Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1220 ATGACCTTGAATTTAATTCATCTTTCTCAGTTACTTGTGGTCTGCTTTGGTGGGTTTGAAAGTCAATATTTTGGAAATAGAATAAAGAACAAAAGATATAGGATAAATTCATTTCATCTCTACAATCGCAAACTCAACGGCGGGGCGGCGGCGGCGGCGGGGTGGTGGGTGACTCTGCAGCTGGCGTTTCAGAGCATCGGAATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCCGAGCACTTTTCCGGCGGGGATAAAATACAACGACGACGTTTTGGGAGTTCTATTGGTGATTTATTATACGCTCACTTTGCTCCCTTTGATCAAATATGTCTTCATCGTTTTGCAAGCTAATGACAATGGCGATGGAGGAACATTTGCATTGTATTCTTTACTTTGCCGGTATGCAAGAATAGGGCTAATACCTAGCCAACAAGCCGAGGATCGAGAGGTTTCTACATACAAATTGGACACCCCAAACAACCGTGTGCGGAGGGCGTCGTGGCTGAAGTCGATGCTCGAGAGTAGTCGTGGTGCTAAGCTTTTCTTGCTCTTCGTCACCATGCTCGGTACCTCCATGGTCATCGGCGACGGGGTTCTTACTCCTTGCATTTCTGCTTTGTCGGCTGTTGGAGGCATTAAGAGAGCTAAATCTTCGATAACACAAGATTTGGAACAGAAAGTTGGCTACACTTTTGCCCCAATTATATGCATTTGGTTCAGTTTCATAGCTGCCATTGGTTTCTACAATTTTGTCAAATTTGACCCCACAATTATCAAAGCTGTTAACCCTAAATATATCATTGACTATTTCAAAAGGAACCACACCCAAGCTTGGATTTCCCTTGGGGGCATTGTTCTCTCCACAACAGGGACAGAAGCATTAATTGCAGATGTTGGGCATTTTTCAGTAAGATCAATACAAATTAGCATGTGTGCAATTACCTATCCTGCCCTTTTACTTGCTTACACAGGACAAGCTTCTTACCTTCACACTCACCCTGAGGTTGTTGAAGATTCCTTCTTCAAATCCATTCCAGATCCATTATACTGGCCAATATTTATATTGGCTGTATTGTCAGCCATAATTGCAAGCCAAGCTATGATTTCAGGAACATTTTCTGTAATTCAGCAATCACTTTCACTTGGGTGTTTTCCAAGGGTCAAAATTGTTCATACCTCAGATAAGCATCATGGCCAAGTTTACATCCCTGAAGTTAACTATCTACTCATGCTTGCTTGTTTGGCTGTCACTGTTTGCTTTAAGGACACTGTCAGTATAGGAAATGCTTATGGTATAGCTGTTGTGTTTGTAATGACTCTCACATCCTCATTCTTGATACTAATCATGATCATGATATGGAAAACCCACATGATTTGGATCATCATTTACATTCTTGTGATTGGTTCAGTGGAGCTTCTATATTTGAGTTCAGTCCTTTACAAGTTTAATCAAGGTGGATATCTTCCACTTGCTTTTGCCTTAGTACTTATGGCCATAATGTACACTTGGAACACTGTCTATAGAAAAAAGTACCATTATGAGCTAGAAAACAAGATCTCTCCTAATCAGCTAGAAGAAATGATCTTAAATGCCAACCCTTGTAGACTTCCTGGCCTTGCTATTTTCTACTCTGAGCTTGTGCAAGGCATTCCTCCCATTTTCAAGCTTTATATGGCCAATGTCCCCGCCCTCCACCACGTCCTCGTCTTCGTCTCGATCAAGTCGTTGCCCATAAGTAAGGTCCCATCTGAAGAGCGATTTCTCTTTCGCAGAGTCGAGCCAAGAGAGCTAAACATCTTTCGGTGCGTCGTGCGATATGGTTACACAGATAGACGGAGTCACGAGGTGGAGTCATTTGAGACAAGTTTGGTGGAGAGGTTGAAAGGGTTTTTGAGTGATGATATTTGGGATTCTGTGGTGGATGAGGAAGATGAGAATGTGGAAGAGATCAAACACAAAATTAAAGAAGAGGAATTGGAAAGAGACAATGGAGAACTGGATAAGGCATGGCAAAAGGGTGTCATTCACTTGGTTGGAGAAAGTGAAATTGTTGCCAAAGAAGGATCCAATATTTGGAAGAGGGCTTTGATTGATTATGTTTACACTTTCTTGAAGAACAATTTGAGACAAAGTGAGAAAATTTTTGGTATTCCTCATAAAAGTTTGCTTAAGGTGGGAATGACATATGAGCTTTAA 2211 41.75 MTLNLIHLSQLLVVCFGGFESQYFGNRIKNKRYRINSFHLYNRKLNGGAAAAAGWWVTLQLAFQSIGIVYGDIGTSPLYVFPSTFPAGIKYNDDVLGVLLVIYYTLTLLPLIKYVFIVLQANDNGDGGTFALYSLLCRYARIGLIPSQQAEDREVSTYKLDTPNNRVRRASWLKSMLESSRGAKLFLLFVTMLGTSMVIGDGVLTPCISALSAVGGIKRAKSSITQDLEQKVGYTFAPIICIWFSFIAAIGFYNFVKFDPTIIKAVNPKYIIDYFKRNHTQAWISLGGIVLSTTGTEALIADVGHFSVRSIQISMCAITYPALLLAYTGQASYLHTHPEVVEDSFFKSIPDPLYWPIFILAVLSAIIASQAMISGTFSVIQQSLSLGCFPRVKIVHTSDKHHGQVYIPEVNYLLMLACLAVTVCFKDTVSIGNAYGIAVVFVMTLTSSFLILIMIMIWKTHMIWIIIYILVIGSVELLYLSSVLYKFNQGGYLPLAFALVLMAIMYTWNTVYRKKYHYELENKISPNQLEEMILNANPCRLPGLAIFYSELVQGIPPIFKLYMANVPALHHVLVFVSIKSLPISKVPSEERFLFRRVEPRELNIFRCVVRYGYTDRRSHEVESFETSLVERLKGFLSDDIWDSVVDEEDENVEEIKHKIKEEELERDNGELDKAWQKGVIHLVGESEIVAKEGSNIWKRALIDYVYTFLKNNLRQSEKIFGIPHKSLLKVGMTYEL 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36452953 36471935 - Sed0008921.1 Sed09g1220 725984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1220 736 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 50 735 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed09g1220 736 Pfam K+ potassium transporter integral membrane domain 61 528 IPR053951 -
Sed09g1220 736 Coils Coil 645 672 - -
Sed09g1220 736 NCBIfam potassium uptake protein 61 735 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed09g1220 736 Pfam K+ potassium transporter C-terminal domain 542 736 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g1220 Sed-Chr9:36452953 Sed12g1143 Sed-Chr12:7537722 3.10E-260 dispersed
Sed09g1219 Sed-Chr9:36449748 Sed09g1220 Sed-Chr9:36452953 6.30E-52 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1220 K03549 - csv:101204520 1075.08