Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g0043 | ATGGCTTCTCTTCTTAGAAAGCAAGCTATCAATGGCTGCTTTCTCCTCCTTTTCGGCCTCTCCCTCTCCCTCGCATCTCTCTCCCTCGCCGTCACCGATGCCGAAGTTTCGTTCCTCTCCGGCCATCAATTCTTGGCTCTGAAAGAACACGAAAAACTCCCCGAAAACCACAAATACGAAATCGACATTCCCGACACTTTTCCTAATGTGAGGTTGAAAAATGCTTATGTTGCCCTTCAAGCTTGGAAATTGGCCATGTATTCCGACCCTTTAAACACCACTGCCAATTGGGTTGGTGCCAAGGTGTGCTCTTACACTGGCGTTTTCTGTGAGGCTGCGCTTGATGACCCCAAAGTGGAGGTTGTGGCTGGCATTGACTTGAACCATGCTGACATTGCTGGCTACTTGCCGCCCGAGCTCGGCCTCTTGACGGATGTTGCTCTCTTCCATATCAACTCTAATAGGTTTTGCGGCATCATTCCTACTACAATGTCTAAGCTCACTCTCATGTTCGAGTTCGATGTCAGCAACAATCGCTTCGTCGGTCACTTCCCTTTCGTTGTCCTCGAATGGCCCAACCCTAAGTATCTCGATATTAGGTACAATGACTTTGAAGGAGAAGTTCCGCCTATGTTGTTTACGAAGACGTTTGATGCCATATTCTTGAACAATAATAGATTCACGTCGCTCATCCCGGACACCATAGGGAACTCTTCAGTCTCGGTTGTGTCGTTCGCCAACAACGAGTTCCATGGTTGCATTCCTAAAACCATTGGCCAAATGTCTAACCTCAATGAGATCCTCTTCCTCGGGAACAAGCTCGGTGGGTGCCTCCCGCCCGAGATTGGAAGCATGGGGAATTTGACAGTGTTTGATGTGAGCTCCAATGGTTTCGTCGGCGAGTTACCTAAATCCCTTTCGAAGCTCAAGAGTTTGGAGATTATAGATGTTAGTGACAATCAATTCAGGGGAACGGTATTTGGAGAGATATGCAAATTGCCCAAGTTGAAGAATTTTAATGTGTCGTTTAATTATTTTAATGGGGTAAATTCAGAGTGTGTGGAGAACAAAAAAATTGAGAATCTTTTTGATGATATTGAAAATTGTGCGGCGAATCGACCAAAACAAAGAGATAGTCAAAGTTGCAGCTCTGTTTTGAAGAAATCGGTTAATTGTGGAAATTGTGGTGGTTCGAACTCTGATCTTGATGATTCTAGTGAACAATCTCCGTCCCCGAGATATCGATCCCCACCACCTCCAATGATAAATATTGAATCTCCGCCGTCGCCGGTTCGATCTGAGTCTCCCCCGTTGTCGGACGAGTTCTCGCCGCCGACCTCGGTTCAATCCTTGCCACCTACTTCTGTTCCTTCCTTACCGCCGTCCTCGGCTCCATCCCTTCCGCCGTCCTCGGTTCCATCCCTACCGCCGTCCCCAGTCCAATCTCCTCTAACCCCAGTTCAATCTTTACCACCGACCCCAGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCACCTTCCCCAGTTCAATCCTTACCGCCTTCCCTGGTTCAATCCTTACCTCCGTCCCCGGTTCAATCCTTACCTCCGTCCCCGGTTCAATCCTTACCGCCGTCCTCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTATCGTCGTCCCCTGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCAGTTCAATCCCCGATGTCCTCAGTTCAATCCCCGTTGTCCCCGGTTCAATCCCCGTTGTCCCCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCATTGTCCTCGGTTCAATCCCCATTGTCCCCGGTTCAATCCCCATTGTCCTCGGTTCAATCCCCATTGTCCCCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCATTGTCCTCGGTTCAATCCCCGATGTCCCCGGTTCAATCCCCTCCATCCTTGGTTCAATCCCCTCCGTCCTCGGTTCAATCCCCTTTGTCCTCGGTTCAATCCCCTTTGTCCTCGGTTCAATCCCCTTTCTCCTCGGTTCAATCCCCTCCGACCTCGATTCAATCCCCTCCGACTTCGGTTCAATCCCCACCGATGTACTCTCCACCGATGTACTCTCCACCTCCACCCGTCCACTCCCCTCCTCCACCCGTTCATTCCCCACCTCCACCGGTTCATTCCCCACCTCCACCGGTGCACTCCCCACCTCCACCGGTCCACTCCCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCACCTCCGCCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCTCCACCGCCGGTCCACTCCCCACCTCCCTCGGTCCACTCCCCTCCACCACCGGTCCACTCCCCTCCACCACCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCTCCACCGCCGGTGCACTCCCCACCTCCCCCGGTGCACTCCCCACCTCCCCCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCTCCACCGCCGGTCCACTCCCCTCCACCGCCGGTCCACTCCCCACCTCCCCCGGTGCACTCCCCACCTCCCCCGGTGCACTCCCCACCTCCCCCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCACCTCCCCGGTCCACTCCCCTCCACCGCCCGTCCACTCCCCACCTCCCGGTCCACTCCCCACCTCCCCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCTCCTCCACCTGTCCACTCCCCACCTCCCCCGGTGCACTCCCCGCCCCCACCTGTGCACTCTCCGCCACCACCCATCTTTTCTCCTCCGCCACGGGTCTACTCTCCACCACCACGGGTCTACTCTCCACCACCGGTCCAATCTCCACCACCACTGGCTGCATCTCCTCCTCCTACCGGTGGTTCTTCGCCGCCGGCGTTCGACGACATCATCCTTCCACCGAACATTGGTTTCGAATATGCATCGCCACCTCCACCACTCTTCCCCGGCTACTGAGGGGTCTGCTCATCTTTAA | 3264 | 56.28 | MASLLRKQAINGCFLLLFGLSLSLASLSLAVTDAEVSFLSGHQFLALKEHEKLPENHKYEIDIPDTFPNVRLKNAYVALQAWKLAMYSDPLNTTANWVGAKVCSYTGVFCEAALDDPKVEVVAGIDLNHADIAGYLPPELGLLTDVALFHINSNRFCGIIPTTMSKLTLMFEFDVSNNRFVGHFPFVVLEWPNPKYLDIRYNDFEGEVPPMLFTKTFDAIFLNNNRFTSLIPDTIGNSSVSVVSFANNEFHGCIPKTIGQMSNLNEILFLGNKLGGCLPPEIGSMGNLTVFDVSSNGFVGELPKSLSKLKSLEIIDVSDNQFRGTVFGEICKLPKLKNFNVSFNYFNGVNSECVENKKIENLFDDIENCAANRPKQRDSQSCSSVLKKSVNCGNCGGSNSDLDDSSEQSPSPRYRSPPPPMINIESPPSPVRSESPPLSDEFSPPTSVQSLPPTSVPSLPPSSAPSLPPSSVPSLPPSPVQSPLTPVQSLPPTPVQSLPPSPVQSLPPSPVQSLPPSLVQSLPPSPVQSLPPSPVQSLPPSSVQSLPPSPVQSLPPSPVQSLPPSPVQSLPPSPVQSLPPSPVQSLSSSPVQSLPPSPVQSLPPSPVQSLPPSPVQSPMSSVQSPLSPVQSPLSPVQSPLSSVQSPLSSVQSPLSSVQSPLSSVQSPLSSVQSPLSPVQSPLSSVQSPLSPVQSPLSSVQSPLSSVQSPLSSVQSPLSSVQSPMSPVQSPPSLVQSPPSSVQSPLSSVQSPLSSVQSPFSSVQSPPTSIQSPPTSVQSPPMYSPPMYSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPSVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPRSTPLHRPSTPHLPVHSPPPRSTPHLPRSTPLLHLSTPHLPRCTPRPHLCTLRHHPSFLLRHGSTLHHHGSTLHHRSNLHHHWLHLLLLPVVLRRRRSTTSSFHRTLVSNMHRHLHHSSPATEGSAHL | 1087 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 356135 | 359508 | + | Sed0026732.1 | Sed09g0043 | 724807 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g0043 | 1087 | MobiDBLite | consensus disorder prediction | 580 | 595 | - | - | |
Sed09g0043 | 1087 | Gene3D | Ribonuclease Inhibitor | 117 | 369 | IPR032675 | - | |
Sed09g0043 | 1087 | MobiDBLite | consensus disorder prediction | 397 | 992 | - | - | |
Sed09g0043 | 1087 | MobiDBLite | consensus disorder prediction | 397 | 411 | - | - | |
Sed09g0043 | 1087 | Pfam | Leucine Rich Repeat | 287 | 309 | IPR001611 | GO:0005515(InterPro) | |
Sed09g0043 | 1087 | SUPERFAMILY | L domain-like | 88 | 357 | - | - | |
Sed09g0043 | 1087 | MobiDBLite | consensus disorder prediction | 596 | 613 | - | - | |
Sed09g0043 | 1087 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 235 | 327 | - | - | |
Sed09g0043 | 1087 | MobiDBLite | consensus disorder prediction | 777 | 985 | - | - | |
Sed09g0043 | 1087 | MobiDBLite | consensus disorder prediction | 412 | 434 | - | - | |
Sed09g0043 | 1087 | MobiDBLite | consensus disorder prediction | 450 | 579 | - | - | |
Sed09g0043 | 1087 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 14 | 929 | IPR051582 | - | |
Sed09g0043 | 1087 | MobiDBLite | consensus disorder prediction | 614 | 776 | - | - | |
Sed09g0043 | 1087 | FunFam | Leucine-rich repeat extensin-like protein 1 | 76 | 234 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g2625 | Sed-Chr1:20317195 | Sed09g0043 | Sed-Chr9:356135 | 3.60E-54 | dispersed | |
Sed09g0043 | Sed-Chr9:356135 | Sed12g1856 | Sed-Chr12:29807283 | 4.40E-37 | dispersed | |
Sed09g0043 | Sed-Chr9:356135 | Sed11g0071 | Sed-Chr11:675560 | 4.90E-36 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g0043 | - | - | - | 0.0 |