Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0759 ATGAGCACTGCTTCAACGACAAGCTTCGAATATGTCGAAGTTGATCCCACTGGAAGATATGGAAGATACAATGAAGTTCTTGGCAAAGGAGCCTCAAAGACAGTTTACAGAGCCTTCGATGAGTACGACGGCATGGAAGTGGCGTGGAATCAAGTGAAGCTCTACGATTTTCTTCGAACTCCTGAGGATCTGGAACGGCTGTACAGAGAAATCCATTTGTTAAAGGCTCTAAAACACAACAACATAATGAAATTCTGTTCTTCTTGGGTCGACACTGGCAACAGAAACATTAACTTTGTGACAGAGATGTTCACTTCTGGAACACTTCGACAATACAGGCTGAAGCACAAGAGAGTCAACATGAGAGCTGTGAAGCATTGGTTCAGACAGATTTTGAAAGGCCTTCATTATCTTCACAGCCATGATCCTCCTGTAATCCATAGAGATCTTAAATGTGATAACATTTTTGTTAACGGGAATCAAGGGGAAGTCAAGATTGGTGATCTTGGCCTTGCTGCTATTCTTCTCAAACCCTATGTTGCTCGTTGTGTTGGAACGCCTGAGTTTATGGCACCAGAGATTTATGAAGAGGAGTATAATGAATTGGTTGATATCTATTCATTTGGAATGTGTATTTTGGAAATGGTTACTTTTGAATATCCATACAGTGAATGCAACCACCCTGCTCAGATTTACAAGAAAGTTATTTCTGGGATGAAACCAGATGCTTTGTATAAGGTGAAGGACCTCGAGGTTCGGTGTTTCGTTGAGAAATGCTTGGCTACTGTATCAGCAAGGCCCTCTGCTAGGGAGCTTTTGAATGATCCTTTTCTTCAAATTGATGGCTATAATTCCTTGCTGGGGCCAATGGACTACTATTCAGAATATGCTGAAGTGAAAAACTCTCTTATTAGAGGGCCTCTTTATGGTCCTTTGGGTAATGGGTATGTGAATTATTATGGTAATGAAGCTGGGAATGTTTTGGATTACTGTCTGATCGCTATCGAAGCGGGCAAGATTGATCTTTTCTCTTGTCAAGAGGATGAGCATCTGGCCGATGCTGATATCACTATTAAAGGGAGAAGGAGAGGCGACGACGATGTATTTCTACGACTACGAATTGCAGATAAAGAAGATCGGTTTCGAAACATCTACTTCCCTTTTGATTTGGAGAATGACAGTGCTTTGAGTGTTGCAAATGAGATGGTTTCTGAGCTTGACATTACTAATCAAGATGTGAAGATGATTGCTGATATGATTGATGGGGAAATTGCTACATTGGTTCCAGAATGGAAGAGGGGAATAACCTTAGAGGAAACTTCAGATTGCACTGATTCTAATGTTTGTCACAGTTGTGCTTTAAATAGTAATCTCTTTAATCATGTTTCGACGCATAATCCCACGACGAAGAACCTGCACATTCTTCAGTGTTCTGAAGAGAATGGCTGTGCTTCCATCCATGGCCGTTTTGAAGAGATCACATATCAAATTGAAGGGTCTGAACAGGTCAATGGAGACGAAAACTTGCATCAAACATCAGAGAATTTGAGCGATATTCATTACGCCGATATTTGGGCACAACGAGATGGACCAGAGGTAATTTCTCATGAATCTAGAGAGGTTAGTTGCGGTGAATCACATGGAACATCGGAGCAGCCGAAACTCGAGAAGGATGGAAGAATTGTAAATGTGGACAATCATCAAACAGAACACCAAAGAAGAAACTCTAGCTCATCGAATCCTTCAGCGTCCTTCACCGAAGATCATGAGAACGAAATCCGACAAGAACTCAGATGGCTCAAGGCTAAATATCAATTGCAGTTGAGGGAGCTAAGGGATCAACAATTAGGAGTCAAAACCAAATCTCTAAGCTTGCACCCGAATCCCAACCTCGTCGAGGCCGACATTGGAGCTTCAATTTCATTGCTCTCACCAAACGTCAATGAAGCAAAAAATAGGGATCTCCTAGCATCTCTCTCCTTTGGCAAGAACATCACTTCACATTCCACCCATGTCACTGGTAACATTTCGGAAAATGCCGAAAATGAAAACGGATCGAGTAGTCCTGAGCTGATGTTCACAGCCAAGAGTTTCTACACAGGAACATTGCTTCCACATTCTCTTCAAAGAGCAACCTCCCTTCCAGTTGATGCCATAGATTTTTAG 2166 41.87 MSTASTTSFEYVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYDGMEVAWNQVKLYDFLRTPEDLERLYREIHLLKALKHNNIMKFCSSWVDTGNRNINFVTEMFTSGTLRQYRLKHKRVNMRAVKHWFRQILKGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILLKPYVARCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVISGMKPDALYKVKDLEVRCFVEKCLATVSARPSARELLNDPFLQIDGYNSLLGPMDYYSEYAEVKNSLIRGPLYGPLGNGYVNYYGNEAGNVLDYCLIAIEAGKIDLFSCQEDEHLADADITIKGRRRGDDDVFLRLRIADKEDRFRNIYFPFDLENDSALSVANEMVSELDITNQDVKMIADMIDGEIATLVPEWKRGITLEETSDCTDSNVCHSCALNSNLFNHVSTHNPTTKNLHILQCSEENGCASIHGRFEEITYQIEGSEQVNGDENLHQTSENLSDIHYADIWAQRDGPEVISHESREVSCGESHGTSEQPKLEKDGRIVNVDNHQTEHQRRNSSSSNPSASFTEDHENEIRQELRWLKAKYQLQLRELRDQQLGVKTKSLSLHPNPNLVEADIGASISLLSPNVNEAKNRDLLASLSFGKNITSHSTHVTGNISENAENENGSSSPELMFTAKSFYTGTLLPHSLQRATSLPVDAIDF 721
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14561273 14565090 + Sed0005253.1 Sed09g0759 725523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0759 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed09g0759 721 MobiDBLite consensus disorder prediction 535 589 - -
Sed09g0759 721 Gene3D Transferase(Phosphotransferase) domain 1 104 283 - -
Sed09g0759 721 ProSiteProfiles Protein kinase domain profile. 21 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed09g0759 721 FunFam Probable serine/threonine-protein kinase WNK1 5 102 - -
Sed09g0759 721 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 614 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Sed09g0759 721 Coils Coil 594 614 - -
Sed09g0759 721 SMART serkin_6 21 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed09g0759 721 SUPERFAMILY Protein kinase-like (PK-like) 24 279 IPR011009 -
Sed09g0759 721 MobiDBLite consensus disorder prediction 535 572 - -
Sed09g0759 721 FunFam probable serine/threonine-protein kinase WNK9 104 283 - -
Sed09g0759 721 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 370 424 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Sed09g0759 721 Gene3D Phosphorylase Kinase; domain 1 6 102 - -
Sed09g0759 721 CDD STKc_WNK 19 278 - -
Sed09g0759 721 Gene3D - 367 457 - -
Sed09g0759 721 Pfam Protein kinase domain 24 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g1905 Sed-Chr4:33788917 Sed09g0759 Sed-Chr9:14561273 0.00E+00 dispersed
Sed09g0759 Sed-Chr9:14561273 Sed11g0251 Sed-Chr11:2244660 9.90E-211 dispersed
Sed09g0759 Sed-Chr9:14561273 Sed09g0760 Sed-Chr9:14561273 0.00E+00 tandem
Sed05g3346 Sed-Chr5:42770115 Sed09g0759 Sed-Chr9:14561273 1.90E-128 transposed
Sed04g1904 Sed-Chr4:33788917 Sed09g0759 Sed-Chr9:14561273 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79758 PF00069 Pkinase 1.20E-48 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0759 K08867 - csv:101210511 1145.18