Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0321 ATGAGAGCTTCAAATCATGGCTTCCCCCTCTTCTCTGTACTGTTTCTCAGTACTCTTCTTGCTCTTCAGCTCGTCGATGGCACTCTAGTCCATAACTTCTATAGGCATAGCTGTCCCGGAGTTGAGGACATCGTGCGCGACGTCACCTCTCGACTCACTGATTCGAATCCCGCTCTTGCAGCTCAACTCCTTCGACTTCATTACCATGACTGTTTTGTTCAGGGATGCGATGCATCGATTCTGTTAGATACTGTTGCAGGAATCCCATCTGAGAAGGAAGCGAGGCCGAATCTATCACTGTTAGGTTTCGACGCCATCGACACTATCAAATCCGAGGTCGAGAAGGCTTGCCCTGACGTTGTTTCTTGCGCCGACATTCTTGCCCTTGCTGCTCGTGACGCTTTCGAAAACCGATCGTTGTGGCCGGTCTTTACCGGACGAAGAGACGGAAGGTTCTCGACATCAACCGCAGTCACCGGGAATCTCCCGTCGCCGTTTGCCAATTTCACCACTCTGAAGGAAAACTTCGAGAAGAAAGGCCTTAACGTGAAAGATCTGGTGGTTTTATCAGGTGCTCATACCATTGGAGTAGCTCATTGTGGCTCATTCTCAAGGAGGCTCTACAACTTCACAGGCATAGGAGACTCAGATCCTTCACTAAATCCAGAATATGCCCAAAGCCTTAAAAGTCAATGTCCAAATCCAGCTGATTCTTCAATTACTGTAGAAATGGATCCAAGTAGTTCACTTTCATTTGACACTGATTATTTCAATATCCTCACACAAAACAAAGGTTTGTTTCAATCCGACGCCGCACTTCTCACCGACGCTTCGTCGTCCTCGATCGTTACGGAGCTGCAGAACCCGGGAGATTTCTTCTTTGGCTTTGCTACTTCCATGTTCAAGATGGGAGCCATTGAAGTTCTCACTGGAACTGATGGTGAAATTAGGAAGAAATGTCGTGTTGTTAATTAA 975 47.18 MRASNHGFPLFSVLFLSTLLALQLVDGTLVHNFYRHSCPGVEDIVRDVTSRLTDSNPALAAQLLRLHYHDCFVQGCDASILLDTVAGIPSEKEARPNLSLLGFDAIDTIKSEVEKACPDVVSCADILALAARDAFENRSLWPVFTGRRDGRFSTSTAVTGNLPSPFANFTTLKENFEKKGLNVKDLVVLSGAHTIGVAHCGSFSRRLYNFTGIGDSDPSLNPEYAQSLKSQCPNPADSSITVEMDPSSSLSFDTDYFNILTQNKGLFQSDAALLTDASSSSIVTELQNPGDFFFGFATSMFKMGAIEVLTGTDGEIRKKCRVVN 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2909361 2913687 + Sed0002864.1 Sed09g0321 725085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0321 324 Gene3D Peroxidase, domain 2 163 303 - -
Sed09g0321 324 FunFam Peroxidase 163 303 - -
Sed09g0321 324 ProSiteProfiles Plant heme peroxidase family profile. 28 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PANTHER PEROXIDASE 25-RELATED 30 320 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Sed09g0321 324 Gene3D - 32 324 - -
Sed09g0321 324 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 Pfam Peroxidase 45 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 SUPERFAMILY Heme-dependent peroxidases 29 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g0321 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Sed09g0321 324 CDD secretory_peroxidase 29 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed09g0321 324 FunFam Peroxidase 32 173 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2006 Sed-Chr5:33317271 Sed09g0321 Sed-Chr9:2909361 6.00E-83 dispersed
Sed05g3076 Sed-Chr5:41042886 Sed09g0321 Sed-Chr9:2909361 2.50E-76 dispersed
Sed09g0321 Sed-Chr9:2909361 Sed14g1158 Sed-Chr14:20964850 2.70E-67 dispersed
Sed09g0320 Sed-Chr9:2899926 Sed09g0321 Sed-Chr9:2909361 1.30E-146 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0321 K00430 - csv:101215642 437.958