Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g0433 | ATGGGATCATGCCTATCTGGGGACCGGGATAATCGAACGATCGCTTATTCTGAGGTCGCTTCGACATCTCGCGATGATAGCGTCGTTACCCGAAGGAACTCCAAGTCGAAGATTACGAAGAAGGGTTCTTCTCCCTCTAGTGTCTCTTCGAGGGAGATGTCGCTTCATCGAGTTCCTGGACGGATGTTTTTGAATGGATCAACTGATCATGCAACGCTCTTTACTAGGCAAGGCAAGAAAGGCATCAATCAGGACGCTATGATTGTCTGGGAGAATTTTGGTTCAAAAGAAGATACAATCTTTTGCGGAGTCTTTGATGGACACGGTCCCTTTGGCCATATGGTTGCAAAGAAAGTCAGAGATTCTCTTCCTCTAAAACTTTGTGCTCAGTTAGAATTGGAAGCTACCAAAAATGAAGAGAAGAATGATGCGAGATGTCGAGTAACTCCACCAAGGCCGATTAACAAGGACTCCGGAACCTCGGGTTTTGATCTTGATCGTCAGGGAACTAACAATGACATTTATGTCATGTTGAAAGAGTCTTTTCTAAAGGCTTTTAAGGTGATGGACAAGGAGCTTAAACTACACCCATATGTTGATTCCTATAGCAGTGGTACAACATCAGTTGCTTTGGTCAAACAGGGTCGGGATCTTATCATCGGAAATGTTGGGGACTCGAGGGCTGTATTAGGTACCAGAGATAAATCTAACTCTCTCATTGCAGTTCAGTTGACTGTGGATCTCAAGCCAAATCTTCCAAGGGAAGCTGAAAGGATCAGACTTTGCAAAGGAAGAATCTTTGCTCTTCAAAATGAGCCTGGGATTTTTAGGGTTTGGCTTCCCAACAGTGATTCTCCTGGTCTTGCAATGGCCAGAGCCTTTGGAGATTTCTGCTTAAAAGACTTCGGCGTCATAGCTGTTCCTGATGTTTCTTATTATCATCTTACTGAGAAAGACGAGTTTGTGGTACTGGCTACAGATGGGGTTTGGGATGTTCTCTCAAATGAAGAAGTTGTGGCAATTGTTGCGTCTTCTCCGAGATCCTCCGCAGCTCGTAACCTTGTGGATTCGGCTACTCGAGCGTGGAAATTTAAGTACCCTACTACCAAGATGGATGATTGTGCTGTAGTCTGCCTGTACCTGGACTCTAGTGAGAGTTCTTCATTGACATCCAAAGAGCAGGAGTTCACCAAGGAAATTGAAACTTAG | 1209 | 44.58 | MGSCLSGDRDNRTIAYSEVASTSRDDSVVTRRNSKSKITKKGSSPSSVSSREMSLHRVPGRMFLNGSTDHATLFTRQGKKGINQDAMIVWENFGSKEDTIFCGVFDGHGPFGHMVAKKVRDSLPLKLCAQLELEATKNEEKNDARCRVTPPRPINKDSGTSGFDLDRQGTNNDIYVMLKESFLKAFKVMDKELKLHPYVDSYSSGTTSVALVKQGRDLIIGNVGDSRAVLGTRDKSNSLIAVQLTVDLKPNLPREAERIRLCKGRIFALQNEPGIFRVWLPNSDSPGLAMARAFGDFCLKDFGVIAVPDVSYYHLTEKDEFVVLATDGVWDVLSNEEVVAIVASSPRSSAARNLVDSATRAWKFKYPTTKMDDCAVVCLYLDSSESSSLTSKEQEFTKEIET | 402 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4325431 | 4331979 | + | Sed0004089.5 | Sed09g0433 | 725197 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g0433 | 402 | CDD | PP2Cc | 76 | 381 | IPR001932 | - | |
Sed09g0433 | 402 | Gene3D | - | 65 | 383 | IPR036457 | - | |
Sed09g0433 | 402 | ProSiteProfiles | PPM-type phosphatase domain profile. | 70 | 381 | IPR001932 | - | |
Sed09g0433 | 402 | MobiDBLite | consensus disorder prediction | 39 | 53 | - | - | |
Sed09g0433 | 402 | SMART | PP2C_4 | 59 | 379 | IPR001932 | - | |
Sed09g0433 | 402 | MobiDBLite | consensus disorder prediction | 142 | 163 | - | - | |
Sed09g0433 | 402 | Pfam | Protein phosphatase 2C | 84 | 359 | IPR001932 | - | |
Sed09g0433 | 402 | SUPERFAMILY | PP2C-like | 70 | 382 | IPR036457 | - | |
Sed09g0433 | 402 | PANTHER | PROTEIN PHOSPHATASE | 56 | 379 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Sed09g0433 | 402 | MobiDBLite | consensus disorder prediction | 21 | 54 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed09g0429 | Sed-Chr9:4325155 | Sed09g0433 | Sed-Chr9:4325431 | 2.00E-229 | dispersed | |
Sed09g0430 | Sed-Chr9:4325155 | Sed09g0433 | Sed-Chr9:4325431 | 2.00E-229 | dispersed | |
Sed09g0433 | Sed-Chr9:4325431 | Sed11g1235 | Sed-Chr11:28150901 | 6.20E-130 | dispersed | |
Sed09g0432 | Sed-Chr9:4325155 | Sed09g0433 | Sed-Chr9:4325431 | 8.70E-225 | tandem | |
Sed09g0433 | Sed-Chr9:4325431 | Sed09g0434 | Sed-Chr9:4325431 | 3.90E-225 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g0433 | - | - | - | 0.0 |