Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0379 ATGGAGCTTTATCGTTCGCAGAGAAAATCTTCGACCACAACCACTTCCTCTACGAATCTTCCTCTCTACCGTTCTGCTCCTCCTCTCGAAGTCCGGCTTGAAGATTTTGAGCTTTACGCCATTGATCGTCTTCGAGTTCTTAAAGGAATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAAGTGGTTAGAGATTTGTGGAAAGCCAATATGAAACATCCACAAGCATCCCAGGTTGTGAACAAGGATATAATATCTCACTTTGTCCTGCGCCTTGTATACTGCAGAACGGAAGACTTGAGAAAATGGTTTCTTTCAATGGAAACTATGCTATTTCGACACCGTTTTCTGTCTAAAAGTCCTGAATCTCAGAAGAAGGTCTTTGCTGAGCTCGGCCTCTCATACAAAGCAATCACTCATGCAGAATCTGAGGCTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGTACCAAGTGCTGATGCAGTATACTATAAGGTACCATGGGAAGAAGTTCCAGAACTTGTGGCTGGCCGAAGGGTATTTCTCCATAAAGGATATGCATATATTGCTATTTATCAGGTGGTTTCCCTTGTTGCTACACAATTCCGCAGTTACCTTTCGAAGGCCCTAAGTCTGACAAACAGAAAATGGACAGCTACTATAAGAGAACAAGAGAAAGATCGGTTGACCCCTATTGTAGAAGCCCTTTGCACAAGCTACCTGGGTCCTGACTACTCACAGCCTAGAGAGTATGCTGATATATCAATAAAAGACCTTGACCAAACAGCTAAAAGCTCATTTCCTCTTTGCATGCGGCACCTATTTGAAAAGCTGAAAGAAGACCACCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTAAAGGGTGTTGGGTTGAAGCTTGATGATGCCCTTGCTTTCTGGAGAGCTGAATTCTCCCGGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACGGTATCAGGCATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCACCTTATTCCTGTCAAAGAATCATCTCAACAACACCTGGTGTTGGAGATCATCATGGATGCCCCTATAGACATTTCAGTGAAGACAACTTAAGAGCAGCACTCGGTAAAATGGGAGTAAATAACCGGGCAATGGAAGATGTAATGGACAAAGTGCGAAATAAGCATTATCAGTTGGCATGCACCTTGACATTTGAATCCATCCATGGCTCCTCTTGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAGGTCCAGCAAAAGAACAATTCAACAACCTCCTAG 1359 42.68 MELYRSQRKSSTTTTSSTNLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKSEEMEKVVRDLWKANMKHPQASQVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSKSPESQKKVFAELGLSYKAITHAESEAVKDKLVQVARLIGQPVPSADAVYYKVPWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTATIREQEKDRLTPIVEALCTSYLGPDYSQPREYADISIKDLDQTAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWRAEFSRRVGAERFDKEYAYGIRHNYGKEGKRVDYSPYSCQRIISTTPGVGDHHGCPYRHFSEDNLRAALGKMGVNNRAMEDVMDKVRNKHYQLACTLTFESIHGSSCDAGINHPNQYFIDSQKVQQKNNSTTS 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3407661 3417543 + Sed0021319.1 Sed09g0379 725143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0379 452 PANTHER DNA PRIMASE LARGE SUBUNIT 15 450 IPR007238 GO:0005658(PANTHER)|GO:0006269(InterPro)|GO:0006269(PANTHER)|GO:0006270(PANTHER)
Sed09g0379 452 MobiDBLite consensus disorder prediction 1 21 - -
Sed09g0379 452 Gene3D - 2 245 - -
Sed09g0379 452 Pfam Eukaryotic and archaeal DNA primase, large subunit 172 437 IPR007238 GO:0006269(InterPro)
Sed09g0379 452 CDD PriL_PriS_Eukaryotic 22 440 IPR016558 -
Sed09g0379 452 PIRSF DNA_primase_large 2 452 IPR016558 -
Sed09g0379 452 FunFam DNA primase large subunit 4 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0379 K02685 - csv:101217274 825.469