Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g1385 | ATGGCTGATCAGGTTCAGCATCCCACCATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCAAGGGTTGCTTTGGGATTCCGTGCTAGCGATGACGGCTTTAGGAACCCTGCACTTTATCAGAGGCGGGCGTCAATGAGCAATTACTCAAATGCTGCTTTCCAATACCCTGCCGTGCAATCCTGTGTTGCTACAACTGATCTTTCTAGAGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCTGAGAAAGGAAAGTTTATAATTGACTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATCGAGCGTGTGAAGCTCTTAATCCAAAACCAGGATGAGATGCTTAAAGTTGGACGTCTATCTGAACCATACAAGGGTATTGGTGATTGTTTCAAACGTACAATTTCAGAGGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATTCGTTATTTCCCTACCCAAGCATTGAACTTTGCTTTCAAGGATTACTTTAAGAGACTTTTCAACTTCAAGAAAGACAAGGATGGCTACTGGAAATGGTTTGCTGGTAACCTTGCATCAGGTGGTGCAGCTGGTGCTTCCTCCCTTCTTTTTGTTTACTCTCTCGACTATGCTCGTACCCGGTTGGCAAACGATGCCAAGGCTGCCAAGAAGGGTGGGGAGAGGCAATTCAATGGATTGGTCGATGTCTACAGGAAGACATTGAAATCTGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTTTATACTTCGGAATGTACGATTCTCTGAAGCCCGTTCTCTTGACCGGAGACCTGCAGGATAGCTTCTTTGCTAGCTTTGCCCTCGGTTGGCTAATCACCAATGGTGCCGGGCTTGCATCGTACCCAATCGATACTGTTCGTAGAAGAATGATGATGACATCTGGTGAGGCAGTCAAGTACAAGAGCTCAATGGACGCCTTTGCCCAGATCTTGAAGAATGAGGGCGCTAAGTCTCTCTTTAAGGGTGCCGGTGCCAACATTCTTCGTGCTGTTGCGGGTGCTGGTGTGCTTGCCGGTTACGACAAGTTGCAGGTGATCGTCTTTGGCAAGAAGTATGGATCCGGTGGTGCTTAA | 1173 | 47.83 | MADQVQHPTIYQKVAGQLSLQSRVALGFRASDDGFRNPALYQRRASMSNYSNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGKFIIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKVGRLSEPYKGIGDCFKRTISEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA | 390 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37766694 | 37768372 | - | Sed0018170.1 | Sed09g1385 | 726149 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g1385 | 390 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 193 | 285 | IPR018108 | - | |
Sed09g1385 | 390 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 293 | 379 | IPR018108 | - | |
Sed09g1385 | 390 | Pfam | Mitochondrial carrier protein | 89 | 185 | IPR018108 | - | |
Sed09g1385 | 390 | Pfam | Mitochondrial carrier protein | 293 | 381 | IPR018108 | - | |
Sed09g1385 | 390 | Pfam | Mitochondrial carrier protein | 193 | 287 | IPR018108 | - | |
Sed09g1385 | 390 | PRINTS | Mitochondrial carrier protein signature | 106 | 120 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1385 | 390 | PRINTS | Mitochondrial carrier protein signature | 156 | 176 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1385 | 390 | PRINTS | Mitochondrial carrier protein signature | 258 | 276 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1385 | 390 | PRINTS | Mitochondrial carrier protein signature | 208 | 226 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1385 | 390 | PRINTS | Mitochondrial carrier protein signature | 302 | 324 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1385 | 390 | PRINTS | Mitochondrial carrier protein signature | 93 | 106 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1385 | 390 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 86 | 387 | IPR002113 | GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1385 | 390 | FunFam | ADP,ATP carrier protein, mitochondrial | 91 | 386 | - | - | |
Sed09g1385 | 390 | PRINTS | Adenine nucleotide translocator signature | 193 | 206 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1385 | 390 | PRINTS | Adenine nucleotide translocator signature | 134 | 155 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1385 | 390 | PRINTS | Adenine nucleotide translocator signature | 167 | 179 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1385 | 390 | PRINTS | Adenine nucleotide translocator signature | 90 | 102 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1385 | 390 | PRINTS | Adenine nucleotide translocator signature | 298 | 314 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1385 | 390 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 88 | 181 | IPR018108 | - | |
Sed09g1385 | 390 | Gene3D | Mitochondrial carrier domain | 91 | 386 | IPR023395 | - | |
Sed09g1385 | 390 | SUPERFAMILY | Mitochondrial carrier | 89 | 375 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g1942 | Sed-Chr5:32787849 | Sed09g1385 | Sed-Chr9:37766694 | 3.30E-157 | dispersed | |
Sed08g1770 | Sed-Chr8:32541841 | Sed09g1385 | Sed-Chr9:37766694 | 8.20E-56 | dispersed | |
Sed09g1385 | Sed-Chr9:37766694 | Sed09g1389 | Sed-Chr9:37801341 | 9.40E-216 | dispersed | |
Sed09g1385 | Sed-Chr9:37766694 | Sed09g1386 | Sed-Chr9:37771965 | 5.20E-214 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g1385 | K05863 | - | csv:101203733 | 722.62 |