Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0735 ATGAGTGCCGGCGCGGCCACGTTCCGGTCTATTCTCGATAAACCCCTCAACCAGTTGACGGAGGATGACATTTCGCAGCTCACTCGTGAAGATTGTCGCAAATACCTAAAGGAAAAAGGAATGCGGCGGCCGTCGTGGAACAAATCTCAGGCGATCCAACAGGTTATTTCTCTCAAAGCATTGCTTGAACCTTGTGATGATTCCGGCGCCACTGCTCTTAGGAAGGTCGTCATTTCGCCTCCGGTGAACTCAAATCAAGACGACTCACCCAGAGAACCGAGTGATGATGCTCAGGTTACGGTGTCAGTTGATGAATCTGCGTATAGCAATGTGGAGACTGCAAAATCTACTCCTGAGGATCCACAGGCTGAACCAGACCACAAGGTCCCCAGTCCCAGAGATCAATGCGATACAGATCAAGTGGATGGCCAAATGACAATTTTCTATTGCGGGAAGGTGAATGTGTATGATGGAGTTCCACCCGATAAGGCATGGGCAATCATGCATCTTGCAGCTAGTCCAATTCATTTCCCTCAGAATCATCATCCCTTGGGTGGAACTGCTGCATGTCAGTCTCCACGTTGTCTTTTGCAGACTGCCCATGAGAGAGACGACTTTATTGCTCCTAGTGCCCCTATCTATCGTAATATGCATACAGAGAAGGTGGTTGAGTACCCTCAGCAGCTGCATGTAAAAGGAACCAGTACTCGAGATTCTGATGTTGAGGGTCAGGCGAGTCGGCAAGTTTCGTTACAGAGATATCTTGAAAAGCGAAAGGACAGGATTGTCTTCTTCTAG 798 48.62 MSAGAATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGATALRKVVISPPVNSNQDDSPREPSDDAQVTVSVDESAYSNVETAKSTPEDPQAEPDHKVPSPRDQCDTDQVDGQMTIFYCGKVNVYDGVPPDKAWAIMHLAASPIHFPQNHHPLGGTAACQSPRCLLQTAHERDDFIAPSAPIYRNMHTEKVVEYPQQLHVKGTSTRDSDVEGQASRQVSLQRYLEKRKDRIVFF 265
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 12767038 12772739 - Sed0024780.2 Sed09g0735 725499
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0735 265 MobiDBLite consensus disorder prediction 78 138 - -
Sed09g0735 265 SMART tify_2 138 173 IPR010399 -
Sed09g0735 265 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Sed09g0735 265 Pfam tify domain 144 172 IPR010399 -
Sed09g0735 265 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 263 IPR040390 GO:0005634(PANTHER)|GO:0009611(PANTHER)|GO:0031347(PANTHER)|GO:2000022(PANTHER)
Sed09g0735 265 Pfam Jas motif 245 263 IPR018467 -
Sed09g0735 265 MobiDBLite consensus disorder prediction 95 117 - -
Sed09g0735 265 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g0734 Sed-Chr9:12767038 Sed09g0735 Sed-Chr9:12767038 7.20E-148 tandem
Sed09g0735 Sed-Chr9:12767038 Sed09g0736 Sed-Chr9:12767038 5.20E-125 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
39558 PF06200 tify 2.20E-15 No_clan Sed TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0735 - - - 0.0