Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1223 ATGGCCAGCCCCATCAAAGTCCATGGAGTCCCCTTTTCCACACCCACATGCAGGGTTCTAGCTTGCCTCTACGAGAAAGAACTCGACTTCGAGTTCGTCCAAGTCGATGTTCGCGAAGGGGAACACAAAAACCAGCCCTTCCTCTCCATCAATCCATTTGGCCAAGTTCCTGGATTCCAAGATGGAAATTTGACACTTTTTGAATCGAGGGCAATCACACATTACATAACAAGAAATTATGCTAATGATGGAACCCAATTGATTTCTCAAGATCCCAAAAGAGCAGCGATTGAGTTAACATGGATTGAAGTAGAGAGCCACCATTTCGATCCACCGGCCACGAAAGTGGTGTTCGAGCTCTGCATAAAACCATTGCTCGGGTGGGGCGAGATAGATGCTGATTTGGTTGAGAAAAGTGAAGGGGAGTTGGCCAAAGTTCTTGATATCTATGAGAAGAGGCTGGCTGAATCCAAATACTTGGGTGGTGAGTCCTTTAGTTTGGCTGATTTGCACCATTTACCAGCCTTGGGGTTCTTGTTGGAGATACAAAGCAAGAAATTGATTGAGTCTAGGCCCCATGTCTATGCTTGGGCAAATGACATCTTGGCTAGGCCAGCTTGGGCTAAGGTCCTTGCTTTGCGCTAA 645 46.67 MASPIKVHGVPFSTPTCRVLACLYEKELDFEFVQVDVREGEHKNQPFLSINPFGQVPGFQDGNLTLFESRAITHYITRNYANDGTQLISQDPKRAAIELTWIEVESHHFDPPATKVVFELCIKPLLGWGEIDADLVEKSEGELAKVLDIYEKRLAESKYLGGESFSLADLHHLPALGFLLEIQSKKLIESRPHVYAWANDILARPAWAKVLALR 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36499502 36501400 - Sed0024229.1 Sed09g1223 725987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1223 214 Pfam Glutathione S-transferase, C-terminal domain 112 205 IPR004046 -
Sed09g1223 214 FunFam Glutathione S-transferase F2 4 88 - -
Sed09g1223 214 SUPERFAMILY Thioredoxin-like 4 84 IPR036249 -
Sed09g1223 214 SFLD Glutathione Transferase (cytosolic) 4 212 IPR040079 -
Sed09g1223 214 SFLD Main.5: Phi-like 4 212 - -
Sed09g1223 214 SUPERFAMILY GST C-terminal domain-like 75 212 IPR036282 -
Sed09g1223 214 Gene3D - 91 214 - -
Sed09g1223 214 Pfam Glutathione S-transferase, N-terminal domain 4 78 IPR004045 -
Sed09g1223 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 213 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Sed09g1223 214 Gene3D Glutaredoxin 3 88 - -
Sed09g1223 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
Sed09g1223 214 FunFam Glutathione S-transferase F2 89 211 - -
Sed09g1223 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Sed09g1223 214 CDD GST_C_Phi 93 211 IPR034347 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g1223 Sed-Chr9:36499502 Sed09g1225 Sed-Chr9:36509867 2.00E-87 dispersed
Sed09g1223 Sed-Chr9:36499502 Sed09g1224 Sed-Chr9:36504335 5.50E-109 tandem
Sed07g0332 Sed-Chr7:2509087 Sed09g1223 Sed-Chr9:36499502 2.20E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1223 K00799 - csv:101212536 331.643