Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0264 ATGTTGGACGGTTTAGGAATCGGATCGGAGCAGTTGATGACCGGCGGTGGGCCGCGCTACGTTCCGATGCAATCGGAGCCACCGACGGCTTCTGCGACGATGTCGTCGTTCTTTTCGTTCCATCACGACGCTCCTGAGCCGACGAGGATTTTCGATGAGCTGCCGGAGGCTACGATCATCTCGGTGTCTCGACCTGATGTTGGCGATATCACTCCGGTTCTTCTTTCTTACACAATCGAGTGCCAGTACAAGCAGTTTAAATGGCGCATGTTGAAGAAAGCTTCGCATGTATTCTATTTGCATTTCGCATTAAAGAAACGGGCATTCATTGAGGAAATTCACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACACACAACAGTGCCCCAAGATGAGGATGGACCAGATGATGAGGCTGATCCTCTGCATAATGATGAAACATCTAAAAATAGGGATGTTCCATCCAGTGCTGCCCTGCCTATCATTCGTCCAGCCCTAGGAAGGCAACACTCTATGTCGGATAGAGCTAAGGTTGCAATGCAAGGGTATTTGAATCACTTCTTGAGCAACATGGATATTGTCAATTCTCGAGAGGTTTGCAGGTTCTTGGAAGTCTCTACGTTATCATTTTCACCGGAATATGGCCCAAAGTTGAAAGAGGATTATGTCATGGTGAAGCATCTACCTAAAATTGCAAAGGAAGACGACTCTAAGAAATGTTGTCTATGCCTGTGGTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTACTAAAACCTGGTTTTTTAGCCTTGTTGGGAGATCCTTTTGATACTCAGCCAATGGATATAATAGTTTTTGACGTTCTACCTACTTCTGATCGCAATGGAGATGGACGGGTATCTTTGGCTAAGGAAATTAAGGAGCCAAATCCATTACGACATTCATTTAAGGTGACATGTGGAAATAGGAATATTAGGATAAGAGCGAAGAATGGATCCAAGGTTAAGGACTGGGTTGCTGCAATTAATGATGCTGGGCTGAGGCCTCCTGAGGGCTGGTGCCATCCTCATCGTTTTGGTTCTTTTGCTCCTCCTAGGGGTTTGACTGACGATGGTAGTAAGGCTCAGTGGTTTATCGATGGTCAAGCAGCTTTTGAAGCTGTTGCCTTTTCCATTGAGCATGCAAAATCCGAGATTTTCATTTGTGGTTGGTGGCTTTGCCCAGAACTGTACCTGCGGCGTCCTTTTATTTCAAATGCTTCATCGCGGCTTGATGCTTTACTTGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAAATTAACAGTGTTTACAGCAAGAGAAAACTTCTCAGCATCCATGAGAATGTGAGAGTATTACGATACCCTGACCACTTCTCCAGTGGCGTGTACTTGTGGTCCCACCATGAAAAAATCGTTATTGTCGATCATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCAGAACATAAAGTTGGCGATTCTCCTTCTTCAGTGTGGCCTGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCTTGGGAAGCTACCATGAAAGATGAGTTGGATCGTGCAAAAAATCCTCGCATGCCTTGGCATGACGTCCACTGTGCACTTTGGGGACCACCTTGTCGAGACATAGCCAGACATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCATATGAGCAGGCCATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGGGGAATAGCATAGAGTTGGAGGTTGAAAAGAAGAGTCTTGAAAATTCTAAAGGAACAGTACAGGATTCATTTTCTCGGGGATCATCTTTTCGCGATATTCCATTGCTTTTGCCTCAAGAGCCTGATGTGGATGTTCAAAATGAAGGTCTAAAAATGAATGAAATGGAGCCCATTGCTAATCCCCTTGATCAGCCAAGTAAGATCAGCAGCGGTCTCTCCTTCTCTTTTAGGAAGATCAAAGTCGAACCAATAGGACCAGATATGCCTCTGAAAAGCTTCGTTGATGATCTTGACTATTTGGATTCCCATGGAAAGTTATCCGGAGATGGTAAAGCACATCATCGCGTCACAAGTTCAGATATGGAGTGGTGGGAAATGCAAGACAGGGGACATCTTGGTGGCTTCACGGATGAATCTGGACAAGTTGGTCCTTGTGCTTCATGTCGTTGCCAGGTCATCAGAAGTGTCAGTCAGTGGTCTGCTGGGACAAGCCAAAATGAAGAAAGCATTCATATTGCATATTGCTCTCTTATTGAAAAAGCAGAACATTTTATCTATATTGAGAATCAATTTTTTATATCAGGCCTTTCAGGAGACGACTCAATACGGAATCGTGTGTTAGACGCATTGTACCGCCGCATATTGAGAGCCTACCGTGAAAAGAAGATTTTTAGGGCTATTATTGTCATACCACTCTTACCTGGATTTCAGGGGGGTCTGGATGACAGTGGTGCTGCATCCGTTAGAGCTATAATGCACTGGCAGTATCGAACTATATGTCGAGGACCGAATTCGATATTCCATAATCTTTTTGATCTTCTTGGTTCAAAAGTTCATGATTATATTTCATTCTATGGCCTGAGAGCTTATGGTAAGCTCTTTGATGATGGTCCCGTGGCTACAAGCCAGGTGTACGTGCATAGTAAAATTATGATCGTTGATGATTGTATTGCTTTGATTGGTTCGGCTAACATCAACGACAGGAGTTTACTTGGTTCTAGGGATTCTGAGATTGCTATCGTTATTGAAGATAACGAACTTGTCGATTCACATATGGGAGGACAACCATGGAAAGCAGGAAAGTTTTGTTGGAGTCTTCGTCTCTCGCTTTGGTCCGAACATCTTGGTCTTCGTCCCGGACAGATCAATCAAATAGTTGATCCAGTTTCAGATTCAACCTACAAGAATATATGGATGGGAACGGCTAAGGCGAACACGACAATATACCAAGACGTTTTTTCTTGCTTACCAAACGATCTTATAAATTCCAGAGCGGGACTGAGACAAAGTGTCGCGTTTTGGAAAGAGAGACTGGGACACACCACAATAGATTTAGGAATTGCACCAGAGAGGCTTGAGTTTTACAAGAATGGAGAAATTGAAAGGATTGATCCAATGGAGAGATTAAGTTCAGTGAAAGGGCATCTTGTTTCCTTCCCATTGGAATTTCTCAACAAGGAAGATTTAAGACCTGTTTTCAATGAGAGTGAGTACTATGCATCTCAAGTTTTTCATTAA 3360 43.3 MLDGLGIGSEQLMTGGGPRYVPMQSEPPTASATMSSFFSFHHDAPEPTRIFDELPEATIISVSRPDVGDITPVLLSYTIECQYKQFKWRMLKKASHVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTTVPQDEDGPDDEADPLHNDETSKNRDVPSSAALPIIRPALGRQHSMSDRAKVAMQGYLNHFLSNMDIVNSREVCRFLEVSTLSFSPEYGPKLKEDYVMVKHLPKIAKEDDSKKCCLCLWFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDRNGDGRVSLAKEIKEPNPLRHSFKVTCGNRNIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTDDGSKAQWFIDGQAAFEAVAFSIEHAKSEIFICGWWLCPELYLRRPFISNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKIVIVDHHICFIGGLDLCFGRYDTPEHKVGDSPSSVWPGKDYYNPRESEPNSWEATMKDELDRAKNPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGNSIELEVEKKSLENSKGTVQDSFSRGSSFRDIPLLLPQEPDVDVQNEGLKMNEMEPIANPLDQPSKISSGLSFSFRKIKVEPIGPDMPLKSFVDDLDYLDSHGKLSGDGKAHHRVTSSDMEWWEMQDRGHLGGFTDESGQVGPCASCRCQVIRSVSQWSAGTSQNEESIHIAYCSLIEKAEHFIYIENQFFISGLSGDDSIRNRVLDALYRRILRAYREKKIFRAIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGPNSIFHNLFDLLGSKVHDYISFYGLRAYGKLFDDGPVATSQVYVHSKIMIVDDCIALIGSANINDRSLLGSRDSEIAIVIEDNELVDSHMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQINQIVDPVSDSTYKNIWMGTAKANTTIYQDVFSCLPNDLINSRAGLRQSVAFWKERLGHTTIDLGIAPERLEFYKNGEIERIDPMERLSSVKGHLVSFPLEFLNKEDLRPVFNESEYYASQVFH 1119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2120718 2133915 + Sed0021308.1 Sed09g0264 725028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0264 1119 SMART PH_update 224 352 IPR001849 -
Sed09g0264 1119 Coils Coil 106 126 - -
Sed09g0264 1119 FunFam Phospholipase 750 970 - -
Sed09g0264 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 916 943 IPR001736 GO:0003824(InterPro)
Sed09g0264 1119 Gene3D - 245 348 IPR011993 -
Sed09g0264 1119 Gene3D Endonuclease Chain A 371 608 - -
Sed09g0264 1119 Pfam PLD-like domain 918 963 IPR025202 -
Sed09g0264 1119 SUPERFAMILY Phospholipase D/nuclease 756 964 - -
Sed09g0264 1119 CDD PLDc_vPLD1_2_yPLD_like_2 776 960 - -
Sed09g0264 1119 Pfam Phospholipase D Active site motif 485 512 IPR001736 GO:0003824(InterPro)
Sed09g0264 1119 PIRSF PLD_euk 706 1119 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Sed09g0264 1119 PIRSF PLD_euk 61 635 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Sed09g0264 1119 PANTHER PHOSPHOLIPASE D 186 1100 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Sed09g0264 1119 Gene3D Endonuclease Chain A 729 972 - -
Sed09g0264 1119 CDD PH_PLD 201 348 - -
Sed09g0264 1119 SUPERFAMILY Phospholipase D/nuclease 330 605 - -
Sed09g0264 1119 SMART pld_4 916 943 IPR001736 GO:0003824(InterPro)
Sed09g0264 1119 SMART pld_4 485 512 IPR001736 GO:0003824(InterPro)
Sed09g0264 1119 ProSiteProfiles PH domain profile. 259 350 IPR001849 -
Sed09g0264 1119 SUPERFAMILY PH domain-like 254 348 - -
Sed09g0264 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 485 512 IPR001736 GO:0003824(InterPro)
Sed09g0264 1119 CDD PLDc_vPLD1_2_yPLD_like_1 378 522 - -
Sed09g0264 1119 MobiDBLite consensus disorder prediction 132 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g0264 Sed-Chr9:2120718 Sed14g1225 Sed-Chr14:21447685 4.40E-40 dispersed
Sed03g1936 Sed-Chr3:13444452 Sed09g0264 Sed-Chr9:2120718 0.00E+00 transposed
Sed04g1775 Sed-Chr4:32375482 Sed09g0264 Sed-Chr9:2120718 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0264 K01115 - csv:101211856 2077.75