Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0258 ATGTGGTCTCTTTCAAGGCTCCTTTTTCTCAGCTTTTGCTTTGGCCTCTTCGTTTCAAGATCGAGTTCCGAAGATGACAATCGAAAGACGTATATTGTATACATGGGAAGTCATCCAAAGAACAAAATTTCAACTTCTTCTCATCATAAAAGAATGCTTCAAGAAACTATTGGCAGCACTTTTGCTCCACACTCATTACTCCACAGCTACAAGAGAAGCTTCAACGGTTTTGTCGTAAAGTTAACCGAAGCCGAAGTACAAAAAGTTTCAGAAATGAAGGGAGTGATATCAGTTTTTGAAAATGTAAGAAATGAATTGCACACAACAAGATCATGGGACTTCATGGGCTTGTCCCAACAAGCAAGTAGAGTACCAACAATTGAAAGTGATATCATTGTTGGAGTATTTGACAGTGGCATTTGGCCTGAATCACCTAGTTTTCTTGATGAAGGATATGGCCCACCACCAAATAAGTGGAAGGGTAGTTGTGAAATTTCAGCCAATTTCTCTTGTAACAACAAAATCATCGGAGCTCGATCATATCGCAGCAATGGTTTATATCCAGCAAACGATATTCAAGGACCAAGAGATTCAAATGGACATGGGACGCACACAGCATCGACAGTAGCAGGCGGGTTGGTAGGGCGAGCAAGCATGCTCGGTCTTGGCACTGGCACAGCAAGGGGAGGAGTCCCATCGGCACGAATCGCTGTGTACAAAATATGCTGGTCAGACGGCTGTTACGAGGCCGACATTCTTGCAGCGTTCGACGACGCCATTGCGGATGGGGTTGACATCATCTCTTTCTCGGTCGGAGGAAGTATCGTGAGAGATTACTTCAATGACTCGAAGGCGATTGGAACTTTCCATGCAATGCAGAAGGGAATTCTTACATCAATGTCTGCGGGGAACAATGGTCCGAGCCCTTCCACAATTGGAAACTTTTCGCCTTGGTCTTTGTCCGTGGCAGCCAGTACTACTGATAGGAGGTTTTTGAGTCAAGTTCAACTCGGAAATGGAAGAACAATCAATGGAGTCACTATTAATACATTTGATCTAAATGGAACACAATATCCATTGGTGTATGCCGGAGATATACCAAATGTCAATGCTGGCTTTAATGGATCTATGTCCAGATTTTGCTTGGAAAACTCAGTGGACAAGGAGTTAGTGAAGGGTAAAATTGCCCTTTGTGATTTGTTTGTACTTCCAACAAAAGTGAGTTCTTTAAAAGGTGCAATTGGGATAATAATGCAAGACACATCCCCAAAAGAGGTCACATTCCCTTTTCCCTTGCCAGTCTCCCACATTGGCATGCAAGCACAAGATCTCAATATTTCTACATATATCAACTTAACTAGCCTTCCAACAGCAACTATATTAAAAAGCATAGAAGGAAAGTATAAATCAACCCCTTTTGTTGCATCTTTCTCTTCAAGGGGCCCAAATCCAATAACCCCAGACATTCTTAAGCCAGATTTGAGTGGTCCAGGAGTTGAAATTCTTGCAGCATGGTCTCCTATAGGTTCACCTTCAGGAACTGAAGATGATGATAGAAATGTTTTTTATAATATAATTTCAGGGACATCAATGTCTTGCCCTCATGCTACAGCAGTTGCTGCATATGTTAAATCATTTCATCCTTCTTGGTCTCCTGCTGCACTTAAATCCGCTCTTATGACAACAGCATTTCCCATGAAAGCAGAGCTTAACCCTGATGCAGAATTTGCATATGGTTCGGGCCATTTAAATCCATTAGGTGCAGTAAACCCCGGATTGATTTACAACGCTACCGAAATCGACTACGTAAAATTCCTCTGCAGTCAAGGCTACAACACGACGCTACTCCAACTAGTCTCTGGAGATAACAATACATGTAATTCTCGAAGAGATTTCGACGGAGTTTTCAATCTAAACTACCCTTCATTTGCTCTTTCCACAACAATCTCAACATCCATCAACCAAGTTTACAAGAGAAGGGTCACAAATGTCGGGTCGTCGAATTCGACTTATAAAGCTTCAATCTTTGCTCCTTTGGGGCTTAATATTACAGTGAACCCTTCTGTTCTTAGGTTCATGGCTTTGGGAGAAGAGCAAAGTTTTGAGGTTACAATTGAAGGGTGTATTGATAGTGGCATCGCATCAGGTTCTTTGGTGTGGGATGATGGTCAGCATAAAGTTAGGAGCCCTATAACTGTCTTTGATGCTAATACATTGGTTAATTAG 2226 42.0 MWSLSRLLFLSFCFGLFVSRSSSEDDNRKTYIVYMGSHPKNKISTSSHHKRMLQETIGSTFAPHSLLHSYKRSFNGFVVKLTEAEVQKVSEMKGVISVFENVRNELHTTRSWDFMGLSQQASRVPTIESDIIVGVFDSGIWPESPSFLDEGYGPPPNKWKGSCEISANFSCNNKIIGARSYRSNGLYPANDIQGPRDSNGHGTHTASTVAGGLVGRASMLGLGTGTARGGVPSARIAVYKICWSDGCYEADILAAFDDAIADGVDIISFSVGGSIVRDYFNDSKAIGTFHAMQKGILTSMSAGNNGPSPSTIGNFSPWSLSVAASTTDRRFLSQVQLGNGRTINGVTINTFDLNGTQYPLVYAGDIPNVNAGFNGSMSRFCLENSVDKELVKGKIALCDLFVLPTKVSSLKGAIGIIMQDTSPKEVTFPFPLPVSHIGMQAQDLNISTYINLTSLPTATILKSIEGKYKSTPFVASFSSRGPNPITPDILKPDLSGPGVEILAAWSPIGSPSGTEDDDRNVFYNIISGTSMSCPHATAVAAYVKSFHPSWSPAALKSALMTTAFPMKAELNPDAEFAYGSGHLNPLGAVNPGLIYNATEIDYVKFLCSQGYNTTLLQLVSGDNNTCNSRRDFDGVFNLNYPSFALSTTISTSINQVYKRRVTNVGSSNSTYKASIFAPLGLNITVNPSVLRFMALGEEQSFEVTIEGCIDSGIASGSLVWDDGQHKVRSPITVFDANTLVN 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2064825 2072569 + Sed0024399.1 Sed09g0258 725022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0258 741 FunFam Subtilisin-like protease SBT1.5 130 349 - -
Sed09g0258 741 SUPERFAMILY Subtilisin-like 106 593 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed09g0258 741 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Sed09g0258 741 Pfam Peptidase inhibitor I9 30 107 IPR010259 -
Sed09g0258 741 Gene3D Peptidase S8/S53 domain 130 602 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed09g0258 741 Pfam Fibronectin type-III domain 637 733 IPR041469 -
Sed09g0258 741 ProSiteProfiles Serine proteases, subtilase domain profile. 111 589 - -
Sed09g0258 741 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Sed09g0258 741 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Sed09g0258 741 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Sed09g0258 741 Pfam Subtilase family 129 579 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed09g0258 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 107 IPR037045 -
Sed09g0258 741 Gene3D - 328 467 - -
Sed09g0258 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 731 IPR045051 -
Sed09g0258 741 CDD PA_subtilisin_like 335 460 - -
Sed09g0258 741 Gene3D - 606 735 - -
Sed09g0258 741 FunFam Subtilisin-like protease SBT5.3 19 107 - -
Sed09g0258 741 CDD Peptidases_S8_3 105 563 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g0478 Sed-Chr5:3265826 Sed09g0258 Sed-Chr9:2064825 0.00E+00 dispersed
Sed05g0479 Sed-Chr5:3276797 Sed09g0258 Sed-Chr9:2064825 0.00E+00 dispersed
Sed05g0480 Sed-Chr5:3289585 Sed09g0258 Sed-Chr9:2064825 7.1e-310 dispersed
Sed07g2519 Sed-Chr7:40875414 Sed09g0258 Sed-Chr9:2064825 2.20E-261 dispersed
Sed07g2520 Sed-Chr7:40885756 Sed09g0258 Sed-Chr9:2064825 8.90E-268 dispersed
Sed07g2521 Sed-Chr7:40895375 Sed09g0258 Sed-Chr9:2064825 3.10E-225 dispersed
Sed09g0258 Sed-Chr9:2064825 Sed10g1120 Sed-Chr10:12871406 1.50E-166 dispersed
Sed01g3262 Sed-Chr1:60756432 Sed09g0258 Sed-Chr9:2064825 1.40E-167 transposed
Sed04g3026 Sed-Chr4:41427031 Sed09g0258 Sed-Chr9:2064825 0.00E+00 transposed
Sed06g1980 Sed-Chr6:43922152 Sed09g0258 Sed-Chr9:2064825 6.40E-306 transposed
Sed04g2379 Sed-Chr4:37174613 Sed09g0258 Sed-Chr9:2064825 9.20E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0258 - - - 0.0