Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g1198 | ATGGATTCAAGTTCATTCCAATTTCTGTCCAAATTGGGACTGAAACCCGATCCGGAAGAGGCGAGCTTCGCTTTTTTCGCGGTGGTTCTCGTTGTCTGTTATATAATTGTTCGCATTTTTGAGAAGAAACGTTGGCTGAATGAGTCAGTTACTTCCCTAGCCATTGGAATTTGCACTGGAATTTCCATTCTTCTAATCACTGGAGGAAAAAGTTCTCACCTCTTAGAATTCAATGAACAGTTTTTCTTCATTTACATTCTTCCACCCATAATATTTAATGCCGGGTATCAGGTGAAGAAGAAGAAACTGTTTTTCAGAAACTTTCCGTCAATCATATTGTTTGGTGCTTTTGGATCTGTGATATCGTTCTTAATCATATCACTAGGTTCCCTCAACTTATTCAAGAAATTGGGTATTGGCTCATTAAGCACGCAGGATTATTTTGCACTTGGGGCAATCTTAACAGCGACAGATAGTGTTTGCACCTTGCAAGTTCTTAAAGAAGATGAGACACCTTTACTTTATAGTCTGGTCTTTGGCGAAGGCGTGATCAATGATGCTACCTCAGTGGTACTCTTCAATGCAATCAAGAAATTTGACCTCGCTCATATCACTTCTGCAAATACCTTTCAGTTATCCGGAAGTTTCTTGAGTTTGTTTTTCGAAAGCATATTGCTTGGAATTGCAGTTGGGCTGCTATGTTCATTTATCGTGAAGAAGCTATCCTTTGGCAGACACCCTTCAGATTATGAAGCTGTTCTGATGATTTTGTTGGCTTACATTTCGTATTTGATCGCGGAACTATATCTTCTTAGCGGTATTCTTAGTGTGTTCTTTTGTGGGATTGTCATGTCTCACTATACATCTTGGCAATATAATGAATCTGACAGTTCCTCCACACCGGCATCTCGGCAGGCACCTCGCCATGTTTTTGCAACAATATCTTTCGTTGCAGAGATTATTATCTTCCTTTATGTGGGTATGGATGCTTTGGATATTGGGAAGTGGAAAGTTGTTAAAGACAGCCCTGGGACATCATTTGCAGCAAGTTCTATACTTCTATGTCTTGTTCTGGTTGGAAGAGCAGCTTTTGTGTTTCCACTCTCTTTCTTATCCAACTTGACCAGATCGCAAAGAAAAGACCATATTGGGTTTAAACAGCAGTTCACAATTTGGTGGGCTGGGCTCATGAGAGGTGCGGTATCTGTGGCTCTTGCTTATCATCAGTTTGCAAAGCCAGGGGAAAATGAACGAGAGGCTTCGATGATGATAACTAGCACCATTACAATTGTTCTCTTCACAAACGTGGTATGTGGATTGTTCACCAAGAGTATAGTAAAACGCACGGTTGATGGAAATGGCAACAACTCAGATGAAATTGGTCTTTTGCTTCAAGAATTGAATGATCCATTGCTTGTAGTTGATAGTGATGATGCTGAAAACAAGACGGACGAGGAGACAAATTACGACATTAGTTTCATGTCGTTGTTGATGACATCTCCAATTCGATGTTTCCAATACTATTGGATGGAGTTTGATAATTGCATCATGCGCCCGATTTTTGGACGGACTCAATCGTCAACGGAAGTTCTCCCGCCCATAAGTTCTCCCTAG | 1614 | 40.71 | MDSSSFQFLSKLGLKPDPEEASFAFFAVVLVVCYIIVRIFEKKRWLNESVTSLAIGICTGISILLITGGKSSHLLEFNEQFFFIYILPPIIFNAGYQVKKKKLFFRNFPSIILFGAFGSVISFLIISLGSLNLFKKLGIGSLSTQDYFALGAILTATDSVCTLQVLKEDETPLLYSLVFGEGVINDATSVVLFNAIKKFDLAHITSANTFQLSGSFLSLFFESILLGIAVGLLCSFIVKKLSFGRHPSDYEAVLMILLAYISYLIAELYLLSGILSVFFCGIVMSHYTSWQYNESDSSSTPASRQAPRHVFATISFVAEIIIFLYVGMDALDIGKWKVVKDSPGTSFAASSILLCLVLVGRAAFVFPLSFLSNLTRSQRKDHIGFKQQFTIWWAGLMRGAVSVALAYHQFAKPGENEREASMMITSTITIVLFTNVVCGLFTKSIVKRTVDGNGNNSDEIGLLLQELNDPLLVVDSDDAENKTDEETNYDISFMSLLMTSPIRCFQYYWMEFDNCIMRPIFGRTQSSTEVLPPISSP | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 36171641 | 36179333 | - | Sed0027673.1 | Sed09g1198 | 725962 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g1198 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 23 | 526 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
Sed09g1198 | 537 | Pfam | Sodium/hydrogen exchanger family | 29 | 447 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
Sed09g1198 | 537 | Gene3D | - | 142 | 195 | - | - | |
Sed09g1198 | 537 | PRINTS | Na+/H+ exchanger signature | 111 | 119 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed09g1198 | 537 | PRINTS | Na+/H+ exchanger signature | 151 | 161 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed09g1198 | 537 | PRINTS | Na+/H+ exchanger signature | 81 | 92 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed09g1198 | Sed-Chr9:36171641 | Sed11g1168 | Sed-Chr11:27580093 | 8.00E-40 | dispersed | |
Sed09g1198 | Sed-Chr9:36171641 | Sed09g1199 | Sed-Chr9:36182154 | 1.80E-161 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g1198 | - | - | - | 0.0 |