Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0722 ATGGCTCGGAACGGGCATGTAATGCCGGTGGATCCACTGAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTCGATTGTTCGGGCTCGGGGACCGTTCTCGATGTCGACAAGTATGCGATTATGCATCGGGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACCATTTTGGGGCGTGAGAGGGCCATTGTTCTTAATCTTGAGCATATTAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCAACAGATGAGCTCGTCGTCCCCGTACTTGAGGAACTACAGAGGCGACTGCCTCCTTCTAATATCTTCCAGGATCAAATTCAAGAAGATGGGAAAGAGTATCAGGGTGGGCTACATGATGGTGAAGCTGAAGAAGATGAATCCCCATTTGAATTCCGTGCACTAGAGGTAGCTTTGGAATCTATATGTAGTTTTCTTGCTGCTCGCACAACTGAACTGGAAACTGCTGCTTATCCAGCTTTGGATGAACTTACTGCGAAGATTAGTAGCCGCAATTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCAAGGGTTCAAAAGGTAAGAGATGAGCTTGAGCAATTACTGGACGATGATGACGACATGGCAGACCTTTACTTGACAAGAAAGATGAGTTCATCTTCTCCTGTAAGTTGTTCTGGTCCTGCCAACTGGTTTCCTATCTCTCCTACCATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTATTGCAACTGTACATGGGGATGAGAATGACATCGAGCAGCTTGAAATGTTATTGGAGGCTTACTTTATGCAGATTGATGGTACATTGAACGAACTAACTACATTGCGAGAGTATATCGATGACACAGAAGATTATATCAATATCCAGCTCGACAATCATCGGAATCAACTCATTCAGTTGGAGCTGTTTCTAAGTTCTGGAACGGTTTGTCTGTCAGTCTATTCATTGGTGTGTGCAATATTTGGCATGAACATTCCGTACACTTGGAATGACAATCATGGATACATGTTTAAATGGGTTGTCATTGTTTCCGGAGTAGCCTGTGCTGTGCTGTTCGTCACAATTGTTTACTATTCTCGCCTCAAAGGTTTGGTGGGGTCTTGA 1167 44.04 MARNGHVMPVDPLKKKKQSSRNWILLDCSGSGTVLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPTDELVVPVLEELQRRLPPSNIFQDQIQEDGKEYQGGLHDGEAEEDESPFEFRALEVALESICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLTRKMSSSSPVSCSGPANWFPISPTIGSKISRASRASIATVHGDENDIEQLEMLLEAYFMQIDGTLNELTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSVYSLVCAIFGMNIPYTWNDNHGYMFKWVVIVSGVACAVLFVTIVYYSRLKGLVGS 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11925834 11943437 - Sed0027938.1 Sed09g0722 725486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0722 388 Gene3D - 6 94 - -
Sed09g0722 388 Gene3D Magnesium transport protein CorA, transmembrane region 100 318 - -
Sed09g0722 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 384 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Sed09g0722 388 FunFam Magnesium transporter MRS2-1 11 94 - -
Sed09g0722 388 Coils Coil 189 216 - -
Sed09g0722 388 CDD Mrs2_Mfm1p-like 23 385 IPR039204 -
Sed09g0722 388 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 324 376 IPR045863 -
Sed09g0722 388 Pfam Magnesium transporter MRS2-like 36 231 - -
Sed09g0722 388 Pfam Magnesium transporter MRS2-like 268 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g0722 Sed-Chr9:11925834 Sed13g0547 Sed-Chr13:3768900 1.40E-78 dispersed
Sed04g1953 Sed-Chr4:34210691 Sed09g0722 Sed-Chr9:11925834 3.40E-189 wgd
Sed05g0080 Sed-Chr5:431442 Sed09g0722 Sed-Chr9:11925834 1.80E-142 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0722 K16075 - csv:101203841 655.21