Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0043 ATGGCTTCTCTTCTTAGAAAGCAAGCTATCAATGGCTGCTTTCTCCTCCTTTTCGGCCTCTCCCTCTCCCTCGCATCTCTCTCCCTCGCCGTCACCGATGCCGAAGTTTCGTTCCTCTCCGGCCATCAATTCTTGGCTCTGAAAGAACACGAAAAACTCCCCGAAAACCACAAATACGAAATCGACATTCCCGACACTTTTCCTAATGTGAGGTTGAAAAATGCTTATGTTGCCCTTCAAGCTTGGAAATTGGCCATGTATTCCGACCCTTTAAACACCACTGCCAATTGGGTTGGTGCCAAGGTGTGCTCTTACACTGGCGTTTTCTGTGAGGCTGCGCTTGATGACCCCAAAGTGGAGGTTGTGGCTGGCATTGACTTGAACCATGCTGACATTGCTGGCTACTTGCCGCCCGAGCTCGGCCTCTTGACGGATGTTGCTCTCTTCCATATCAACTCTAATAGGTTTTGCGGCATCATTCCTACTACAATGTCTAAGCTCACTCTCATGTTCGAGTTCGATGTCAGCAACAATCGCTTCGTCGGTCACTTCCCTTTCGTTGTCCTCGAATGGCCCAACCCTAAGTATCTCGATATTAGGTACAATGACTTTGAAGGAGAAGTTCCGCCTATGTTGTTTACGAAGACGTTTGATGCCATATTCTTGAACAATAATAGATTCACGTCGCTCATCCCGGACACCATAGGGAACTCTTCAGTCTCGGTTGTGTCGTTCGCCAACAACGAGTTCCATGGTTGCATTCCTAAAACCATTGGCCAAATGTCTAACCTCAATGAGATCCTCTTCCTCGGGAACAAGCTCGGTGGGTGCCTCCCGCCCGAGATTGGAAGCATGGGGAATTTGACAGTGTTTGATGTGAGCTCCAATGGTTTCGTCGGCGAGTTACCTAAATCCCTTTCGAAGCTCAAGAGTTTGGAGATTATAGATGTTAGTGACAATCAATTCAGGGGAACGGTATTTGGAGAGATATGCAAATTGCCCAAGTTGAAGAATTTTAATGTGTCGTTTAATTATTTTAATGGGGTAAATTCAGAGTGTGTGGAGAACAAAAAAATTGAGAATCTTTTTGATGATATTGAAAATTGTGCGGCGAATCGACCAAAACAAAGAGATAGTCAAAGTTGCAGCTCTGTTTTGAAGAAATCGGTTAATTGTGGAAATTGTGGTGGTTCGAACTCTGATCTTGATGATTCTAGTGAACAATCTCCGTCCCCGAGATATCGATCCCCACCACCTCCAATGATAAATATTGAATCTCCGCCGTCGCCGGTTCGATCTGAGTCTCCCCCGTTGTCGGACGAGTTCTCGCCGCCGACCTCGGTTCAATCCTTGCCACCTACTTCTGTTCCTTCCTTACCGCCGTCCTCGGCTCCATCCCTTCCGCCGTCCTCGGTTCCATCCCTACCGCCGTCCCCAGTCCAATCTCCTCTAACCCCAGTTCAATCTTTACCACCGACCCCAGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCACCTTCCCCAGTTCAATCCTTACCGCCTTCCCTGGTTCAATCCTTACCTCCGTCCCCGGTTCAATCCTTACCTCCGTCCCCGGTTCAATCCTTACCGCCGTCCTCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTATCGTCGTCCCCTGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCGGTTCAATCCTTACCGCCGTCCCCAGTTCAATCCCCGATGTCCTCAGTTCAATCCCCGTTGTCCCCGGTTCAATCCCCGTTGTCCCCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCATTGTCCTCGGTTCAATCCCCATTGTCCCCGGTTCAATCCCCATTGTCCTCGGTTCAATCCCCATTGTCCCCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCGTTGTCCTCGGTTCAATCCCCATTGTCCTCGGTTCAATCCCCGATGTCCCCGGTTCAATCCCCTCCATCCTTGGTTCAATCCCCTCCGTCCTCGGTTCAATCCCCTTTGTCCTCGGTTCAATCCCCTTTGTCCTCGGTTCAATCCCCTTTCTCCTCGGTTCAATCCCCTCCGACCTCGATTCAATCCCCTCCGACTTCGGTTCAATCCCCACCGATGTACTCTCCACCGATGTACTCTCCACCTCCACCCGTCCACTCCCCTCCTCCACCCGTTCATTCCCCACCTCCACCGGTTCATTCCCCACCTCCACCGGTGCACTCCCCACCTCCACCGGTCCACTCCCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCACCTCCGCCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCTCCACCGCCGGTCCACTCCCCACCTCCCTCGGTCCACTCCCCTCCACCACCGGTCCACTCCCCTCCACCACCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCTCCACCGCCGGTGCACTCCCCACCTCCCCCGGTGCACTCCCCACCTCCCCCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCTCCACCGCCGGTCCACTCCCCTCCACCGCCGGTCCACTCCCCACCTCCCCCGGTGCACTCCCCACCTCCCCCGGTGCACTCCCCACCTCCCCCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCACCTCCCCGGTCCACTCCCCTCCACCGCCCGTCCACTCCCCACCTCCCGGTCCACTCCCCACCTCCCCGGTCCACTCCCCACCTCCCCCGGTCCACTCCCCTCCTCCACCTGTCCACTCCCCACCTCCCCCGGTGCACTCCCCGCCCCCACCTGTGCACTCTCCGCCACCACCCATCTTTTCTCCTCCGCCACGGGTCTACTCTCCACCACCACGGGTCTACTCTCCACCACCGGTCCAATCTCCACCACCACTGGCTGCATCTCCTCCTCCTACCGGTGGTTCTTCGCCGCCGGCGTTCGACGACATCATCCTTCCACCGAACATTGGTTTCGAATATGCATCGCCACCTCCACCACTCTTCCCCGGCTACTGAGGGGTCTGCTCATCTTTAA 3264 56.28 MASLLRKQAINGCFLLLFGLSLSLASLSLAVTDAEVSFLSGHQFLALKEHEKLPENHKYEIDIPDTFPNVRLKNAYVALQAWKLAMYSDPLNTTANWVGAKVCSYTGVFCEAALDDPKVEVVAGIDLNHADIAGYLPPELGLLTDVALFHINSNRFCGIIPTTMSKLTLMFEFDVSNNRFVGHFPFVVLEWPNPKYLDIRYNDFEGEVPPMLFTKTFDAIFLNNNRFTSLIPDTIGNSSVSVVSFANNEFHGCIPKTIGQMSNLNEILFLGNKLGGCLPPEIGSMGNLTVFDVSSNGFVGELPKSLSKLKSLEIIDVSDNQFRGTVFGEICKLPKLKNFNVSFNYFNGVNSECVENKKIENLFDDIENCAANRPKQRDSQSCSSVLKKSVNCGNCGGSNSDLDDSSEQSPSPRYRSPPPPMINIESPPSPVRSESPPLSDEFSPPTSVQSLPPTSVPSLPPSSAPSLPPSSVPSLPPSPVQSPLTPVQSLPPTPVQSLPPSPVQSLPPSPVQSLPPSLVQSLPPSPVQSLPPSPVQSLPPSSVQSLPPSPVQSLPPSPVQSLPPSPVQSLPPSPVQSLPPSPVQSLSSSPVQSLPPSPVQSLPPSPVQSLPPSPVQSPMSSVQSPLSPVQSPLSPVQSPLSSVQSPLSSVQSPLSSVQSPLSSVQSPLSSVQSPLSPVQSPLSSVQSPLSPVQSPLSSVQSPLSSVQSPLSSVQSPLSSVQSPMSPVQSPPSLVQSPPSSVQSPLSSVQSPLSSVQSPFSSVQSPPTSIQSPPTSVQSPPMYSPPMYSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPSVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPRSTPLHRPSTPHLPVHSPPPRSTPHLPRSTPLLHLSTPHLPRCTPRPHLCTLRHHPSFLLRHGSTLHHHGSTLHHRSNLHHHWLHLLLLPVVLRRRRSTTSSFHRTLVSNMHRHLHHSSPATEGSAHL 1087
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 356135 359508 + Sed0026732.1 Sed09g0043 724807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0043 1087 MobiDBLite consensus disorder prediction 580 595 - -
Sed09g0043 1087 Gene3D Ribonuclease Inhibitor 117 369 IPR032675 -
Sed09g0043 1087 MobiDBLite consensus disorder prediction 397 992 - -
Sed09g0043 1087 MobiDBLite consensus disorder prediction 397 411 - -
Sed09g0043 1087 Pfam Leucine Rich Repeat 287 309 IPR001611 GO:0005515(InterPro)
Sed09g0043 1087 SUPERFAMILY L domain-like 88 357 - -
Sed09g0043 1087 MobiDBLite consensus disorder prediction 596 613 - -
Sed09g0043 1087 FunFam Leucine-rich repeat receptor protein kinase EMS1 235 327 - -
Sed09g0043 1087 MobiDBLite consensus disorder prediction 777 985 - -
Sed09g0043 1087 MobiDBLite consensus disorder prediction 412 434 - -
Sed09g0043 1087 MobiDBLite consensus disorder prediction 450 579 - -
Sed09g0043 1087 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 929 IPR051582 -
Sed09g0043 1087 MobiDBLite consensus disorder prediction 614 776 - -
Sed09g0043 1087 FunFam Leucine-rich repeat extensin-like protein 1 76 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2625 Sed-Chr1:20317195 Sed09g0043 Sed-Chr9:356135 3.60E-54 dispersed
Sed09g0043 Sed-Chr9:356135 Sed12g1856 Sed-Chr12:29807283 4.40E-37 dispersed
Sed09g0043 Sed-Chr9:356135 Sed11g0071 Sed-Chr11:675560 4.90E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0043 - - - 0.0