Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1177 ATGGCTGGGAGTAATGAAGTCAACCTTAGTGAATCTAAGAGAGTTGTTCCACTTAATACATGGGTGCTTATCTCCAATTTCAAGCTAGCTTACACCATTCTTCGCCGTGCGGACGGTACCTTCAACCGGGAGTTGGCAGAGTACCTTGAGCGGAAAGTTGCAGCCAATGTGATTCCGGTTGACGGGGTTTTCTCATTCGATCACGTCGATCGAGCTTCTGGCCTTCTCAACAGAGTTTATCAGCCAGCCCCCGAAAATGAAGCTCGATGGGGCATCATTGATCTTGAGAAGCCCTTAAGCATGTCCAAAGTTGTTCCTGTCATTCTGTTTTTTCATGGTGGGAGCTTCGCTCATTCATCAGCCAACAGTGCTATCTACGACACCTTTTGTCGTCGCATTGTAAGCATTTGCAAGGCAGTGGTTGTTTCTGTTAACTACCGTCGATCGCCCGAACATCGGTATCCATGTGCATATGAAGATGGATGGGCTGCTCTTAAATGGGTTAAGTCCAAAACATGGCTGCAAAGTGGGAAGGATTCTAAGGTTCATGTGTATTTGGCTGGGGACAGTTCTGGTGGCAACATTGCTCATCATGTTGCAGTGCAGGCAGCTGAGGAAGGCATCGAGGTATTAGGGAATATCCTTCTTCACCCGATGTTTGGGGGCGAAAAGAGAACCGAATCGGAGAAGAATCTCGACGGTAAATACTTTGTATCCATTCAAGACAGAGATTGGTACTGGAGAGCCTATCTCCCTGAAGGAGAAGACAGAGATCATCCAGCTTGCAACATTTTCGGCCCCAAGGCCAAAAGCATAGTAGGACTCGACTTCCCGAAAAGCCTAGTCGTTGTCGCCGGTTTGGATCTGATGCAAGATTGGCAACTCGCTTATGTTCAAGGCCTAAAAGACTCCAGTCACGACGTTAAACTTCTCTTCCTCGAGCAGGCGACAATCGGGTTCTACTTCTTGCCAAACAATGAACATTTCTACTGTCTAATGGAAGAGATAAACAAGTTCATCAACCCATAA 1029 46.94 MAGSNEVNLSESKRVVPLNTWVLISNFKLAYTILRRADGTFNRELAEYLERKVAANVIPVDGVFSFDHVDRASGLLNRVYQPAPENEARWGIIDLEKPLSMSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSICKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVQAAEEGIEVLGNILLHPMFGGEKRTESEKNLDGKYFVSIQDRDWYWRAYLPEGEDRDHPACNIFGPKAKSIVGLDFPKSLVVVAGLDLMQDWQLAYVQGLKDSSHDVKLLFLEQATIGFYFLPNNEHFYCLMEEINKFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36006367 36009328 - Sed0003100.1 Sed09g1177 725941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1177 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Sed09g1177 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Sed09g1177 342 FunFam Gibberellin receptor GID1 1 342 - -
Sed09g1177 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787(InterPro)
Sed09g1177 342 PANTHER ARYLACETAMIDE DEACETYLASE 37 326 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Sed09g1177 342 SUPERFAMILY alpha/beta-Hydrolases 97 341 IPR029058 -
Sed09g1177 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g1177 Sed-Chr9:36006367 Sed11g1771 Sed-Chr11:32691845 1.20E-54 dispersed
Sed07g0379 Sed-Chr7:2849822 Sed09g1177 Sed-Chr9:36006367 3.30E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1177 K14493 - csv:101219912 674.855