Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1353 ATGGCGAGAACTAGGGTTCATGAGCCACTGCGAGCATTAGCGAATTTCAATAAATGCACCATTCGCCTCACTGAGATTTTCGGAAGGGCGACCAGGTTCATTTTGGGCTTCTTCATCATGGTGTGTCTTTGCAATGGCATCCATTACTTTTTGAAGCCGTTTTCTCAGCCTCAGATTAGCTCTGATACCATTGTAGGTTTGGTTGTAGGCAACCTCATAAGGAAACAACTCGAGCTACCAACGGTTAAGACCTTACGTTATATGGTTGACTTCGCTATGATATGTTATATGTTTGTGCTGGGATTGGAGATGGATCCATATGTACTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTATGCTGGAATGATTTCAACACTCATCTTAGCCTGCTCCATAACCCCATTTATCAGCTTTTCAAAGACGAAAGAGATCAGTTTCATCCTCTCCCTCTCAATTGTCCTCTCTAGCACAGCTTCTCCTGTGCTAACCCGTTCAATCACCAGCCTTAAAATAGGAAAGTCAGATATAGGCCGGCTCGTTATTGCTGCTGGAATGCATTCTGATTTTATATCGACTCTCATTATCTGTATCGGTTATCTCTTTTGCAAATGCCAAGAGACACGCATCTCCATTATAAAAGGTTTTCAATTAGGTGCTGCGTTACTGATCCAGTCAATATTTGTAGCGAAGGTTTCACCGATATTCATTAACTGGGTAAATACCGAAAACCCTGATGGTAAACCTATGAAAGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCAGCTGCCCTACTATGTTTGGTTACAATCCAATTCTCAGCGCATTCTTAGCTGGAACGTTTTTACCTCGAGAAGGTAGAGTATCGAGATGGGCAGTTGGAAAAATTAACTATCTGCTTACTACCGTGTTCTATCCCATCTTCTTCTTTTGGATGGGGGTTGAATCCAAGTTGAGTGACTTTGAACCTGAACAAATTATGACATGGGTCAGGTTAATTTTGCTTTTTGCTATTGCAACTGTAGGAAAAGTTGTTGGTACTGTCATTGCTGGGGCAATTTTGGGGTTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTATTAACCATGAAGGGCCATTTTCATATATACTTAGCCATTGCCGCACAAACAGCTGGAAAGACGACCACGTCCACTAGCATTGTGATGGTGATTGCGATATTCTTCACAATCGTGCATGCTCCAAAAGTTGTAGCACATATAATCAAAAGGGCAAGAAAACGCACACCTGCACATCGAATGGCGCTCCAATTGCTCGATCCATCAAGTGACCTTAAGCTATTGTTATGTCTACATGGACCTCAGAACACTACAGCAGCCATTAACATCATGGAGCTTTCTCGGGGTAGGGCTAACCCTGGAGTTATTGTATATGTTACAGACATGATTGAACTTACAGATGAAATAGCAGCCACATTAGTGCAAGGTGAAGGAGTGGACTCCATGACTGTAACCCACACAGGAGTGACACTAATAAGAGACCAAATTACTGCTGCAGTTCAGAGCTATGTAGATGAAAATAGAGAAGGAATTACCCTTAGAAGAATGCTAGCTCTCTCAACACTAAATAGTATGGCTCATGACATTTGCATTTTGGCCGAGGAATCGATGGGAGCTCTTATCATACTGCCATTCCATAAGACCCAGCGTGCAGATGGGTCGTTAAATGAGGGCCACACAGGCTTTCGCTACGTAAACCGTAAGGTTCTAAAGAATGCCCCCTGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGAACAGTAGAGAAAATTTCTAGGTTGTGTGTATCACAGAATGTGGCAGTCATCTTCATTGGCGGTAAAGACGACCGAGAAGCATTAGTCTATGCGGGTCGAGTATCGAGGCATCCTGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGATGCAGAAAATGCTGCAAGAAGAGCTGGGACTTACAGGGTAAGTGTTGCTGAGCAGGAAAAGGAAATGAAACTAGACGACGAATGCTTTGCTCGTTTTTATGAGCAACACGTAGCTGGTAAGCAGGTTGCTTATATCGAAAAGCACCTTGCCAGTTCCTCAGAAATGTATTCTACTTTGAAATCACTGGAAGGACAATATGCACTCATAATTGTGGGTCGAGGTGGGAAGGCGAACACGGTGTTAACTTTTGGGATGAATGACTGGCAGCAATGTCCAGAATTGGGTCCTATAGGGGATGTTCTTTCTGGGTCTGAATTTTATGTTAGGACCTCAGTTTTGATCATCCAACAACACAATCTAAAAGGAGAACTAGATGGACTTGATGATGATTTTTCTATTATGTTACCAAGAAACCAAGGATGTTAG 2397 43.14 MARTRVHEPLRALANFNKCTIRLTEIFGRATRFILGFFIMVCLCNGIHYFLKPFSQPQISSDTIVGLVVGNLIRKQLELPTVKTLRYMVDFAMICYMFVLGLEMDPYVLFKAPTRDAKVAYAGMISTLILACSITPFISFSKTKEISFILSLSIVLSSTASPVLTRSITSLKIGKSDIGRLVIAAGMHSDFISTLIICIGYLFCKCQETRISIIKGFQLGAALLIQSIFVAKVSPIFINWVNTENPDGKPMKGPHLVLAVAFMAFLCSCPTMFGYNPILSAFLAGTFLPREGRVSRWAVGKINYLLTTVFYPIFFFWMGVESKLSDFEPEQIMTWVRLILLFAIATVGKVVGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAIAAQTAGKTTTSTSIVMVIAIFFTIVHAPKVVAHIIKRARKRTPAHRMALQLLDPSSDLKLLLCLHGPQNTTAAINIMELSRGRANPGVIVYVTDMIELTDEIAATLVQGEGVDSMTVTHTGVTLIRDQITAAVQSYVDENREGITLRRMLALSTLNSMAHDICILAEESMGALIILPFHKTQRADGSLNEGHTGFRYVNRKVLKNAPCSVGILVDRGLGTVEKISRLCVSQNVAVIFIGGKDDREALVYAGRVSRHPGVKLSVIRFLVDADAENAARRAGTYRVSVAEQEKEMKLDDECFARFYEQHVAGKQVAYIEKHLASSSEMYSTLKSLEGQYALIIVGRGGKANTVLTFGMNDWQQCPELGPIGDVLSGSEFYVRTSVLIIQQHNLKGELDGLDDDFSIMLPRNQGC 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37589974 37595153 - Sed0002074.1 Sed09g1353 726117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1353 798 FunFam Cation/H(+) antiporter 28 31 430 - -
Sed09g1353 798 PANTHER CATION/H + ANTIPORTER 33 776 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Sed09g1353 798 Pfam Sodium/hydrogen exchanger family 47 420 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Sed09g1353 798 Gene3D - 30 431 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g1353 Sed-Chr9:37589974 Sed13g0816 Sed-Chr13:6035580 7.10E-85 dispersed
Sed07g0639 Sed-Chr7:4814645 Sed09g1353 Sed-Chr9:37589974 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1353 K26731 - csv:101211645 1358.58