Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1328 ATGAAGAGTGATTTAGGTGGAAAATTAAAGCTTATAGGGCTTTTAATGGTGGGGATATTAATAATGGGAGCTAAAATTGTTGATAGTGAAGATTTGGAATTAGGGTTTTATAGTGAAACATGTCCTTTGGCAGAACATATTGTGAGAACCACAGTGGCAAAGGCTGTTGCTATCAACCCTGGAATGGCTGCTGGCCTTATTCGTTTGCATTTTCATGATTGTATTGTTCTAGGTTGTGACGCATCAATACTCCTGGACAAAACGACTGAAAATCCAGATTCTGAGAAAGACAATTTCGCGAACCCGTTACTACGCGGGTTCGAAATAATCGACGACGCCAAATCCAAACTCGAGTTCCATTGTCCCCAAACAGTGTCCTGCGCCGACATTTTGGCCTTCGCCGCTCGGGACAGCATTGCGGCCGCCGGGCAGTTCACGTACGCCGTACCCGGGGGCCGCCGAGACTCTCTCGTCTCTCATGGAGCTAATGTTTCCACCAACGTCCCTTTCCCGACAGACATCATCATCCTCAAACGACACTTTGAACAACGGGGCTTGTCCTTGACTGACATGGTGGCTCTCTCAGGTGCCCACTCGATTGGATTAGCCCCTTGCAATGCCTTTTCCGATCGGCTTTATTTCTTTAACGATGTAATTAATGCAACCGATCCATCTTTGGACCCAAAGTTTTTGGCTTTTTTGAAACTCAAATGTCCATTGAATACACAAATGAATAAAGTAACAGTGGATTTAGACAATGTGACTCCAAATCGGCTGGATGTTCAATTTTATGACAATTTGAAGAGAAGGATGGGGGTTTTGTCGTCGGATCAGGCGCTCGAGACCGACCCTTTGACGGCGGCGACGGTGAGGCGGTACCGGAGGAATAGGGCCGCGTGGATGAGCGATTTCTCGAAGGCAATGGTCAAGATGGGGAAGCTTAAGGTTTTGACTGGAACTCAAGGGGAGATTAGAAGGAATTGTCATTTTAGGAACTAG 999 46.55 MKSDLGGKLKLIGLLMVGILIMGAKIVDSEDLELGFYSETCPLAEHIVRTTVAKAVAINPGMAAGLIRLHFHDCIVLGCDASILLDKTTENPDSEKDNFANPLLRGFEIIDDAKSKLEFHCPQTVSCADILAFAARDSIAAAGQFTYAVPGGRRDSLVSHGANVSTNVPFPTDIIILKRHFEQRGLSLTDMVALSGAHSIGLAPCNAFSDRLYFFNDVINATDPSLDPKFLAFLKLKCPLNTQMNKVTVDLDNVTPNRLDVQFYDNLKRRMGVLSSDQALETDPLTAATVRRYRRNRAAWMSDFSKAMVKMGKLKVLTGTQGEIRRNCHFRN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37419271 37422134 + Sed0018503.1 Sed09g1328 726092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1328 332 Pfam Peroxidase 48 296 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PANTHER PEROXIDASE 25-RELATED 25 328 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Sed09g1328 332 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Sed09g1328 332 SUPERFAMILY Heme-dependent peroxidases 32 332 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 FunFam Peroxidase 170 311 - -
Sed09g1328 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Sed09g1328 332 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 ProSiteProfiles Plant heme peroxidase family profile. 31 332 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed09g1328 332 CDD secretory_peroxidase 32 330 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed09g1328 332 Gene3D - 35 332 - -
Sed09g1328 332 FunFam Peroxidase 35 178 - -
Sed09g1328 332 Gene3D Peroxidase, domain 2 169 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0621 Sed-Chr7:4701561 Sed09g1328 Sed-Chr9:37419271 2.00E-134 dispersed
Sed09g1328 Sed-Chr9:37419271 Sed10g1834 Sed-Chr10:35367093 3.40E-65 dispersed
Sed09g1328 Sed-Chr9:37419271 Sed09g1329 Sed-Chr9:37422884 3.30E-68 tandem
Sed07g0619 Sed-Chr7:4692166 Sed09g1328 Sed-Chr9:37419271 3.80E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1328 K00430 - csv:101216219 449.899