Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed08g2877 | ATGGAGGCTTCCAATATTTCTCCATTGCTTTTGTTGTTGCTATTGTTCTTCTCTTTATTGCAAACTTCCACTATTGCCATTAAAAAGTCTTACATTGTTGCTTTGGATCCTTCCTCTAATTTGTCAACTCACTTCCAACAAGTGACAGCGTTTCATTATGATTTGTTGGGCTCTTTGCTGGGAAGTAAAAAGATGGCCCAGGAAGCTATTTTCTACTCCTATACTAGAAGTTTCAATGGTTTTGCAGCCAAACTTGATGAGAAGGAAGCAGCAGATCTAGCAAGAAACCCTAATGTGATATCAGTGTTAGAAAACAAGGCAAGAAAATTGCACACAACAAGGTCATGGAATTTTCTTGGCTTGGAGAAGGAACAAGGAAATATTCCTTCAAACTCCCTTTGGAAGGCTGCAGAGTTTGGTCAAGATATGATTGTAGGCAACATCGATTCAGGTGTTTGGCCCGAGTCAAAGAGCTTTAGTGATGAAGGGTATGGAGCTGTGCCATCAAAGTGGCGAGGCATTTGTCAAACCGATTCCAATTTTTACTGCAACAAAAAGCTTATTGGGGGAAGATATTTCCACAAAGGATATGAAGCCGCCGGTGGCGTTCTCGATCCCAGTTTACTCACAGTTCGCGATCACGACGGCCATGGAACCCACACTCTCTCCACCGCCGCCGGAAACTTCGTCGCCGGAGCCAACGTTTTCGGCCATGGAAACGGCACGGCCAAAGGCGGTGCTCCAAAAGCCCGTGTCGTCGCCTACAAGGTCTGCTGGCCCCCATTCAATGGCGGAATGTGCTTTGACGCCGATATCATCGCCGCCTTCGAAGCTGCCATCGCCGACGGAGTCGATGTCATTTCCGGTTCCATCGGTGCCACCGCCGGTGAATTTTTCAACGATCCAATCGCCATGATCTCTTTCCATGCCGTTCAACAAGGCATCGACGTCGTCCTCTCCGGCGGAAACGAAGGTCCTCTTCCCGGGACCGTCAGTAATGTCGCGCCCTGGGTGACCACCGTTGCGGCGAGCACCATGGACAGAGATTTCGCCAGTTATGTCGTGCTTGGAAATAAGAAAATCCTAAAGGGCGTAAGCCTTTCGTCCGTTGCCCCATTGCCTGAGAAGTTCTATCCATTGATCACTGCCGTGGATGCAAAATTTAGCAATATCACCGATTTATCTGCGCAATCATGTGGCGCGGGGACGCTCGATCCTATCAAGGTGAAGGGGAAGATCTTGATTTGTGTTGCAGGGGGGCTTCAACCAGTAGAAAAGGGTTACCATGCTGCACAAGCAGGTGCTGTGGGAATGATTTTGGCTAACCTTAATGAAAAGGGGGATGAAATCTTTCCTCAGTTGCACTTCCTTCCAGCTTCAGATATTACCAGTGGCGATGCCGAATTGCTTAAACAATATCTCACTTCCACCAAGACACCAGAAGCTCATTTAAAGAACGTGAAGACTGAGCTAGGAGTAAAACCGGCTCCAGTCATGGCTAGCTTTTCATCCCGAGGCCCCAACTTAGTAGTGAGCAATATCCTCAAGCCTGACATAACAGCGCCTGGTGTGACCATACTGGCGTCTTACCCCACTGTAACACCCCCCTTTCCTTCCACCAACGACCATCGGCGGATCCCGTTTAATGCACTCTCTGGAACTTCCATGTCCTGCCCTCACATCTCCGGTATTGTGGCCCTTCTCAAGTTCATTCATCCCAAATGGAGCCCGTCTGCCATTAAATCCGCAATTATGACCACTGCCAAAACACTAGACAACAACTTGAAAACAATCCTCGATTGGACCAAACTCGAAGCCACCCCCTTCGCTTATGGTGGAGGACATGTTGATCCGAATGCTGCAATGGACCCTGGCCTTGTTTATGATGCTACATTCGAGGACTACTTAAACTTCTTGTGTGCTCGAGGCTACAATGCAATGGATATTAAGAAATTCTATGATAAGCCATTTACTTGTGACAAGTCATTCCATGTCCGAGATCTCAACTACCCATCGTTCTCCATTGGGGAAGCATTGAAAGTTGGTGCTTCAGTGACCATCAATAGGAGACTTAAGAATGTGGGAAGTCCAGGCACATATGTGGCACAAGTGAAGGTGTCCCCACAAGTTTCGGTTTCGGTCAAGCCGAGCATGTTGCAGTTTAGCCGTCTTGGGGAAGAGAAGGCCTTCAAGGTCGTGGTGCAAAACAAGGGGAAAGTGAAACATGAAGGCTATGTGTTTGGAACATTGGTCTGGTATGATGGTAAGCATTCTGTTAAAAGTCCTATTGCAATCAATTTGGGATAA | 2307 | 47.64 | MEASNISPLLLLLLLFFSLLQTSTIAIKKSYIVALDPSSNLSTHFQQVTAFHYDLLGSLLGSKKMAQEAIFYSYTRSFNGFAAKLDEKEAADLARNPNVISVLENKARKLHTTRSWNFLGLEKEQGNIPSNSLWKAAEFGQDMIVGNIDSGVWPESKSFSDEGYGAVPSKWRGICQTDSNFYCNKKLIGGRYFHKGYEAAGGVLDPSLLTVRDHDGHGTHTLSTAAGNFVAGANVFGHGNGTAKGGAPKARVVAYKVCWPPFNGGMCFDADIIAAFEAAIADGVDVISGSIGATAGEFFNDPIAMISFHAVQQGIDVVLSGGNEGPLPGTVSNVAPWVTTVAASTMDRDFASYVVLGNKKILKGVSLSSVAPLPEKFYPLITAVDAKFSNITDLSAQSCGAGTLDPIKVKGKILICVAGGLQPVEKGYHAAQAGAVGMILANLNEKGDEIFPQLHFLPASDITSGDAELLKQYLTSTKTPEAHLKNVKTELGVKPAPVMASFSSRGPNLVVSNILKPDITAPGVTILASYPTVTPPFPSTNDHRRIPFNALSGTSMSCPHISGIVALLKFIHPKWSPSAIKSAIMTTAKTLDNNLKTILDWTKLEATPFAYGGGHVDPNAAMDPGLVYDATFEDYLNFLCARGYNAMDIKKFYDKPFTCDKSFHVRDLNYPSFSIGEALKVGASVTINRRLKNVGSPGTYVAQVKVSPQVSVSVKPSMLQFSRLGEEKAFKVVVQNKGKVKHEGYVFGTLVWYDGKHSVKSPIAINLG | 768 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 39916164 | 39923049 | + | Sed0002069.1 | Sed08g2877 | 724653 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed08g2877 | 768 | FunFam | Subtilisin-like protease SBT1.5 | 639 | 768 | - | - | |
Sed08g2877 | 768 | Pfam | Peptidase inhibitor I9 | 30 | 111 | IPR010259 | - | |
Sed08g2877 | 768 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 31 | 763 | IPR045051 | - | |
Sed08g2877 | 768 | Pfam | PA domain | 396 | 469 | IPR003137 | - | |
Sed08g2877 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 213 | 226 | IPR015500 | - | |
Sed08g2877 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 552 | 568 | IPR015500 | - | |
Sed08g2877 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 140 | 159 | IPR015500 | - | |
Sed08g2877 | 768 | Gene3D | - | 347 | 491 | - | - | |
Sed08g2877 | 768 | CDD | Peptidases_S8_3 | 109 | 588 | IPR034197 | - | |
Sed08g2877 | 768 | Gene3D | Peptidase S8/S53 domain | 142 | 635 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed08g2877 | 768 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 111 | IPR037045 | - | |
Sed08g2877 | 768 | FunFam | subtilisin-like protease SBT1.5 | 347 | 491 | - | - | |
Sed08g2877 | 768 | SUPERFAMILY | PA domain | 402 | 488 | IPR046450 | - | |
Sed08g2877 | 768 | Pfam | Subtilase family | 141 | 593 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed08g2877 | 768 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 553 | 563 | IPR023828 | - | |
Sed08g2877 | 768 | FunFam | Subtilisin-like protease SBT5.3 | 20 | 111 | - | - | |
Sed08g2877 | 768 | FunFam | Subtilisin-like protease SBT1.5 | 142 | 359 | - | - | |
Sed08g2877 | 768 | Pfam | Fibronectin type-III domain | 667 | 765 | IPR041469 | - | |
Sed08g2877 | 768 | CDD | PA_subtilisin_like | 353 | 482 | - | - | |
Sed08g2877 | 768 | SUPERFAMILY | Protease propeptides/inhibitors | 29 | 107 | - | - | |
Sed08g2877 | 768 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 115 | 622 | - | - | |
Sed08g2877 | 768 | Gene3D | - | 639 | 767 | - | - | |
Sed08g2877 | 768 | SUPERFAMILY | Subtilisin-like | 110 | 626 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed08g2877 | Sed-Chr8:39916164 | Sed08g2884 | Sed-Chr8:39952090 | 6.70E-258 | dispersed | |
Sed08g2876 | Sed-Chr8:39910216 | Sed08g2877 | Sed-Chr8:39916164 | 5.30E-244 | tandem | |
Sed08g2877 | Sed-Chr8:39916164 | Sed08g2878 | Sed-Chr8:39924691 | 6.90E-263 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed08g2877 | - | - | - | 0.0 |