Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g0098 | ATGGATAATTACGGTTCTTCGCCTTCATATCCATACCACAATCCGTATGCATATCCTCCTCTTGCAGCTCCTCCTCAATATCCACCACCTTCTCAATATCCTCCCCTTTCTCAATATCCACCTCCTTCTCAATATCCATCTCCTTCTCAATATCCATCTCCTTCTCAATATCCACCCCCTTCTCAATATCCACCTCCTCATTATTCACATCCAAATTCAGATCCATATGCACATCCTTATTTCCCTAATTACCCATATAACCCTTCATATGTCTCTCCCTTTGTATATCCCCCTTCTCAATATCCACCTCCCCATTCTACCCCTGTGCTTTATCCTTATTCTGATACCTCTTCTACTCATAGTAGTTCTAGGCCATCCATTCAATATCATAACAATTTTCAACATGGTACATCTCCATATCAGTATCAAGAATCTAATACCTACCCTCCACCTGAAAATCAATACCCACCTCGCCCTTCTCGTGTAAATAGCTTTTCTAGTCATTATAGGAATGATACTACTGATTCTGCCTCATCTGGTTTCCCGCCTGTTGATGATCTTTTGTCCAATGTACATTTGTCTGATCATCAACCAAATGCCCCTGCATCTCCCCCTGCACATGTGCCCGTACAACCCTCCGCTTCGTTATTGGCGAATGCGCCTCACAGTTCGAGATATGATCGGCAAAACCGGTTTTATGGTTTTCCAAATTTTTCGTTTTCTGGTTTCGGCACGGGGAATTCTAACCAAATGACTTCATCCAATAGAGGTTTGTTTTCCCTTTCAAGCTCATTCAGTGGGTCTAAACGTAGGCAAGACTTGCAGATTGTACCATTGCACAATAAAGCCTCGTTGAAAGTTTTGCTGTTACATGGAAACTTAGAGATATGGGTTAACGAGGCGAAAAACCTGCCAAATATGGACATGTTTCACAAAACCTTAGGGGATATGTTATCAAAATTACCGGGAAAAATCGAAGGACGTGTGAGTCATAAGATCACTAGCGATCCTTACGTATCGATCTCGGTAGCAAATGCAATAATCGGGAGGACGTTTGTTATCAGCAACAATGAAAATCCTATATGGAGGCAACATTTCTATGTTCCTGTTGCACATCATGCTGCTGAGGTAGTTTTTTTCGTTAAAGACAGTGATGTTGTTGGTTCACAACTAATAGGAACTGTAGTAATTCCTACAGAACAAATATATTCAGGCTCTATAATTGAGGGAACATTCCCAATCATGCAAAATGGGAAACAATGTAAACCTGGAGCTATTCTAAATGTTTCAATTCAATATACCCCAATGGAGAGGCTTAGTACTTATCATCATGGAGTAGGAGCTGGCCCTGATTATCAAGGAGTTCCTGATACATATTTCCCCCTTAGAAAGGGTGGAGCTGTGACTCTTTATCAAGATGCTCATGTTCCAGCTGGTCACCTTCCAACTTTTATGCTTGAAAATGGTACGTACTACGTACATGGGAAGTGTTGGAATGATATCTTCGATGCCGTGCGTCAGGCTCGGAGGTTGATTTACGTCACTGGGTGGTCGGTGTGGCATAAGGTGAAACTGGTTCGTGATACTGGCTATGGGACTGAGTGTACCCTTGGAGATCTCTTGAGGTCTAAGTCACAGGAAGGGGTGAGAGTTTTGCTTCTCATTTGGGATGATCCTACTTCTAGGAGCATTTTGGGGTATAAAACTGATGGTTTCATGCAAACCCACGATGAGGAAACTCGCCGTTTTTTCAAACATTCCTCTGTAAAAGTGATACTTTCTCCTCGTATGGCTGGAAAACGACATAGCTGGGTTAGGCAAAGGGAAGTTGGAACTATTTATACACACCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATAATAGCTTTTGTTGGAGGGCTGGATTTATGTGACGGGCGGTATGATACTCCATCTCATCCCATATTTCGAACACTTCAAACAGTACACAAGGATGATTACCACAATCCTACATACACGGGTAGTGTTGCTGGTTGTCCAAGAGAACCGTGGCATGATTTGCACAGCAAAATTGACGGTCCAGCAGCATATGATGTTTTGACGAACTTTGAGGAGCGATGGAAGAGAGCTACAAAACCTCACGGCTTAAAGAAGTTGAAATTTGAAGATGCTTTGCTGCGCATTGAAAGAATTCATGACATTATTGGAATTTCTGAATCTTACTGCACTAATGAAAATGACCCTGAATCATGGCATGTGCAGATTTTTCGCTCAATTGATTCAACTTCCGTTAAAGATTTCCCAAAGGAGCCAAAAGATGCGCCAAGCAGGAACCTTGTATGTGGAAAGAATATGCTGATTGACATGAGTATACACACAGCATATGTGAAAGCCATTAGAGCTGCCCAACATTACATTTATATAGAGAACCAATATTTTATTGGGTCATCCTTCAATTGGAATTCAAACAAAGATATAGGTGCTAACAATTTGATTCCAATGGAAATTGCACTAAAGATTGCCGATAAAATCAGAGCAAATGAGAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCCGAGGGCGTCCCAACGGCTGCTGCCACTCAGAGGATACTATTTTGGCAGTTCTTCGATATGCAGGATGATATATATTCATAA | 2661 | 41.6 | MDNYGSSPSYPYHNPYAYPPLAAPPQYPPPSQYPPLSQYPPPSQYPSPSQYPSPSQYPPPSQYPPPHYSHPNSDPYAHPYFPNYPYNPSYVSPFVYPPSQYPPPHSTPVLYPYSDTSSTHSSSRPSIQYHNNFQHGTSPYQYQESNTYPPPENQYPPRPSRVNSFSSHYRNDTTDSASSGFPPVDDLLSNVHLSDHQPNAPASPPAHVPVQPSASLLANAPHSSRYDRQNRFYGFPNFSFSGFGTGNSNQMTSSNRGLFSLSSSFSGSKRRQDLQIVPLHNKASLKVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMLSKLPGKIEGRVSHKITSDPYVSISVANAIIGRTFVISNNENPIWRQHFYVPVAHHAAEVVFFVKDSDVVGSQLIGTVVIPTEQIYSGSIIEGTFPIMQNGKQCKPGAILNVSIQYTPMERLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPAGHLPTFMLENGTYYVHGKCWNDIFDAVRQARRLIYVTGWSVWHKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVKVILSPRMAGKRHSWVRQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPSHPIFRTLQTVHKDDYHNPTYTGSVAGCPREPWHDLHSKIDGPAAYDVLTNFEERWKRATKPHGLKKLKFEDALLRIERIHDIIGISESYCTNENDPESWHVQIFRSIDSTSVKDFPKEPKDAPSRNLVCGKNMLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDIGANNLIPMEIALKIADKIRANERFAAYIVIPMWPEGVPTAAATQRILFWQFFDMQDDIYS | 886 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 721980 | 728787 | - | Sed0001664.3 | Sed09g0098 | 724862 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g0098 | 886 | Gene3D | Endonuclease Chain A | 488 | 725 | - | - | |
Sed09g0098 | 886 | Gene3D | C2 domain | 287 | 422 | IPR035892 | - | |
Sed09g0098 | 886 | MobiDBLite | consensus disorder prediction | 23 | 74 | - | - | |
Sed09g0098 | 886 | FunFam | Phospholipase D delta | 488 | 724 | - | - | |
Sed09g0098 | 886 | CDD | C2_plant_PLD | 286 | 434 | - | - | |
Sed09g0098 | 886 | Pfam | C2 domain | 292 | 413 | IPR000008 | - | |
Sed09g0098 | 886 | MobiDBLite | consensus disorder prediction | 158 | 180 | - | - | |
Sed09g0098 | 886 | ProSiteProfiles | C2 domain profile. | 270 | 412 | IPR000008 | - | |
Sed09g0098 | 886 | MobiDBLite | consensus disorder prediction | 110 | 149 | - | - | |
Sed09g0098 | 886 | MobiDBLite | consensus disorder prediction | 107 | 208 | - | - | |
Sed09g0098 | 886 | MobiDBLite | consensus disorder prediction | 23 | 72 | - | - | |
Sed09g0098 | 886 | Pfam | Phospholipase D Active site motif | 614 | 647 | IPR001736 | GO:0003824(InterPro) | |
Sed09g0098 | 886 | SMART | C2_3c | 293 | 411 | IPR000008 | - | |
Sed09g0098 | 886 | SUPERFAMILY | Phospholipase D/nuclease | 453 | 713 | - | - | |
Sed09g0098 | 886 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 290 | 435 | IPR035892 | - | |
Sed09g0098 | 886 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 612 | 647 | IPR001736 | GO:0003824(InterPro) | |
Sed09g0098 | 886 | PANTHER | PHOSPHOLIPASE D | 289 | 881 | IPR015679 | GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER) | |
Sed09g0098 | 886 | SUPERFAMILY | Phospholipase D/nuclease | 741 | 872 | - | - | |
Sed09g0098 | 886 | Gene3D | Endonuclease Chain A | 757 | 873 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed09g0096 | Sed-Chr9:718036 | Sed09g0098 | Sed-Chr9:721980 | 0.00E+00 | dispersed | |
Sed09g0098 | Sed-Chr9:721980 | Sed11g1112 | Sed-Chr11:26832157 | 2.70E-186 | dispersed | |
Sed09g0097 | Sed-Chr9:718036 | Sed09g0098 | Sed-Chr9:721980 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g0098 | K01115 | - | csv:101218942 | 1385.93 |