Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g0759 | ATGAGCACTGCTTCAACGACAAGCTTCGAATATGTCGAAGTTGATCCCACTGGAAGATATGGAAGATACAATGAAGTTCTTGGCAAAGGAGCCTCAAAGACAGTTTACAGAGCCTTCGATGAGTACGACGGCATGGAAGTGGCGTGGAATCAAGTGAAGCTCTACGATTTTCTTCGAACTCCTGAGGATCTGGAACGGCTGTACAGAGAAATCCATTTGTTAAAGGCTCTAAAACACAACAACATAATGAAATTCTGTTCTTCTTGGGTCGACACTGGCAACAGAAACATTAACTTTGTGACAGAGATGTTCACTTCTGGAACACTTCGACAATACAGGCTGAAGCACAAGAGAGTCAACATGAGAGCTGTGAAGCATTGGTTCAGACAGATTTTGAAAGGCCTTCATTATCTTCACAGCCATGATCCTCCTGTAATCCATAGAGATCTTAAATGTGATAACATTTTTGTTAACGGGAATCAAGGGGAAGTCAAGATTGGTGATCTTGGCCTTGCTGCTATTCTTCTCAAACCCTATGTTGCTCGTTGTGTTGGAACGCCTGAGTTTATGGCACCAGAGATTTATGAAGAGGAGTATAATGAATTGGTTGATATCTATTCATTTGGAATGTGTATTTTGGAAATGGTTACTTTTGAATATCCATACAGTGAATGCAACCACCCTGCTCAGATTTACAAGAAAGTTATTTCTGGGATGAAACCAGATGCTTTGTATAAGGTGAAGGACCTCGAGGTTCGGTGTTTCGTTGAGAAATGCTTGGCTACTGTATCAGCAAGGCCCTCTGCTAGGGAGCTTTTGAATGATCCTTTTCTTCAAATTGATGGCTATAATTCCTTGCTGGGGCCAATGGACTACTATTCAGAATATGCTGAAGTGAAAAACTCTCTTATTAGAGGGCCTCTTTATGGTCCTTTGGGTAATGGGTATGTGAATTATTATGGTAATGAAGCTGGGAATGTTTTGGATTACTGTCTGATCGCTATCGAAGCGGGCAAGATTGATCTTTTCTCTTGTCAAGAGGATGAGCATCTGGCCGATGCTGATATCACTATTAAAGGGAGAAGGAGAGGCGACGACGATGTATTTCTACGACTACGAATTGCAGATAAAGAAGATCGGTTTCGAAACATCTACTTCCCTTTTGATTTGGAGAATGACAGTGCTTTGAGTGTTGCAAATGAGATGGTTTCTGAGCTTGACATTACTAATCAAGATGTGAAGATGATTGCTGATATGATTGATGGGGAAATTGCTACATTGGTTCCAGAATGGAAGAGGGGAATAACCTTAGAGGAAACTTCAGATTGCACTGATTCTAATGTTTGTCACAGTTGTGCTTTAAATAGTAATCTCTTTAATCATGTTTCGACGCATAATCCCACGACGAAGAACCTGCACATTCTTCAGTGTTCTGAAGAGAATGGCTGTGCTTCCATCCATGGCCGTTTTGAAGAGATCACATATCAAATTGAAGGGTCTGAACAGGTCAATGGAGACGAAAACTTGCATCAAACATCAGAGAATTTGAGCGATATTCATTACGCCGATATTTGGGCACAACGAGATGGACCAGAGGTAATTTCTCATGAATCTAGAGAGGTTAGTTGCGGTGAATCACATGGAACATCGGAGCAGCCGAAACTCGAGAAGGATGGAAGAATTGTAAATGTGGACAATCATCAAACAGAACACCAAAGAAGAAACTCTAGCTCATCGAATCCTTCAGCGTCCTTCACCGAAGATCATGAGAACGAAATCCGACAAGAACTCAGATGGCTCAAGGCTAAATATCAATTGCAGTTGAGGGAGCTAAGGGATCAACAATTAGGAGTCAAAACCAAATCTCTAAGCTTGCACCCGAATCCCAACCTCGTCGAGGCCGACATTGGAGCTTCAATTTCATTGCTCTCACCAAACGTCAATGAAGCAAAAAATAGGGATCTCCTAGCATCTCTCTCCTTTGGCAAGAACATCACTTCACATTCCACCCATGTCACTGGTAACATTTCGGAAAATGCCGAAAATGAAAACGGATCGAGTAGTCCTGAGCTGATGTTCACAGCCAAGAGTTTCTACACAGGAACATTGCTTCCACATTCTCTTCAAAGAGCAACCTCCCTTCCAGTTGATGCCATAGATTTTTAG | 2166 | 41.87 | MSTASTTSFEYVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYDGMEVAWNQVKLYDFLRTPEDLERLYREIHLLKALKHNNIMKFCSSWVDTGNRNINFVTEMFTSGTLRQYRLKHKRVNMRAVKHWFRQILKGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILLKPYVARCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVISGMKPDALYKVKDLEVRCFVEKCLATVSARPSARELLNDPFLQIDGYNSLLGPMDYYSEYAEVKNSLIRGPLYGPLGNGYVNYYGNEAGNVLDYCLIAIEAGKIDLFSCQEDEHLADADITIKGRRRGDDDVFLRLRIADKEDRFRNIYFPFDLENDSALSVANEMVSELDITNQDVKMIADMIDGEIATLVPEWKRGITLEETSDCTDSNVCHSCALNSNLFNHVSTHNPTTKNLHILQCSEENGCASIHGRFEEITYQIEGSEQVNGDENLHQTSENLSDIHYADIWAQRDGPEVISHESREVSCGESHGTSEQPKLEKDGRIVNVDNHQTEHQRRNSSSSNPSASFTEDHENEIRQELRWLKAKYQLQLRELRDQQLGVKTKSLSLHPNPNLVEADIGASISLLSPNVNEAKNRDLLASLSFGKNITSHSTHVTGNISENAENENGSSSPELMFTAKSFYTGTLLPHSLQRATSLPVDAIDF | 721 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 14561273 | 14565090 | + | Sed0005253.1 | Sed09g0759 | 725523 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g0759 | 721 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed09g0759 | 721 | MobiDBLite | consensus disorder prediction | 535 | 589 | - | - | |
Sed09g0759 | 721 | Gene3D | Transferase(Phosphotransferase) domain 1 | 104 | 283 | - | - | |
Sed09g0759 | 721 | ProSiteProfiles | Protein kinase domain profile. | 21 | 278 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed09g0759 | 721 | FunFam | Probable serine/threonine-protein kinase WNK1 | 5 | 102 | - | - | |
Sed09g0759 | 721 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 10 | 614 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Sed09g0759 | 721 | Coils | Coil | 594 | 614 | - | - | |
Sed09g0759 | 721 | SMART | serkin_6 | 21 | 278 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed09g0759 | 721 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 279 | IPR011009 | - | |
Sed09g0759 | 721 | MobiDBLite | consensus disorder prediction | 535 | 572 | - | - | |
Sed09g0759 | 721 | FunFam | probable serine/threonine-protein kinase WNK9 | 104 | 283 | - | - | |
Sed09g0759 | 721 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 370 | 424 | IPR024678 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
Sed09g0759 | 721 | Gene3D | Phosphorylase Kinase; domain 1 | 6 | 102 | - | - | |
Sed09g0759 | 721 | CDD | STKc_WNK | 19 | 278 | - | - | |
Sed09g0759 | 721 | Gene3D | - | 367 | 457 | - | - | |
Sed09g0759 | 721 | Pfam | Protein kinase domain | 24 | 278 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g1905 | Sed-Chr4:33788917 | Sed09g0759 | Sed-Chr9:14561273 | 0.00E+00 | dispersed | |
Sed09g0759 | Sed-Chr9:14561273 | Sed11g0251 | Sed-Chr11:2244660 | 9.90E-211 | dispersed | |
Sed09g0759 | Sed-Chr9:14561273 | Sed09g0760 | Sed-Chr9:14561273 | 0.00E+00 | tandem | |
Sed05g3346 | Sed-Chr5:42770115 | Sed09g0759 | Sed-Chr9:14561273 | 1.90E-128 | transposed | |
Sed04g1904 | Sed-Chr4:33788917 | Sed09g0759 | Sed-Chr9:14561273 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
79758 | PF00069 | Pkinase | 1.20E-48 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g0759 | K08867 | - | csv:101210511 | 1145.18 |