Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1386 ATGGCTGATCAGGTTCAGCATCCCACCATTTATCAGAAAGTTGCTGGGCAGCTCTCTCTTCAGTCTGCTGCTTCAGGATTCCGTGCTAGCAATGATGGCTTTAGGAACCCAGCACTGTATCAGAGACGTGCAACAATCAACAATTACTCAAATGCTGCTTTCCAATACCCTGCTGTGCAATCATGTGTTGCTACAACTGATCTTTCTAGGGTTGCCTCAACCGCCTCCCCCATTTTCGTTGCAGCCCCTGCTGAGAAAGGGAAGTTTATAATAGACTTTTTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAGCGTGTCAAGCTCTTAATCCAAAACCAGGATGAGATGCTTAAAGCTGGACGTCTGTCTGAACCCTACAAGGGTATTGGTGATTGTTTCAAACGTACAATTTCAGAGGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCTAATGTCATTCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTTAAGAGACTTTTCAACTTCAAGAAAGACAAAGATGGTTACTGGAAATGGTTTGCTGGTAACCTTGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTTCTCTTTGTTTACTCTCTTGACTATGCTCGTACTCGGTTGGCAAACGATGCCAAGGCTGCCAAGAAGGGTGGTGAAAGGCAATTCAATGGATTGGTCGATGTCTACAGGAAGACATTGAAGTCTGATGGTGTTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTCTATACTTTGGAATGTACGATTCTCTGAAGCCAGTTCTCTTGACTGGGGACCTCCAGGATAGTTTCTTTGCTAGCTTTGCTCTCGGTTGGCTCATCACCAACGGTGCTGGGCTTGCATCGTACCCAATTGACACAGTTCGCAGAAGAATGATGATGACATCTGGGGAGGCAGTCAAGTACAAGAGTTCGATGGACGCCTTTGCCCAGATCTTGAAGAATGAAGGTGCCAAGTCTCTCTTTAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCCGGTGCTGGTGTGCTTGCCGGTTATGACAAGCTGCAGGTGATCGTATTCGGCAAGAAGTACGGATCTGGTGGTGGTTAA 1170 47.01 MADQVQHPTIYQKVAGQLSLQSAASGFRASNDGFRNPALYQRRATINNYSNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGKFIIDFFMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGDCFKRTISEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGG 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37771965 37774768 - Sed0018168.1 Sed09g1386 726150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1386 389 PRINTS Adenine nucleotide translocator signature 192 205 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1386 389 PRINTS Adenine nucleotide translocator signature 166 178 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1386 389 PRINTS Adenine nucleotide translocator signature 297 313 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1386 389 PRINTS Adenine nucleotide translocator signature 133 154 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1386 389 PRINTS Adenine nucleotide translocator signature 89 101 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1386 389 Gene3D Mitochondrial carrier domain 90 385 IPR023395 -
Sed09g1386 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 292 378 IPR018108 -
Sed09g1386 389 SUPERFAMILY Mitochondrial carrier 88 374 IPR023395 -
Sed09g1386 389 PRINTS Mitochondrial carrier protein signature 257 275 IPR002067 GO:0055085(InterPro)
Sed09g1386 389 PRINTS Mitochondrial carrier protein signature 301 323 IPR002067 GO:0055085(InterPro)
Sed09g1386 389 PRINTS Mitochondrial carrier protein signature 92 105 IPR002067 GO:0055085(InterPro)
Sed09g1386 389 PRINTS Mitochondrial carrier protein signature 105 119 IPR002067 GO:0055085(InterPro)
Sed09g1386 389 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085(InterPro)
Sed09g1386 389 PRINTS Mitochondrial carrier protein signature 155 175 IPR002067 GO:0055085(InterPro)
Sed09g1386 389 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 85 386 IPR002113 GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1386 389 Pfam Mitochondrial carrier protein 292 380 IPR018108 -
Sed09g1386 389 Pfam Mitochondrial carrier protein 88 184 IPR018108 -
Sed09g1386 389 Pfam Mitochondrial carrier protein 192 286 IPR018108 -
Sed09g1386 389 FunFam ADP,ATP carrier protein, mitochondrial 90 385 - -
Sed09g1386 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 87 180 IPR018108 -
Sed09g1386 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 192 284 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g1386 Sed-Chr9:37771965 Sed09g1388 Sed-Chr9:37797277 2.60E-218 dispersed
Sed09g1385 Sed-Chr9:37766694 Sed09g1386 Sed-Chr9:37771965 5.20E-214 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1386 K05863 - csv:101203733 714.146