Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1225 ATGTTAAAAGAAAAAAAAAACGAAAAGTGTCGATATCTGCCGATTTGCGAGCAGAATTTCCTCCATGTAATCCACGGAATCGCAGCATCCACAGCCACATGCAGAGTCCTTGCTGCCCTCTACGAGAAGGGCCTTCAATTCGATCTCGTCAATGTCAAATTACACGAAGGAGAACACAAACAAGAGCCCTTCCTCTCGATCAATCCATTCGGCCAAGTCCCCGGGTTCCACGATGGAGATCTGTCACTTTTCGAATCGAGGGCAATTACGCAGTACATCTCGAGAAATTACGCCAGCAATGGAAACGAGCTGATTCCCCAAGACCCCAAGAAGGCAGCGAGCGTAATCACATGGATTGAAGTCGAGAGCCACCATTTCGATCCATTGGCCATGAAACTGGTGTTTGAGCTGTGTTTAAAGCCAGCATTTGGGTGGGGGGAGACAGATGAGGCAGTGGTTGAGAAAAGTGAAGCTGATTTAGCCAAAGTGCTTGACATCTATGAGAAGAGGCTGTCACAGTCTAAATACTTGGGAGGAGGGTCTTTCAGTTTGGCTGATCTGCATCATCTCCCTGTTTTGGGTTACTTGTTGGCTTCAAAATCCAAGCATCTGTTTGAGTCTAGACCCCATGTCAATGCTTGGGTGGCTGATATCATGGCTAGGCCTTCTTGGGCCAAGGTGCTTGCTCTTCGCAACTAA 699 47.64 MLKEKKNEKCRYLPICEQNFLHVIHGIAASTATCRVLAALYEKGLQFDLVNVKLHEGEHKQEPFLSINPFGQVPGFHDGDLSLFESRAITQYISRNYASNGNELIPQDPKKAASVITWIEVESHHFDPLAMKLVFELCLKPAFGWGETDEAVVEKSEADLAKVLDIYEKRLSQSKYLGGGSFSLADLHHLPVLGYLLASKSKHLFESRPHVNAWVADIMARPSWAKVLALRN 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36509867 36511742 - Sed0007616.1 Sed09g1225 725989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1225 232 SUPERFAMILY Thioredoxin-like 22 106 IPR036249 -
Sed09g1225 232 PANTHER GLUTATHIONE S-TRANSFERASE RHO 24 230 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Sed09g1225 232 FunFam Glutathione S-transferase F2 22 105 - -
Sed09g1225 232 SFLD Glutathione Transferase (cytosolic) 24 229 IPR040079 -
Sed09g1225 232 Gene3D - 108 232 - -
Sed09g1225 232 Gene3D Glutaredoxin 23 105 - -
Sed09g1225 232 SFLD Main.5: Phi-like 24 229 - -
Sed09g1225 232 FunFam Glutathione S-transferase F2 106 228 - -
Sed09g1225 232 Pfam Glutathione S-transferase, N-terminal domain 30 95 IPR004045 -
Sed09g1225 232 CDD GST_C_Phi 110 228 IPR034347 -
Sed09g1225 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 108 232 IPR010987 -
Sed09g1225 232 Pfam Glutathione S-transferase, C-terminal domain 127 222 IPR004046 -
Sed09g1225 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 20 101 IPR004045 -
Sed09g1225 232 SUPERFAMILY GST C-terminal domain-like 92 230 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0332 Sed-Chr7:2509087 Sed09g1225 Sed-Chr9:36509867 5.00E-94 dispersed
Sed07g0333 Sed-Chr7:2511863 Sed09g1225 Sed-Chr9:36509867 6.00E-79 dispersed
Sed09g1223 Sed-Chr9:36499502 Sed09g1225 Sed-Chr9:36509867 2.00E-87 dispersed
Sed09g1225 Sed-Chr9:36509867 Sed11g1114 Sed-Chr11:26854797 2.20E-42 dispersed
Sed09g1224 Sed-Chr9:36504335 Sed09g1225 Sed-Chr9:36509867 6.80E-91 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1225 K00799 - csv:101212291 358.607