Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0050 ATGGACGTGGGTTTGGCGTTGGTCATAGTAACGGCGGTAACGGCGTATCTGCTGTGGTTCACGTTCATTTCACGGTCGTTAAAAGGCCCTCAAATGTGGCCGTTGCTGGGCAGCCTGCCCGGACTCATCGAAAACTGCGACCGCTTACACGACTGGATCTCCGACAACCTCCGCGCGTGCGGCGGCACGTACCAAACCTGCATCTGGGCCTTCCCTTTCTTCGCCAAAAGGCAAGGCCTCGTGACCGTCACGTGCGACCCCAGAAACCTCGAACACATCCTCAAAACCCGGTTCGACAATTACCCGAAGGGTCCCACGTGGCAGGCCGTTTTTCACGAGCTCCTAGGCCAGGGGATCTTCAACTCCGACGGCGACACGTGGCTCTTCCAGAGAAAAACCGCCGCCTTGGAATTTACCACCAGGACCCTCCGCCAAGCCATGGCTCGCTGGGTCAGCCGAGCCATCAAGCTTCGCTTCTGCCCAATTCTCAAGGAAGCCGAGCTGAATTGCGAACCGATCGACCTTCAGGACGTGCTTCTTCGCCTCACTTTCGACAACATTTGCGGCTTGGCTTTCGGCAAGGATCCGATGACTTGCGCCCCGGGTTTCCCCGATAACGGCTTCGCCACGGCTTTCGATCGAGCCACCGAAGCCTCCTTGCAACGGTTCATTCTCCCAGAAGTTGTATGGAAATTCAGGAAATGGCTCCGGCTCGGAATGGAAGTCAGCTTGAGCCGAAGCCTGATCCATATAGAGGAGTATTTATCCAGTGTAATCGACTCACGTAAGCTCGAATTGCTTACTCAGCCCAAAGACGCCACGTCACACGACGATTTACTCTCCCGATTCATGAAGAAAAAGGAAAGCAACTACTCCGACTCGTTCCTCCGCCACGTGGCGCTTAACTTCATCCTAGCTGGACGTGACACGTCATCCGTCGCGTTGAGTTGGTTCTTCTGGTTGGTAACATTAAACCCAATCGTAGAGGAAAAAATCCTCCGTGAAATCTCCACCGTTCTGATGGAGACACGTGGCAGTAACATTCAATCGTGGCTGGATGAACCGCTGGGATTCGAAGAGATCGATCGCCTGGTTTATCTCAAAGCCGCTCTCACCGAAACCCTAAGACTGTACCCGTCGGTGCCGGAGGATTCGAAGCATGTGGTCGCCAACGACGTGCTGCCGGACGGAACCGTCGTGCCGGCGGGATCGTCGGTGACGTACTCGATCTATTCGACCGGAAGAATGAAGTCGATCTGGGGAGAAGACTGCCTCGAGTTCCGGCCGGAGCGGTGGCTGACGGCGGAGGGCGAGAAGTTCATACCGTACGATTCGTACAAATTCGTAGCGTTCAACGCCGGTCCGAGGATCTGTTTGGGGAAGGACTTGGCGTATTTGCAGATGAAGTCGATCGCGGCGGCGGTGCTGCTCCGGCACCGGCTGACGGTGGCGGCGGGGCATAGGGTGGAGCAGAAAATGTCGCTGACGCTGTTCATGAAGTACGGGCTGAAGGTGAACGTTCACCGGCGGAACTTGGAGGGAATTGTGGAAAGTATGAGGGGCAGAAACGGAATTTCGCGAGGGAACGACGCTCCGTTAGTCGCCGTTGTTAACTGTAACGGCGGGGTTAAATGA 1635 55.84 MDVGLALVIVTAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLIENCDRLHDWISDNLRACGGTYQTCIWAFPFFAKRQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKEAELNCEPIDLQDVLLRLTFDNICGLAFGKDPMTCAPGFPDNGFATAFDRATEASLQRFILPEVVWKFRKWLRLGMEVSLSRSLIHIEEYLSSVIDSRKLELLTQPKDATSHDDLLSRFMKKKESNYSDSFLRHVALNFILAGRDTSSVALSWFFWLVTLNPIVEEKILREISTVLMETRGSNIQSWLDEPLGFEEIDRLVYLKAALTETLRLYPSVPEDSKHVVANDVLPDGTVVPAGSSVTYSIYSTGRMKSIWGEDCLEFRPERWLTAEGEKFIPYDSYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHRVEQKMSLTLFMKYGLKVNVHRRNLEGIVESMRGRNGISRGNDAPLVAVVNCNGGVK 544
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 409158 411020 + Sed0024654.1 Sed09g0050 724814
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0050 544 FunFam Cytochrome P450 21 513 - -
Sed09g0050 544 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 Pfam Cytochrome P450 28 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed09g0050 544 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 SUPERFAMILY Cytochrome P450 21 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed09g0050 544 PANTHER CYTOCHROME P450 18 503 - -
Sed09g0050 544 CDD CYP86A 67 503 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g0770 Sed-Chr5:6106634 Sed09g0050 Sed-Chr9:409158 1.30E-217 dispersed
Sed08g1486 Sed-Chr8:29356077 Sed09g0050 Sed-Chr9:409158 5.70E-72 dispersed
Sed09g0050 Sed-Chr9:409158 Sed10g0443 Sed-Chr10:2777544 8.00E-88 dispersed
Sed05g1151 Sed-Chr5:12190102 Sed09g0050 Sed-Chr9:409158 5.20E-89 transposed
Sed07g0603 Sed-Chr7:4565135 Sed09g0050 Sed-Chr9:409158 4.80E-125 transposed
Sed04g2239 Sed-Chr4:36137951 Sed09g0050 Sed-Chr9:409158 8.90E-297 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0050 K15398 - csv:101221526 1034.25