Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed08g2884 | ATGGATGCCTTCAATCTCTCTCCATGCTTTTTGATATTCATTCTTCTCACGTGTTCGCAAACATGCACCATTGCCACCAAAAAGCCTTACATTGTTTACTTGGGATCGCATTCTCCCGAGTTGAATACTACTTTGTCAAATCGTCGACGTATTACGGAGTCTCATTATGATTTATTGGAATCTGTGTTGGAAAGCAAAGAAGTAGCCAAAGAAGCAATATTCTACTCATACAACAGATTCATCAATGGCTTTGCTGCCATGCTGGATGAAAATCAAGCAGCTGATCTTGAAAATTTTCCAAATGTCGTTTCAGTTTTTGAATGTCAAGCTAGAAAATTGCACACAACGCGATCATGGAACTTTCTCGGAATGGAAGAACATGAAGAAACAACTTCGAACTCCATTTGGAATGTTGCGAAGTTTGGGGAAGATACAATCATAGCTAACTTCGACACAGGTGTTTGGCCAGAAGCAAAGAGCTTTAGTGATGAAGGGTATGGTCCTGTCCCCTCAAGGTGGAAGGGAACTTGTCAAAATGATACAGACCCCAGCTTCCATTGCAATAGGAAGTTGATTGGAGCAAGATACTTCAACAAAGGCTATGGTAACCTCACGGTTACCTTCAATTCTTCAAGAGACAATACAGGCCATGGAACCCACACTTTATCCATAGCTGGTGGCAATTTCTTACCCGGAGCTAATGTCTTCGGCATGGGCAATGGAACTGCCAAAGGTGGTTCCCCTCGAGCCCGCGTCGCATCCTACAAGGTTTGTTGGCCAGCAGAAGGTGGTGAGTGTTTGGACCCAAATACCTTAGCTGCCTATGAAGCTGCAATTAGCGATGGCGTTGACGTCATCTCGATTTCCGTCGGTGGACAGCCTAAAGAGTTTTTTAGTGATGCGCTCACTGTAGGAGCCTTTCATGCAGTTCAGCATGGTATTGTTGTTGTTTGCTCAGCTGGGAACTTAGGACCTACTTATGGGACTGTATCAAATGTGTCGCCATGGGTTCTAACTGTTGGAGCTAGTACCATTGATAGGGATTTCACCAGTTTTGTTGTCCTGGGGAACAAGATGAAACTCAAGGGAGCAAGCTTATCTTCTAAGGCATTGCCATTTGACAAGTTCTACCCTTTAATCAATGCTGTGGATGCAAAAGCCAACAATGTCTCTAATGATGATGCGGAAGATTGTAATGAGGGATCACTCGATCCCATGAAGTTGGCAGGGAAGATTGTGGTTTGCCGTCGAGGGGGTATTTCAAGAGTGTCCAAGGGCTATGTAGTTTCCCAAGCAGGGGCCGTCGGGATGATTTTGGTTAACGACGAGCACAACGGGAATGCATTAGTAACTGATCTGCACCTCCTTCCAGCTACCCATGTAACCTACAACGACAGCTTATCCATCATCGAATACATAAATTGCACAGTGAAGCCGATGGCTTACATCAGTGCTGAGCAGACAGAACTAGACATCAAACCATCCCCAGTAATGGCTGGTTTCTCATCAAGAGGCCCCAATACAATAGAGGAGTCAATCCTTAAGCCTGATATAACAGCACCAGGAGTGAATATAATAGCGGCTTACCCCGACAAAATACCGTTGACAGAAGTACCGATCGACGAGCATCGAGCTGCTTTCAAGGTAGATTCTGGCACATCCATGGCCTGCCCTCATGTTGCAGGCATTGTAGGCCTTCTCAAAACCCTAAATCCCAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACCACAGCCGAAACAAGAGACAATACCTTACGTCCAATCCTAGACTTCACCGAACGCGAAGCAACTCCATTTGCATACGGCGCCGGCCATGTTCATCCAAACCGTGCGATGGACCCGGGCCTCGTTTACGACACCACAATCGACGATTACCTAAATTTCATGTGTGCTCGAGGCTACAACGAAACACAGATCAACAAATTATCAAATAAGATGTTCGTTTGCGATCGTTCATTCAAAGTGACGGATCTAAATTACCCGTCGATCTCAGTGACGGATCTGAAATCGGGGCCTGTGACGATCAATCGGAAGCTGAAGAACGTGGGGAGTGCAGGGACGTATGTTGCAGAAGTGAAGGCGCCTTTGGAAGTTGAAATCACGGTTGAGCCGAGTACAATGGAATTTGCCGCCATTGATGAAGAGAAGAGCTTCAAGGTGGGGTTGCAGAGCACTGGAAAGGGAAAACCAAAGGGTTATGTGTTTGGGGAATTAATATGGTCTGATGGCAAACACCGTGTTAGGAGCCCAATTGCTGTTAATGTAGCCTAA | 2298 | 45.78 | MDAFNLSPCFLIFILLTCSQTCTIATKKPYIVYLGSHSPELNTTLSNRRRITESHYDLLESVLESKEVAKEAIFYSYNRFINGFAAMLDENQAADLENFPNVVSVFECQARKLHTTRSWNFLGMEEHEETTSNSIWNVAKFGEDTIIANFDTGVWPEAKSFSDEGYGPVPSRWKGTCQNDTDPSFHCNRKLIGARYFNKGYGNLTVTFNSSRDNTGHGTHTLSIAGGNFLPGANVFGMGNGTAKGGSPRARVASYKVCWPAEGGECLDPNTLAAYEAAISDGVDVISISVGGQPKEFFSDALTVGAFHAVQHGIVVVCSAGNLGPTYGTVSNVSPWVLTVGASTIDRDFTSFVVLGNKMKLKGASLSSKALPFDKFYPLINAVDAKANNVSNDDAEDCNEGSLDPMKLAGKIVVCRRGGISRVSKGYVVSQAGAVGMILVNDEHNGNALVTDLHLLPATHVTYNDSLSIIEYINCTVKPMAYISAEQTELDIKPSPVMAGFSSRGPNTIEESILKPDITAPGVNIIAAYPDKIPLTEVPIDEHRAAFKVDSGTSMACPHVAGIVGLLKTLNPKWSPAAIKSAIMTTAETRDNTLRPILDFTEREATPFAYGAGHVHPNRAMDPGLVYDTTIDDYLNFMCARGYNETQINKLSNKMFVCDRSFKVTDLNYPSISVTDLKSGPVTINRKLKNVGSAGTYVAEVKAPLEVEITVEPSTMEFAAIDEEKSFKVGLQSTGKGKPKGYVFGELIWSDGKHRVRSPIAVNVA | 765 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 39952090 | 39956931 | - | Sed0023220.1 | Sed08g2884 | 724660 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed08g2884 | 765 | Pfam | Peptidase inhibitor I9 | 30 | 114 | IPR010259 | - | |
Sed08g2884 | 765 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 552 | 562 | IPR023828 | - | |
Sed08g2884 | 765 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 118 | 621 | - | - | |
Sed08g2884 | 765 | FunFam | Subtilisin-like protease SBT1.5 | 144 | 363 | - | - | |
Sed08g2884 | 765 | FunFam | subtilisin-like protease SBT1.5 | 346 | 490 | - | - | |
Sed08g2884 | 765 | SUPERFAMILY | Subtilisin-like | 113 | 625 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed08g2884 | 765 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 17 | 114 | IPR037045 | - | |
Sed08g2884 | 765 | Pfam | Fibronectin type-III domain | 666 | 762 | IPR041469 | - | |
Sed08g2884 | 765 | FunFam | Subtilisin-like protease SBT5.3 | 19 | 114 | - | - | |
Sed08g2884 | 765 | FunFam | Subtilisin-like protease SBT1.5 | 638 | 765 | - | - | |
Sed08g2884 | 765 | CDD | PA_subtilisin_like | 353 | 483 | - | - | |
Sed08g2884 | 765 | Gene3D | - | 638 | 764 | - | - | |
Sed08g2884 | 765 | Gene3D | - | 346 | 490 | - | - | |
Sed08g2884 | 765 | SUPERFAMILY | PA domain | 399 | 466 | IPR046450 | - | |
Sed08g2884 | 765 | CDD | Peptidases_S8_3 | 112 | 587 | IPR034197 | - | |
Sed08g2884 | 765 | Gene3D | Peptidase S8/S53 domain | 144 | 634 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed08g2884 | 765 | Pfam | Subtilase family | 142 | 596 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed08g2884 | 765 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 30 | 760 | IPR045051 | - | |
Sed08g2884 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 142 | 161 | IPR015500 | - | |
Sed08g2884 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 213 | 226 | IPR015500 | - | |
Sed08g2884 | 765 | PRINTS | Subtilisin serine protease family (S8) signature | 551 | 567 | IPR015500 | - | |
Sed08g2884 | 765 | Pfam | PA domain | 377 | 468 | IPR003137 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g2277 | Sed-Chr3:17157814 | Sed08g2884 | Sed-Chr8:39952090 | 3.60E-142 | dispersed | |
Sed08g2877 | Sed-Chr8:39916164 | Sed08g2884 | Sed-Chr8:39952090 | 6.70E-258 | dispersed | |
Sed08g2884 | Sed-Chr8:39952090 | Sed11g1173 | Sed-Chr11:27638466 | 5.70E-209 | dispersed | |
Sed08g2878 | Sed-Chr8:39924691 | Sed08g2884 | Sed-Chr8:39952090 | 3.10E-279 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed08g2884 | - | - | - | 0.0 |