Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1333 ATGGACGATAGCTGCGCGGTCTGTGCCGAAACTCTCGAATGGGTTGCTTACGGCGCTTGTGGGCATCGCGATGTGTGCTCCACCTGCGTTGCTCGCCTCCGATTCATCTGCAGTGATCGCCGGTGTTGCATCTGCAAGTCCGAATCCGCCGCCGTGTTCGTCACTAAGGCCTTGGGAGATTATACAAGGACGATCAACGACTTTGCAGTCTTTCCTTCTGAACCAAGAGAAGGTCGTAGTGGACCCTATTGGTATCATGAAGACACACAAACATTTTTTGATGATGTTGACCATTACAAGATGATAAAAGCAATGTGTAAGTTATCATGCGGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGGCTCAAAGCGCAGAGGAAGATTTCGGAATGTTGACCAGCTTAAGGGTCATTTGTTTCATCTGCACAAGTTGTTTATGTGTAGCCTTTGTTTGGAAGGGAGAAAGATTTTTATTTGCGAACAAAAGCTATACAATAGAGCACAATTGAATCAGCATATACGCACTGGTGACTCTAAGGTGGACGGAAGTGAGAGCGAGAGAGGTGGTTTCACTGGGCACCCTATGTGTGAATTTTGCAGAACTCCGTTTTATGGAGATAATGAGTTGTATACTCATATGTCAACTGAGCATTATACATGTCATATATGCCAAAGGGTCCATCCTGGACAGTATGAATACTATAAGAATTATGATGACCTAGAGATCCATTTCCGACAAGCACATTTTCTTTGTGAGGAAGAAGCCTGCCTTGCTAAAAAGTTTTTAGTGTTCCAAACTGAAGCAGAAATTAAGAGGCATAATACTATTGAACATGGTGGCAAGCTATCTCGATCGAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCTGTATCGAAGAAGTAACAACGAGCAAGAGAATCGCCGTGGTAGACGAACATTTCGTCGTGACTCTTCCGTCGATCTACTTCCTTTAGCCATTCAAGAAAGTTTTGAAACAGCCAATGTTGAGGACACTAATCATGGCCCATTGCCTAGCGGACAAGTAATCTTGGAGCAGGGAAATGCAAGAAACATCGATCCCTTAATCGAACCATTTGAGTCATTAGCAACAACAGATCCTAAATACCTTCAAGCCTTAGGCCACTCTAGGAATTCCCAATTTGAGCAATCATCCTTTCCACCCCTTTCAACAGGATCTAGCAGCAGCCAACCGAAGTCCACGCACGACAAAGATGCTATACCGAATAAAAGTATGGCAGCTCATCTTCGCCGCCAGAGGAATAATGTAACTGTTTTGAATTCTGCTCAAGGTTGGCCGAAATCAAGCCGTGCCCCTGTGCTACCATCAAATCATTCATCTCAAGCTTGGCCCGCAATAAATGCTAATAATCATCCAGCATCAAGCAGTTCTGGGCGGACTAAGGGTGTTGTTGTCAACAACAGTATTGGCTCTTCACCTTCAATCTCTGGTTACTCAAATGCTGCAATGCATGCGAAAGGTCGAGCTAGTTCGTCAAGTGGATCAGGTAGTAGCAGTAGGATCAGCCACTCTGCTTCCGCTCCCAGTCTGACCGACGTGGCGTACACGGAACCCTCATTTAATGATTTCCCTCCAGTTTCTGCAGTGGCACAGGCACATAGAGTGCCCTCAAATAGCCAGAGTGCAAGAAACATGGAAGATGTCCAAACAGCAAACAAATCTTTAGTTGAAAAGATACGTGCTGCTCTTAATTTTGACCACGATACATATGCCATTTTTAAAGATATAACTGCACAATATCGTCTGGGTCAGATGGACACGGAAATGTATCTTGACTGTGTGCAGCAGTTTGGTTTGTCGCATCTCGTGCTTGATCTGGCTAGGCTTTGTCCTGATACTCGAAAACAGAATGAACTTGTGGAGACCTATAAAGCTAGTTTAAATAAAGATGTGATCCAAGAAAATGGTAGGGCTCGAGATAGCATTCAAATTAAAGACAAAAGTAAGGGAAAGAAAGGCAAAGGGAAATCCGTGGATGTTAAAGACAGCAGTTCCAAAGACAAGTTAGCGGATAGTATCTTGGATAGTGTTCGGGAACTGCAGCCGAGTCTTCGCCAAACAGAGGATAATGTAGAGGTATTGTCAAAGGGCGAGTACCGTGCTGCAAAAGGGAAATCGAAGATGTCGTCCGACGACCAGCAAGGTGGGACAGGAGGCCAAAACAGTCAACCGTCTACGGGTCTATCGAATCAGAGCACTGGGGATGGGGGTGGAGGTGGGGGGAACAAGAAGAAAAAGAAAACCTCCAAGTTCCATAGAGTTCGTTTAGGCGATGGTTCAGTCGCTGCACTTTTAGATTTGAAGAACTCAAATCCCGAACCGGACCCGGTAGAGAAAGAAGAGGTTAGGAACAATGCTGGGGCATTGCCTGTTCGTGGCATCTGGCGAAATGGTGCTCAGAAACTTTTCTCGTAG 2469 45.08 MDDSCAVCAETLEWVAYGACGHRDVCSTCVARLRFICSDRRCCICKSESAAVFVTKALGDYTRTINDFAVFPSEPREGRSGPYWYHEDTQTFFDDVDHYKMIKAMCKLSCGVCDKIGEDQPNDGSKRRGRFRNVDQLKGHLFHLHKLFMCSLCLEGRKIFICEQKLYNRAQLNQHIRTGDSKVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRVHPGQYEYYKNYDDLEIHFRQAHFLCEEEACLAKKFLVFQTEAEIKRHNTIEHGGKLSRSKRNAALQIPTSFLYRRSNNEQENRRGRRTFRRDSSVDLLPLAIQESFETANVEDTNHGPLPSGQVILEQGNARNIDPLIEPFESLATTDPKYLQALGHSRNSQFEQSSFPPLSTGSSSSQPKSTHDKDAIPNKSMAAHLRRQRNNVTVLNSAQGWPKSSRAPVLPSNHSSQAWPAINANNHPASSSSGRTKGVVVNNSIGSSPSISGYSNAAMHAKGRASSSSGSGSSSRISHSASAPSLTDVAYTEPSFNDFPPVSAVAQAHRVPSNSQSARNMEDVQTANKSLVEKIRAALNFDHDTYAIFKDITAQYRLGQMDTEMYLDCVQQFGLSHLVLDLARLCPDTRKQNELVETYKASLNKDVIQENGRARDSIQIKDKSKGKKGKGKSVDVKDSSSKDKLADSILDSVRELQPSLRQTEDNVEVLSKGEYRAAKGKSKMSSDDQQGGTGGQNSQPSTGLSNQSTGDGGGGGGNKKKKKTSKFHRVRLGDGSVAALLDLKNSNPEPDPVEKEEVRNNAGALPVRGIWRNGAQKLFS 822
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37435937 37442532 + Sed0000670.1 Sed09g1333 726097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1333 822 MobiDBLite consensus disorder prediction 656 683 - -
Sed09g1333 822 MobiDBLite consensus disorder prediction 388 417 - -
Sed09g1333 822 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Sed09g1333 822 MobiDBLite consensus disorder prediction 441 483 - -
Sed09g1333 822 CDD RING-HC_ZNF598 3 54 IPR041888 -
Sed09g1333 822 MobiDBLite consensus disorder prediction 726 755 - -
Sed09g1333 822 MobiDBLite consensus disorder prediction 499 522 - -
Sed09g1333 822 MobiDBLite consensus disorder prediction 717 807 - -
Sed09g1333 822 SMART c2h2final6 252 281 IPR013087 -
Sed09g1333 822 SMART c2h2final6 221 251 IPR013087 -
Sed09g1333 822 SMART c2h2final6 108 145 IPR013087 -
Sed09g1333 822 SMART c2h2final6 197 220 IPR013087 -
Sed09g1333 822 PANTHER ZINC FINGER PROTEIN 598 1 816 IPR044288 GO:0016567(PANTHER)|GO:0043022(PANTHER)|GO:0061630(PANTHER)|GO:0061630(InterPro)|GO:0072344(PANTHER)|GO:0072344(InterPro)
Sed09g1333 822 MobiDBLite consensus disorder prediction 388 413 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0617 Sed-Chr7:4674943 Sed09g1333 Sed-Chr9:37435937 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1333 K22381 - csv:101214376 1252.27