Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g0603 | ATGGGGAAGAAAGGATCTGGCAGCTCTTGGCTCACTGCTGTCAAAAGAGCCTTCAGATCTCCCTCTAAAGATGATGATGAAAAGGGGAGGGAGAAACGGCGGTGGATTTTTAGAAAACAGTCAAATCAGCACCAGGATACAGTCGCCGGCGTTCAAGCAGCGCCGCCTAAGCCGGAGGCTCCGGCGGAAGAGCAGAAACATGCCCTTGCCGCGGCTGAGGCTGCCATGGTGGCTGCCAGAGCGGCGGCTCAAGCTGTCCAGCTGGCTATGCCGGTCTCGGCTCGATTCGATCTTTATTGCCATGCTGCCATTGTGATTCAAACATCCTTTAGAGGATATTTAGCAAGGAGAGCACTCCGAGCGCTCAGGGGGCTAGTGAAGCTACAAGCATTGGTGAGAGGACACAACGTTCGGAAGCAAGCGAAGACGACGTTGCAATGCATGAAAGCATTAGTAAGAGTGCAAGAACAAGTACTGGACAACCGGATGCGACGCTCCCTCGAAGGAAGCCGGCGGTCCACCTTCAGCGACACGAACAGCAGCGTGTACGAATCGCGGTACGCTCACGATCATCACGTGACCGAAAGGAAGACTATGTGCATGTCAAGAGAAGGAAGCAGTGTGACAGAGGATTGGGATGAACGGTCTCACACAGTTGAAGAAGTTAAGGCAATGTTGCAACATAGAAGAGATGCTGCTTTGAATCGTGATAATATTTTGTCTCACTCATTTTCTCAACAGATATGGAGGACTGGAAAGAGCCCATCCATAGGAAACCAAGCAGAGCTCGAAGAAGCCCCGAAATGGCTTGACCAGTGGATGGGAAAAAAGCCATGGGAATGCAGGGCAAGAGCTTCCACAGATCACAGACCACAACCCCTCAAAACCCTCGAAATCGACACGTCTCGACCGTACTCGTACCTATCCCCCAACACCCTCCACACAACCAACAATTACCAAACTCAATCACAAAGATCCAACTCACTTTCATCCTCCTCCCCACTCCATAGAGCCCATCACCACCAGTTCCCCATCACCCCATCCCCCTCGAAATCCCGTCTGATCCCACAAGTCCGGTCCGCAAGCCCCCGCTGCATCAGGGATGATAGAAACCAAACCATCCACCAACATATTGCATCTAACACACCAAGTTTAAGATCCAAACATCACAATGGGAGTGGTATTTCACTGCCTAATTACATGGCAGCGACCGAGTCAGCCAAGGCTAGAGTGCGGTCGCAAAGCGCCCCGAGGCAGAGGCCGGCAACGCCGGAGAGGGAACGAGCTGGGTCGGCGAGGAAACGGTTGTCGTTTCCGGTACCGCCGGATCCGTACAGTCGAATGGTCGGGGTGTATGGGAATAGCATGAAGAGTCCAAGCTTTAAGAGTGTTTGTGGAAGGTTTGAGGAAAGGTCTATCTATTCTTCTTGCTACACAGAGAGCCATGGTGGAGAGGTTTCCCCATCTTCAACCACTGATCTCAGAAGGTGGTTGAGATGA | 1500 | 52.13 | MGKKGSGSSWLTAVKRAFRSPSKDDDEKGREKRRWIFRKQSNQHQDTVAGVQAAPPKPEAPAEEQKHALAAAEAAMVAARAAAQAVQLAMPVSARFDLYCHAAIVIQTSFRGYLARRALRALRGLVKLQALVRGHNVRKQAKTTLQCMKALVRVQEQVLDNRMRRSLEGSRRSTFSDTNSSVYESRYAHDHHVTERKTMCMSREGSSVTEDWDERSHTVEEVKAMLQHRRDAALNRDNILSHSFSQQIWRTGKSPSIGNQAELEEAPKWLDQWMGKKPWECRARASTDHRPQPLKTLEIDTSRPYSYLSPNTLHTTNNYQTQSQRSNSLSSSSPLHRAHHHQFPITPSPSKSRLIPQVRSASPRCIRDDRNQTIHQHIASNTPSLRSKHHNGSGISLPNYMAATESAKARVRSQSAPRQRPATPERERAGSARKRLSFPVPPDPYSRMVGVYGNSMKSPSFKSVCGRFEERSIYSSCYTESHGGEVSPSSTTDLRRWLR | 499 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7017003 | 7022481 | - | Sed0018114.1 | Sed09g0603 | 725367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g0603 | 499 | Coils | Coil | 62 | 82 | - | - | |
Sed09g0603 | 499 | PANTHER | IQ-DOMAIN 5-RELATED | 10 | 431 | - | - | |
Sed09g0603 | 499 | MobiDBLite | consensus disorder prediction | 302 | 337 | - | - | |
Sed09g0603 | 499 | ProSiteProfiles | IQ motif profile. | 123 | 150 | - | - | |
Sed09g0603 | 499 | Pfam | Protein of unknown function (DUF4005) | 362 | 459 | IPR025064 | - | |
Sed09g0603 | 499 | Gene3D | - | 97 | 152 | - | - | |
Sed09g0603 | 499 | MobiDBLite | consensus disorder prediction | 283 | 362 | - | - | |
Sed09g0603 | 499 | Pfam | IQ calmodulin-binding motif | 102 | 120 | IPR000048 | GO:0005515(InterPro) | |
Sed09g0603 | 499 | Pfam | IQ calmodulin-binding motif | 126 | 142 | IPR000048 | GO:0005515(InterPro) | |
Sed09g0603 | 499 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 82 | 144 | IPR027417 | - | |
Sed09g0603 | 499 | SMART | iq_5 | 98 | 120 | IPR000048 | GO:0005515(InterPro) | |
Sed09g0603 | 499 | SMART | iq_5 | 121 | 142 | IPR000048 | GO:0005515(InterPro) | |
Sed09g0603 | 499 | MobiDBLite | consensus disorder prediction | 18 | 40 | - | - | |
Sed09g0603 | 499 | ProSiteProfiles | IQ motif profile. | 101 | 127 | - | - | |
Sed09g0603 | 499 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Sed09g0603 | 499 | MobiDBLite | consensus disorder prediction | 479 | 499 | - | - | |
Sed09g0603 | 499 | MobiDBLite | consensus disorder prediction | 404 | 441 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed09g0603 | Sed-Chr9:7017003 | Sed14g0426 | Sed-Chr14:4402517 | 2.00E-24 | dispersed | |
Sed09g0603 | Sed-Chr9:7017003 | Sed03g0040 | Sed-Chr3:290565 | 6.30E-31 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g0603 | - | - | - | 0.0 |