTTGATCAATGCTGTGGATGCAAAAGCTGCCAATGTCCCTGATAAACTTGCCCAACTTTGCGAGAAGGATTCTCTTGATCCCGCAAAGGCAAAAGGGAAGATTGTAGTTTGCCTCTGTGGAGACGATGAAAACGTGGATCAAGGTTTCGAGGTTCGTCGTGCCGGTGGTGTCGGTCTGATTTTAGTAAACGACGAGGAAGATGGAGCAGACACTATATCCGATCCGCATTTTCTTCCTGCTTCTCATGTTAGCCATGAAGATGGACTTTTGATTGCTCAATATATGAAATCGACCACAACACCGGAGGCTTCCATATCCGCTGTAAAGACTGAGATTGGAGTTAAACCTTCACCTGTCATGGCTGTATTCTCATCAAGAGGCCCTAATCCTATCGAAGAATCCATGATCAAGCCTGATATCACAGCACCGGGAGTGACTATAATCGCATCCATGCCTGAAGCAGTGGCAGCATCTAAATCGGCACTCGATACGCGCCGGGTGCCCTTTAACATTTTATCTGGCACTTCCATGGCCTGCCCGCATATCTCAGGTATTGCAGGGCTTCTCAGGGTCCTCAATCCCACTTGGAGTCCAGCAGCTATCAGATCTGCCATGATGACTACTGCCATAACAATTGACAACACCAATCATTCAATGCTTAACTCCAACAAAGCCGATGCAACCCCATTTGATTATGGGGCAGGCTATGTCCAACCCAACAATGCAATGGACCCCGGTCTCATTTACAACACAACCATCGAGGATTACTTGAACTTCTTATGCGCAAAGAAGTACACCGACGCTGAACTCAAGAAATTCTCTACCCAAGCATTCTTGTGCGAGGAATCGTTTGCAGTAACAGATCTTAACTACCCATCGATCTCAATCCCGAAGTTGGCTGCGGGTGCCCCAGTGACTATAAACAGAAGACTTCTGAACGTGGGAAGCCCGGGTACGTATGTTGCACAGGTGAAGGTGCCCGAGAGCGTTCAAGCTAAGGTCGAGCCGAGTTCGTTGCAGTTTAGCAAAGTGGATGAAGAGAAGTCTTTCAAGATTGTATTTCAACATGTAGGGGAGCGACGTGTAAGCTATGAGTTTGGAACATTGGAATGGTCAGATGGAAAGCATTTTGTTAGAAGTCCTTTAGCTTTCATGGGATGA | 2223 | 46.96 | MHFEISYIVYLGGQKFGKKSSIFDVKLAKQSQFDILESVLESKVAVKESLIYSYSKYMNGFAALLDEKQVVDLEKNPSVVSVFENTIRHLHTTRSWHFLGMENDAGIPANSIWNAAKFGEDVIIGNLDTGVWPESKSFDDTGYGPVPKRWMGECDGGANFTCNRKLIGARYFYQGIESTNGPLNISMHTARDHEGHGSHTLSTAGGNLVPGANVFGSGNGTAKGGSPKARVVAYKVCWPGGCSDADILAGFEAAMDDGVDVLSVSLGSRATQFATDPVSVASFHAVQQGIVVVCSAGNNGPDPATVANIAPWMFTVAASTIDREFVSYVGLGNKKQIKGSSLSSEGLAVGSLHPLINAVDAKAANVPDKLAQLCEKDSLDPAKAKGKIVVCLCGDDENVDQGFEVRRAGGVGLILVNDEEDGADTISDPHFLPASHVSHEDGLLIAQYMKSTTTPEASISAVKTEIGVKPSPVMAVFSSRGPNPIEESMIKPDITAPGVTIIASMPEAVAASKSALDTRRVPFNILSGTSMACPHISGIAGLLRVLNPTWSPAAIRSAMMTTAITIDNTNHSMLNSNKADATPFDYGAGYVQPNNAMDPGLIYNTTIEDYLNFLCAKKYTDAELKKFSTQAFLCEESFAVTDLNYPSISIPKLAAGAPVTINRRLLNVGSPGTYVAQVKVPESVQAKVEPSSLQFSKVDEEKSFKIVFQHVGERRVSYEFGTLEWSDGKHFVRSPLAFMG | 740 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 39910216 | 39915144 | + | Sed0024525.1 | Sed08g2876 | 724652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed08g2876 | 740 | FunFam | Subtilisin-like protease SBT5.3 | 2 | 91 | - | - | |
Sed08g2876 | 740 | Gene3D | Peptidase S8/S53 domain | 121 | 610 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed08g2876 | 740 | Gene3D | - | 614 | 739 | - | - | |
Sed08g2876 | 740 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 528 | 538 | IPR023828 | - | |
Sed08g2876 | 740 | SUPERFAMILY | Subtilisin-like | 90 | 601 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed08g2876 | 740 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 3 | 91 | IPR037045 | - | |
Sed08g2876 | 740 | FunFam | Subtilisin-like protease SBT1.5 | 121 | 333 | - | - | |
Sed08g2876 | 740 | Gene3D | - | 322 | 466 | - | - | |
Sed08g2876 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 119 | 138 | IPR015500 | - | |
Sed08g2876 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 192 | 205 | IPR015500 | - | |
Sed08g2876 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 527 | 543 | IPR015500 | - | |
Sed08g2876 | 740 | SUPERFAMILY | Protease propeptides/inhibitors | 25 | 90 | - | - | |
Sed08g2876 | 740 | Pfam | PA domain | 372 | 444 | IPR003137 | - | |
Sed08g2876 | 740 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 95 | 597 | - | - | |
Sed08g2876 | 740 | CDD | PA_subtilisin_like | 328 | 459 | - | - | |
Sed08g2876 | 740 | CDD | Peptidases_S8_3 | 89 | 564 | IPR034197 | - | |
Sed08g2876 | 740 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 7 | 736 | IPR045051 | - | |
Sed08g2876 | 740 | Pfam | Subtilase family | 119 | 589 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed08g2876 | 740 | FunFam | subtilisin-like protease SBT1.5 | 322 | 466 | - | - | |
Sed08g2876 | 740 | Pfam | Peptidase inhibitor I9 | 6 | 91 | IPR010259 | - | |
Sed08g2876 | 740 | Pfam | Fibronectin type-III domain | 642 | 737 | IPR041469 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed08g2876 | Sed-Chr8:39910216 | Sed08g2878 | Sed-Chr8:39924691 | 1.80E-252 | dispersed | |
Sed08g2876 | Sed-Chr8:39910216 | Sed08g2877 | Sed-Chr8:39916164 | 5.30E-244 | tandem | |
Sed03g1334 | Sed-Chr3:8497376 | Sed08g2876 | Sed-Chr8:39910216 | 3.00E-282 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed08g2876 | - | - | - | 0.0 |