Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g1225 | ATGTTAAAAGAAAAAAAAAACGAAAAGTGTCGATATCTGCCGATTTGCGAGCAGAATTTCCTCCATGTAATCCACGGAATCGCAGCATCCACAGCCACATGCAGAGTCCTTGCTGCCCTCTACGAGAAGGGCCTTCAATTCGATCTCGTCAATGTCAAATTACACGAAGGAGAACACAAACAAGAGCCCTTCCTCTCGATCAATCCATTCGGCCAAGTCCCCGGGTTCCACGATGGAGATCTGTCACTTTTCGAATCGAGGGCAATTACGCAGTACATCTCGAGAAATTACGCCAGCAATGGAAACGAGCTGATTCCCCAAGACCCCAAGAAGGCAGCGAGCGTAATCACATGGATTGAAGTCGAGAGCCACCATTTCGATCCATTGGCCATGAAACTGGTGTTTGAGCTGTGTTTAAAGCCAGCATTTGGGTGGGGGGAGACAGATGAGGCAGTGGTTGAGAAAAGTGAAGCTGATTTAGCCAAAGTGCTTGACATCTATGAGAAGAGGCTGTCACAGTCTAAATACTTGGGAGGAGGGTCTTTCAGTTTGGCTGATCTGCATCATCTCCCTGTTTTGGGTTACTTGTTGGCTTCAAAATCCAAGCATCTGTTTGAGTCTAGACCCCATGTCAATGCTTGGGTGGCTGATATCATGGCTAGGCCTTCTTGGGCCAAGGTGCTTGCTCTTCGCAACTAA | 699 | 47.64 | MLKEKKNEKCRYLPICEQNFLHVIHGIAASTATCRVLAALYEKGLQFDLVNVKLHEGEHKQEPFLSINPFGQVPGFHDGDLSLFESRAITQYISRNYASNGNELIPQDPKKAASVITWIEVESHHFDPLAMKLVFELCLKPAFGWGETDEAVVEKSEADLAKVLDIYEKRLSQSKYLGGGSFSLADLHHLPVLGYLLASKSKHLFESRPHVNAWVADIMARPSWAKVLALRN | 232 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 36509867 | 36511742 | - | Sed0007616.1 | Sed09g1225 | 725989 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g1225 | 232 | SUPERFAMILY | Thioredoxin-like | 22 | 106 | IPR036249 | - | |
Sed09g1225 | 232 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 24 | 230 | - | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER) | |
Sed09g1225 | 232 | FunFam | Glutathione S-transferase F2 | 22 | 105 | - | - | |
Sed09g1225 | 232 | SFLD | Glutathione Transferase (cytosolic) | 24 | 229 | IPR040079 | - | |
Sed09g1225 | 232 | Gene3D | - | 108 | 232 | - | - | |
Sed09g1225 | 232 | Gene3D | Glutaredoxin | 23 | 105 | - | - | |
Sed09g1225 | 232 | SFLD | Main.5: Phi-like | 24 | 229 | - | - | |
Sed09g1225 | 232 | FunFam | Glutathione S-transferase F2 | 106 | 228 | - | - | |
Sed09g1225 | 232 | Pfam | Glutathione S-transferase, N-terminal domain | 30 | 95 | IPR004045 | - | |
Sed09g1225 | 232 | CDD | GST_C_Phi | 110 | 228 | IPR034347 | - | |
Sed09g1225 | 232 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 108 | 232 | IPR010987 | - | |
Sed09g1225 | 232 | Pfam | Glutathione S-transferase, C-terminal domain | 127 | 222 | IPR004046 | - | |
Sed09g1225 | 232 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 20 | 101 | IPR004045 | - | |
Sed09g1225 | 232 | SUPERFAMILY | GST C-terminal domain-like | 92 | 230 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g0332 | Sed-Chr7:2509087 | Sed09g1225 | Sed-Chr9:36509867 | 5.00E-94 | dispersed | |
Sed07g0333 | Sed-Chr7:2511863 | Sed09g1225 | Sed-Chr9:36509867 | 6.00E-79 | dispersed | |
Sed09g1223 | Sed-Chr9:36499502 | Sed09g1225 | Sed-Chr9:36509867 | 2.00E-87 | dispersed | |
Sed09g1225 | Sed-Chr9:36509867 | Sed11g1114 | Sed-Chr11:26854797 | 2.20E-42 | dispersed | |
Sed09g1224 | Sed-Chr9:36504335 | Sed09g1225 | Sed-Chr9:36509867 | 6.80E-91 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g1225 | K00799 | - | csv:101212291 | 358.607 |