Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g1224 | ATGGGTGGCCTCATCAAAGTCCATGGAGTCCCCCTTTCCACAGCCACATGCAGGATTGTGGCTTGTCTCTACGAGAATGAGCTCGATTTCGAGTTCGTCCAACTCAAAATGCACCAAGGAGAACACAAGAGCCAACCCTTTCTCTCCATCAATCCATTTGGTCAAGTTCCAGGATTCCAAGATGGAGATTTGACACTTTTTGAATCCAGGGCAATCACGCAATACATAGCAAGAAATTACGCTAATAATGGAGTCCAATTGATATCCCAAGACCCCAAGAAAGCAGCAATTGAATTAACGTGGATTGAAGTGGAGAGCCACCATTTCGACCCACCGGCATCGAAGCTGCTGTTCGAGCTCTGCTTGAAGCCTTTGCTCGGGTGGGGCGAGGCCGATGGTTCCGTGGTTGAGAAAAGTGAAGGGGAGTTGGCCAAAGTTCTTGATATCTATGAGAAGAGGCTGGCTGAATCCAAATACTTGGGTGGTGAGTCCTTTAGTTTGGCTGATTTGCACCATTTACCAGCCTTGGGGTTCTTGTTGGAGATACAAAGCAAGAAATTGATCGAGTCTAGGCCCCATGTCTATGCTTGGGCAAATGATATCTTGGCTAGGCCAGCTTGGGCTAAGGTCCTTGCTTTGCGCTAA | 645 | 47.91 | MGGLIKVHGVPLSTATCRIVACLYENELDFEFVQLKMHQGEHKSQPFLSINPFGQVPGFQDGDLTLFESRAITQYIARNYANNGVQLISQDPKKAAIELTWIEVESHHFDPPASKLLFELCLKPLLGWGEADGSVVEKSEGELAKVLDIYEKRLAESKYLGGESFSLADLHHLPALGFLLEIQSKKLIESRPHVYAWANDILARPAWAKVLALR | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 36504335 | 36506807 | - | Sed0024825.1 | Sed09g1224 | 725988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g1224 | 214 | Pfam | Glutathione S-transferase, C-terminal domain | 123 | 205 | IPR004046 | - | |
Sed09g1224 | 214 | FunFam | Glutathione S-transferase F2 | 89 | 211 | - | - | |
Sed09g1224 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 6 | 213 | - | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER) | |
Sed09g1224 | 214 | CDD | GST_N_Phi | 5 | 79 | - | - | |
Sed09g1224 | 214 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 84 | IPR004045 | - | |
Sed09g1224 | 214 | Gene3D | Glutaredoxin | 4 | 88 | - | - | |
Sed09g1224 | 214 | Gene3D | - | 91 | 214 | - | - | |
Sed09g1224 | 214 | SFLD | Main (cytGST) | 5 | 212 | - | - | |
Sed09g1224 | 214 | FunFam | Glutathione S-transferase F2 | 4 | 88 | - | - | |
Sed09g1224 | 214 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 214 | IPR010987 | - | |
Sed09g1224 | 214 | Pfam | Glutathione S-transferase, N-terminal domain | 7 | 78 | IPR004045 | - | |
Sed09g1224 | 214 | SUPERFAMILY | Thioredoxin-like | 5 | 84 | IPR036249 | - | |
Sed09g1224 | 214 | SUPERFAMILY | GST C-terminal domain-like | 75 | 212 | IPR036282 | - | |
Sed09g1224 | 214 | CDD | GST_C_Phi | 93 | 211 | IPR034347 | - | |
Sed09g1224 | 214 | SFLD | Main.5: Phi-like | 5 | 212 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed09g1224 | Sed-Chr9:36504335 | Sed11g1114 | Sed-Chr11:26854797 | 3.60E-44 | dispersed | |
Sed09g1223 | Sed-Chr9:36499502 | Sed09g1224 | Sed-Chr9:36504335 | 5.50E-109 | tandem | |
Sed09g1224 | Sed-Chr9:36504335 | Sed09g1225 | Sed-Chr9:36509867 | 6.80E-91 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g1224 | K00799 | - | csv:101212291 | 335.495 |