Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0048 ATGTCTAAAGAAGAAAGTCCAAAAGCTAACAGAAGGACAACCCGGTCCTCTACGGGTGTTTTAAGGGATTGTGGTGAAACAAAGAAGATATGTGAACCGCATATTCCAACTTTTAATGATCTTGTTTTTGGAGAAGATACCATTAGTAAGGAAGATCTCTTATCTAGCTTTCCTGGACGTCGTACTCAAATTATCGAACTTCTTAACCTTTTGGGACCCCTGAATTTTCCCATGCTTCCCCTCTTTGTTTATGGTGGCACATCTTCTGGGAAAACTAGTGTCACTTTACAGATATTCCGCCATCTCAACCGTCCTTTTGTTTATTCAAGCTGTCGTACTTGTTATAGTTTACGAACTCTATTTGAGTCTATCCTGAATCAGTTATTACTTCATCAAAAAGATGCAGATAATGGATATTTGAGTGCCAAGCGTTGCGAAAAGCCATCAGATTTCGTTAACTTTCTTCGTGAAGCCTTAATTAAAGTTGTAAAAACTCTCCAGGGGGATGCAGGAAAGTTAAGGACCAAGAAGTTGCCAAGACAAGGGCATGGACATATGATCTATCTAATTTTTGACAACTTGGAACTTGTTAGAGATTGGGACAAGAGTTCAAGTGTATTACCTTTTCTGTTTAATCTCCACGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTTATCAGTAATACTTCTCCGGACACATATTATTCAAATATGGGCTACTTGGAGCCCATCCCTGTTTTTTTCTCTGAATACACAGAAGATGATCTTCGACAAATTTTTATGAGGAACCAAGCCAACCAAGAGATGTATTCTTCCTTTCTGAATGTTGTATTGCGGCCATTCTATAGAACTACTAGACAAGTGAATGAGCTCTCCATAGCTTTTTCATCATTGTATAAGACATTCCGTGATTCTTCAGGTGATCTGAACAATGTTCCCAATGAGTCCAGCAAGAGGACACGGTTCGGTCATTTTCAACCGCATATTGCTCCTGCTTTGAATCAGATATTTAAAATTTCATCTCAGCCTTCTGAAGTTAGTAATTTGAAGGAACCAAATAGAAAAGGTGGTAGTAAGAAGTTTGGTGGGTTTGACTCTTCTGAACACTTGGACTTTCACATGTCTACTTCTGCAAAATATCTTCTTCTTTCAGCCTTTCTTGCTTCAAGAAATCCAGCTACACTTGATGCATCACTGTTTGATTCAACCGGGGGCTGTAGTAGTCGAAAAAGGAAGAAGAGGCCATCTGAAAAATCAATCGAACAGAAGGAAATTTCAGAACAGGAGTTGCTTATGAAAGGACCTGGAACTTTTCCCCTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTGGCAGAAATCTCATTTGAAGACGAGCAAGGAAATGTTGAAATGGAATGTCAAAGTGAGGATAATGAACTCATGTCTGATGTTCTCTTGCAACTTTCCAGCCTCTGCAATGCAAATTTTGTGGTCAAAGGAGGAAGTTGCCCACTAGAAGGCTCAACTCGATATCGCTCTACAGTGTCCGAAGATATGGCTTTGAAGGTAGCAAGGAGTATTAAGTTTCCCCTGTCCAAGTACATGTACAGAAGATAA 1608 39.43 MSKEESPKANRRTTRSSTGVLRDCGETKKICEPHIPTFNDLVFGEDTISKEDLLSSFPGRRTQIIELLNLLGPLNFPMLPLFVYGGTSSGKTSVTLQIFRHLNRPFVYSSCRTCYSLRTLFESILNQLLLHQKDADNGYLSAKRCEKPSDFVNFLREALIKVVKTLQGDAGKLRTKKLPRQGHGHMIYLIFDNLELVRDWDKSSSVLPFLFNLHEVLNMNEVGFLFISNTSPDTYYSNMGYLEPIPVFFSEYTEDDLRQIFMRNQANQEMYSSFLNVVLRPFYRTTRQVNELSIAFSSLYKTFRDSSGDLNNVPNESSKRTRFGHFQPHIAPALNQIFKISSQPSEVSNLKEPNRKGGSKKFGGFDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGCSSRKRKKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAEISFEDEQGNVEMECQSEDNELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARSIKFPLSKYMYRR 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 390122 394624 + Sed0000605.1 Sed09g0048 724812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0048 535 MobiDBLite consensus disorder prediction 403 424 - -
Sed09g0048 535 Pfam AAA ATPase domain 57 216 IPR041664 -
Sed09g0048 535 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 375 532 IPR047088 -
Sed09g0048 535 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 49 534 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Sed09g0048 535 FunFam Origin of replication complex subunit 5 57 238 - -
Sed09g0048 535 Gene3D - 57 237 IPR027417 -
Sed09g0048 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 265 IPR027417 -
Sed09g0048 535 MobiDBLite consensus disorder prediction 407 424 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0048 K02607 - csv:101223023 915.99