Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0123 ATGGCCGGAGGAGGTGAAGGAACGTCGCTGGAATTCACTCCGACGTGGGTCGTCGCCGCCGTCTGCACCGTCATAGTCGCCATTTCCTTCGCCTTGGAGCGCCTTCTTCACTTTCTCGGCGTTTACCTCAAGAAGAAGAATCAGAAACCGCTCAATGAAGCTCTACAGAAAGTTAAAGAAGAATTGATGCTTATGGGATTTATTTCGCTTCTGCTCACTGTATTTCAAGGCGCAATCTCTAAATTCTGTGTTCCTGCGAGTTTGACTGAGCATTTGCTTCCATGTAGTATTGGGGATAAACAGAAACAGAAACATAATGCTGGACATGACGAAACGAAGCATTTTCAAACGTTCTTTGTTTCGAGTATTTCTGGTACAGCTAGGCGTCTCTTAGCTGAGGAATCGGCTTCGCAGAATGGTTATTGTGCTCAGAAGAATAAGGTGCCATTGCTATCACTTGAAGCTTTGCATCATCTACATATTTTTATCTTCATCCTAGCTATCGTCCACGTGACATTTTGTGTTCTCACCGTAGTTTTTGGAGGATTGAGGATTCGTCAATGGAAGCATTGGGAGAAATCTACTGCACAAGAGAATTATGAAGCCGAACCAGCTCTAAAACCACAAGTCACCCATGTCCGTCAACATACTTTTATCAAAGACCACTTTTTGGGCATTGGTAAATTATCCCTTCTTAGTTGGATGCATTCCTTCTTCAAGCAATTTTATGCATCTGTAACAAAATCAGATTATGTGACGTTACGGCTTGGTTTCATTACGACACACTGCAAAGGAAACCCGAAGTTTAATTTTCACAAGTACATGATACGTGCACTTGAAGATGATTTCAAGCATGTCGTTGGTATCAGTTGGTATCTTTGGATCTTCGTAATTGTCTTCTTGCTCCTTAATATTCATGGTTGGCATACATATTTCTGGATATCATTCATTCCTCTTATCCTTCTGCTTGCTGTGGGAACGAAGCTGGAACATATTATAACCCAGCTGGCTCATGAAGTTGCAGAGAAGCATATAGCAATCGAAGGCGATCTCATAATCCAACCATCCGACGATCACTTTTGGTTTCAACGACCCCGTATTGTTCTCTTCTTGATCCATATTATACTTTTCCAAAACGCTTTCGAGATCGGATTCTTTTTCTGGATATGGGTTCAATATGGTTTCGACTCGTGCATCATGGGGCAAGTCCGCTATATCATTCCGAGGCTTATTATTGGGGTGTTTGTTCAGCTTCTTTGCAGTTACAGCACCCTACCGCTCTACGCCATTGTCACACAGATGGGAAGTTCTTTCAAGAAAGCAATATTTGATGAACACATACAAGTGGGCCTAGTTGGATGGGCACAAAAGGCAAAGAAAAAAAAGGGACAGAAGGCAGCAGCTGATGGCTCCAGCCCAGGAAACAAGGAATCAGGTTCTACTATGGGAATTCAGCTGGGAAATATTCTGCGCAAGTCTTCTGCACCAGGAGAAATTAAGCCTGAGGTTTCCAAATCAAATGATATTCCTTAA 1533 42.66 MAGGGEGTSLEFTPTWVVAAVCTVIVAISFALERLLHFLGVYLKKKNQKPLNEALQKVKEELMLMGFISLLLTVFQGAISKFCVPASLTEHLLPCSIGDKQKQKHNAGHDETKHFQTFFVSSISGTARRLLAEESASQNGYCAQKNKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVVFGGLRIRQWKHWEKSTAQENYEAEPALKPQVTHVRQHTFIKDHFLGIGKLSLLSWMHSFFKQFYASVTKSDYVTLRLGFITTHCKGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVIVFLLLNIHGWHTYFWISFIPLILLLAVGTKLEHIITQLAHEVAEKHIAIEGDLIIQPSDDHFWFQRPRIVLFLIHIILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFVQLLCSYSTLPLYAIVTQMGSSFKKAIFDEHIQVGLVGWAQKAKKKKGQKAAADGSSPGNKESGSTMGIQLGNILRKSSAPGEIKPEVSKSNDIP 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 962428 970723 + Sed0008379.1 Sed09g0123 724887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0123 510 PANTHER MLO-LIKE PROTEIN 1 2 477 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed09g0123 510 MobiDBLite consensus disorder prediction 489 510 - -
Sed09g0123 510 MobiDBLite consensus disorder prediction 463 482 - -
Sed09g0123 510 Pfam Mlo family 8 478 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g3882 Sed-Chr5:46290761 Sed09g0123 Sed-Chr9:962428 1.90E-99 dispersed
Sed05g3883 Sed-Chr5:46290761 Sed09g0123 Sed-Chr9:962428 3.10E-77 dispersed
Sed09g0123 Sed-Chr9:962428 Sed10g0516 Sed-Chr10:3360296 7.70E-109 dispersed
Sed01g3136 Sed-Chr1:55886123 Sed09g0123 Sed-Chr9:962428 1.90E-236 transposed
Sed04g2149 Sed-Chr4:35622715 Sed09g0123 Sed-Chr9:962428 1.60E-242 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0123 K08472 - csv:101211868 875.159