Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g0998 ATGTCTCGAGCACAGAATTATGAGTTCCAAGAATGGTGGAACCAGCAAAGAGATAAGAATCATGACAAACCCTTACTAGAAAACTCCAACAAGTTCTCGACCTCACCTGCATTTTTGTCCGTTGAGATCCATGGAGATCGGACGGCGGATGAGGATCGAGCGAGGACCAGGAGTGCCCGCCAGATTTCTTGGGTTTGGCTGTTGAAGTTCCAGCAGATTGCTGGTTCTTTTGCTTCAATCACCAATGGGGTTGTTTATCTCATCCACACTGCCAATCGTCGGATCTCGTCGCCGAATTCGCCGGCCGATTCGGCCTCGTCTCGGCTCTACAAGATCATCAAAGTGTTTATGATAATAGTGATTCTGTTGCTTGTTTTTGAGCTTGTGGCTTACTTCAATGGCTGGCATTTCAGCCCCCCTTCTGTGGAATCAGCTTCTGCTGAGCTTCTTGGAATATTAGGGTTTGTTTATGCGAATTGGCTTGAGATTCGGGTTAATTACTTGGCTCCACCATTGCAGAGCTTGATCAATTTGTGCATTTTGTTGTTCTTGATCCAGTCTGTGGATCGTTTGGTTTTAATGTTGGGGTGTTTTTGGATCAAGTTCCGGAAATTGAAGCCCGTGGCGCCGTTTCAGTACCCGGCCTCGGATGAGAATGCTGCTAGTTCTGAGGATTATCCTATGGTGTTGGTGCAGATTCCTATGTGCAATGAGAGGGAGGTTTACCAACAATCTATTGCAGCTGTTTGTATCCAGGACTGGCCAAAGGATAAAATGCTTGTACAGGTTTTAGATGATTCTGATGAGCTAGATGTTCAACAACTTATCAAGGCTGAAGTACAAAAATGGCAACAGAGAGGTGTCCGCATATTGTATCGACACCGCCTCATACGTACGGGCTACAAGGCAGGGAATCTAAAATCTGCTATGGGGTGCGATTACGTAAAAGATTATGAGTTTGTGGCTATCTTCGATGCAGATTTTCAGCCAGGACCGGACTTTTTGAAGAAAACTATTCCACATTTCAAGGGTAATGATGAACTTGCATTGGTCCAAACAAGGTGGTCATTTGTGAACAAGGACGAAAACTTGCTCACAAGACTGCAGAACATAAATTTATCCTTCCATTTTGAGGTTGAGCAGCAAGTAAATGGCATGTTTATCAACTTTTTTGGTTTCAATGGAACTGCTGGAGTCTGGAGAATTAAAGCTCTGGAAGAATGTGGGGGCTGGTTAGAAAGAACAACTGTTGAGGACATGGATGTTGCGGTCCGTGCCCATCTTTGTGGCTGGAAGTTCATATATTTAAATGATGTGAAGTGCCTTTGTGAACTTCCGGAATCATACGAAGCATACAAGAAACAACAACATCGATGGCATTCAGGCCCAATGCAGTTATTTCGTTTGTGCTTCTCTGATATACTCAAAGCAAAGGTGAGTTGGAAGAAGAAAGCTAATTTGATTTTTCTTTTCTTCCTCCTGCGAAAGCTCGTCCTTCCCTTCTATTCCTTTACCTTGTTCTGCATTATTCTCCCCTTGACCATGTTCCTTCCAGAAGCTCATCTACCCGCTTGGGTCGTTTGCTACGTTCCCGGGTTCATGTCCATCTTAAATATCCTCCCTTCGCCGCAGTCGTTTCCTTTTATAGTCCCCTATCTTCTCTTTGAAAACACCATGTCTGTTACCAAATTCAATGCCATGATATTAGGATTATTCCGCTTTAGAAGCTCATATGAATGGATAGTAACAAAGAAACTTGGAAGATCATCTGAAAACGACCTTGTTGCTTTCGAAAAAGAACAAGAACCTCTAGTTCAAGGTACAGGTCTTCATCGATCGTCCTCAGAATCAGGTCTTCAGGACCTGACCAGGCTCGAGTTATCGAAAAAAGCAGGGAAAAGCAAAAGAAATCGTCTGTACAGGAAGGAGTTGGCCCTTGCATTCATTTTGTTAACTGCCTCGGTGAGAAGTTTGTTATCTGCACAAGGAATTCACTTTTACTTCCTATTATTTCAGGGTATCACTTTTCTAGCAGTCGGTCTCGATTTAATCGGAGAGCAAGTTAGTTAA 2070 43.48 MSRAQNYEFQEWWNQQRDKNHDKPLLENSNKFSTSPAFLSVEIHGDRTADEDRARTRSARQISWVWLLKFQQIAGSFASITNGVVYLIHTANRRISSPNSPADSASSRLYKIIKVFMIIVILLLVFELVAYFNGWHFSPPSVESASAELLGILGFVYANWLEIRVNYLAPPLQSLINLCILLFLIQSVDRLVLMLGCFWIKFRKLKPVAPFQYPASDENAASSEDYPMVLVQIPMCNEREVYQQSIAAVCIQDWPKDKMLVQVLDDSDELDVQQLIKAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPGPDFLKKTIPHFKGNDELALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGMFINFFGFNGTAGVWRIKALEECGGWLERTTVEDMDVAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILKAKVSWKKKANLIFLFFLLRKLVLPFYSFTLFCIILPLTMFLPEAHLPAWVVCYVPGFMSILNILPSPQSFPFIVPYLLFENTMSVTKFNAMILGLFRFRSSYEWIVTKKLGRSSENDLVAFEKEQEPLVQGTGLHRSSSESGLQDLTRLELSKKAGKSKRNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGITFLAVGLDLIGEQVS 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 32853630 32861241 + Sed0009473.1 Sed09g0998 725762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g0998 689 FunFam probable xyloglucan glycosyltransferase 5 220 445 - -
Sed09g0998 689 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 154 688 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Sed09g0998 689 SUPERFAMILY Nucleotide-diphospho-sugar transferases 226 505 IPR029044 -
Sed09g0998 689 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 217 445 IPR029044 -
Sed09g0998 689 Pfam Glycosyl transferase family group 2 321 522 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g0998 Sed-Chr9:32853630 Sed13g1835 Sed-Chr13:23255083 2.60E-245 dispersed
Sed07g0261 Sed-Chr7:2107190 Sed09g0998 Sed-Chr9:32853630 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g0998 - - - 0.0