Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1218 ATGGAAGTGAATCGGACGGCTGATAATCATCCGGATCTCCAGGAGAGCTCCGACGAGTCCAGCCCGAACAATATCGCAGAAAGAAAGCTCCGACGAAACGATTCGTTGGACGTCGAATCCCGCACCGTCCACGGCGCCGGCGCCGGCGCCCATGGCTACCAGGTGGGGGCGGCGAGCTGGGGAGCGATATTACATTTGGCGTTTCAGAGCCTCGGAGTTGTGTACGGCGACATCGGAACGTCGCCATTGTACGTGTATGCGAGTACATTCGCGGACGGAATAAAGCATAAGGATGACATTTTGGGGGTGTTGTCTTTGATTCTGTACACCATCACTTTGATCCCTTTGCTTAAGTATGTCTTCTTTGTCTTGCAGGCCAACGACAACGGCGAAGGCGGGACATTTGCATTATACTCCTTACTATGCCGATATGCAAAAATTGGTCTAATACCAAGCGAGCAAGCCGAAGATCAAGAGGTTTCGAATTTTCAGGTGGCGCTGCCGAGCAACCGCCAGAGAATGGCGTCGTGCCTGAAATCGAAGCTCGAAAACAGCCGTGCCGCCAAGATTTTCTTGCTCTTCGCCACCATGCTCGGCACCTCCATGGTCATCGGCGACGGCGTCCTCACTCCTTCCATCTCAGTTTTGTCGGCTGTTGGAGGAATTAAGAATGCTACCTCGACTATGACACAAGACAAAATAGTTTGGATATCAGCAGCAATCTTGGTTTGTCTGTTCATGGTGCAAAGATTTGGTACTCATAAAGTTGGATACTCCTTTGCTCCCATTATTTGCATTTGGTTTGCACTTGTTGGTGGCATTGGCTTCTACAACTTTATAAAATTTGACCCTGCTGTAATCAAAGCTATAAATCCTGTATATATTTTTAAATACTTCAAAAGAAACAAACAGGATGCTTGGATCTCTCTCGGTGGCGTCGTTCTCGCCATTACAGGAACCGAAGCTTTATTTGCGGATGTGGGGCACTTCACAGTGATGTCCATAAGACTAAGCATGTGTTGCGTGGCCTACCCTGCCCTCGTCTCGGCCTACGTCGGTCAAGCCTCCTTTCTCCGAAAGCACCCTGATCTCGTCTCAGATACCTTTTTTCAATCCATTCCAGGTCCTTTCTACTGGCCCACGTTCGTGTCAGCCGTGCTTGCCTCAATCGTTGCGAGCCAAGCGATGATCTCTGGCACGTTCTCCATCATCCAACAATCCCTCTCCTATGGCTGCTTCCCTAGGGTTAAAGTTGTCCATACTTCTTCCAAGTATGAGGGTCAAGTTTACATTCCTGAAGTTAACTACCTTCTCATGTTTGCTTGTCTTGGAGTTACTCTAGGGTTCAAAGATACGACGAGAATCGGGAATGCCTATGGAATTGCTGTTGTGTTTGTAATGGCACTTACTTCAAGTTTCCTTGTGCTAATCATGATCATGATATGGAAATCTCACATACTTGTGATTATCTCATATATTCTCACCATTGGCTTATTGGAGCTTTTCTATCTAAGTTCAGTCCTATACAAGTTTGATCAAGGGGGCTATCTTCCTTTAGCTTTTGCTGGCTTTTTGATGATAATAATGTTCATTTGGAATGATGTCCATAGAAGAAAATACTACTACGAGCTTGAGCACAAGATCTCTCCTCAAAAGCTCAAGGACATTGCATCCCTCACAACCATCAATCGTGTCCCCGGCCTCGCCTTGTTCTACTCTGAGCTCGTCCAAGGCGTTCCTCCAATCTTCAAGCATTATCTAGCCAACATCCCGACTCTCCAAAGGGTCCTCATTTTCGTATCCTTCAAGTCCCTCCCGATAAGCAAAGTCCAGATGGAAGAGCGGTTCTTGTTTCGGCGAGTGGAGCCTAATGACATCAATGTATTTCGTTGTGTGGTTCGATACGGATACAGAGACATCATCCACGAGCAAGAGTCATTCGAGAGAGTACTGGTGGAGAGATTGAAAAGGTTTATCGAAGAGGAGTCGTGGATGTTGCAAAACGATGACGGTAGAGCCGATGAGACGAGGAGGAGAGTAGGAGAGGAGATGGAGGTGGTGGATAAAGCTTGGAGAGATGGGATTGTCCATTTGATTGGACAAAATGAGGTTGTGGCAAGCAAAGGGTCAGGGTTTGCAAAAAGGGTTTTGATCAATTATGCTTATAATGCATTGAGAAGAAACTTGAGACAAAGTGAAGAGGTCTTTTACATTCCTCGCAAGCGTATGCTCAAAGTTGGAATGACTTATGAACTTTAG 2259 46.66 MEVNRTADNHPDLQESSDESSPNNIAERKLRRNDSLDVESRTVHGAGAGAHGYQVGAASWGAILHLAFQSLGVVYGDIGTSPLYVYASTFADGIKHKDDILGVLSLILYTITLIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSEQAEDQEVSNFQVALPSNRQRMASCLKSKLENSRAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFALVGGIGFYNFIKFDPAVIKAINPVYIFKYFKRNKQDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVAYPALVSAYVGQASFLRKHPDLVSDTFFQSIPGPFYWPTFVSAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMFACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHILVIISYILTIGLLELFYLSSVLYKFDQGGYLPLAFAGFLMIIMFIWNDVHRRKYYYELEHKISPQKLKDIASLTTINRVPGLALFYSELVQGVPPIFKHYLANIPTLQRVLIFVSFKSLPISKVQMEERFLFRRVEPNDINVFRCVVRYGYRDIIHEQESFERVLVERLKRFIEEESWMLQNDDGRADETRRRVGEEMEVVDKAWRDGIVHLIGQNEVVASKGSGFAKRVLINYAYNALRRNLRQSEEVFYIPRKRMLKVGMTYEL 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36426336 36436023 - Sed0025231.1 Sed09g1218 725982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1218 752 MobiDBLite consensus disorder prediction 1 26 - -
Sed09g1218 752 NCBIfam potassium uptake protein 66 751 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed09g1218 752 MobiDBLite consensus disorder prediction 1 15 - -
Sed09g1218 752 Pfam K+ potassium transporter integral membrane domain 66 552 IPR053951 -
Sed09g1218 752 Pfam K+ potassium transporter C-terminal domain 566 752 IPR053952 -
Sed09g1218 752 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 34 751 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0337 Sed-Chr7:2556386 Sed09g1218 Sed-Chr9:36426336 1.10E-281 dispersed
Sed09g1218 Sed-Chr9:36426336 Sed12g1143 Sed-Chr12:7537722 2.30E-295 dispersed
Sed09g1218 Sed-Chr9:36426336 Sed09g1219 Sed-Chr9:36449748 4.70E-22 tandem
Sed02g0933 Sed-Chr2:46891338 Sed09g1218 Sed-Chr9:36426336 3.10E-221 transposed
Sed07g0336 Sed-Chr7:2547080 Sed09g1218 Sed-Chr9:36426336 3.40E-275 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1218 K03549 - csv:101213493 1338.94