Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g1386 | ATGGCTGATCAGGTTCAGCATCCCACCATTTATCAGAAAGTTGCTGGGCAGCTCTCTCTTCAGTCTGCTGCTTCAGGATTCCGTGCTAGCAATGATGGCTTTAGGAACCCAGCACTGTATCAGAGACGTGCAACAATCAACAATTACTCAAATGCTGCTTTCCAATACCCTGCTGTGCAATCATGTGTTGCTACAACTGATCTTTCTAGGGTTGCCTCAACCGCCTCCCCCATTTTCGTTGCAGCCCCTGCTGAGAAAGGGAAGTTTATAATAGACTTTTTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAGCGTGTCAAGCTCTTAATCCAAAACCAGGATGAGATGCTTAAAGCTGGACGTCTGTCTGAACCCTACAAGGGTATTGGTGATTGTTTCAAACGTACAATTTCAGAGGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCTAATGTCATTCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTTAAGAGACTTTTCAACTTCAAGAAAGACAAAGATGGTTACTGGAAATGGTTTGCTGGTAACCTTGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTTCTCTTTGTTTACTCTCTTGACTATGCTCGTACTCGGTTGGCAAACGATGCCAAGGCTGCCAAGAAGGGTGGTGAAAGGCAATTCAATGGATTGGTCGATGTCTACAGGAAGACATTGAAGTCTGATGGTGTTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTCTATACTTTGGAATGTACGATTCTCTGAAGCCAGTTCTCTTGACTGGGGACCTCCAGGATAGTTTCTTTGCTAGCTTTGCTCTCGGTTGGCTCATCACCAACGGTGCTGGGCTTGCATCGTACCCAATTGACACAGTTCGCAGAAGAATGATGATGACATCTGGGGAGGCAGTCAAGTACAAGAGTTCGATGGACGCCTTTGCCCAGATCTTGAAGAATGAAGGTGCCAAGTCTCTCTTTAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCCGGTGCTGGTGTGCTTGCCGGTTATGACAAGCTGCAGGTGATCGTATTCGGCAAGAAGTACGGATCTGGTGGTGGTTAA | 1170 | 47.01 | MADQVQHPTIYQKVAGQLSLQSAASGFRASNDGFRNPALYQRRATINNYSNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGKFIIDFFMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGDCFKRTISEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGG | 389 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37771965 | 37774768 | - | Sed0018168.1 | Sed09g1386 | 726150 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g1386 | 389 | PRINTS | Adenine nucleotide translocator signature | 192 | 205 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1386 | 389 | PRINTS | Adenine nucleotide translocator signature | 166 | 178 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1386 | 389 | PRINTS | Adenine nucleotide translocator signature | 297 | 313 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1386 | 389 | PRINTS | Adenine nucleotide translocator signature | 133 | 154 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1386 | 389 | PRINTS | Adenine nucleotide translocator signature | 89 | 101 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1386 | 389 | Gene3D | Mitochondrial carrier domain | 90 | 385 | IPR023395 | - | |
Sed09g1386 | 389 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 292 | 378 | IPR018108 | - | |
Sed09g1386 | 389 | SUPERFAMILY | Mitochondrial carrier | 88 | 374 | IPR023395 | - | |
Sed09g1386 | 389 | PRINTS | Mitochondrial carrier protein signature | 257 | 275 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1386 | 389 | PRINTS | Mitochondrial carrier protein signature | 301 | 323 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1386 | 389 | PRINTS | Mitochondrial carrier protein signature | 92 | 105 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1386 | 389 | PRINTS | Mitochondrial carrier protein signature | 105 | 119 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1386 | 389 | PRINTS | Mitochondrial carrier protein signature | 207 | 225 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1386 | 389 | PRINTS | Mitochondrial carrier protein signature | 155 | 175 | IPR002067 | GO:0055085(InterPro) | |
Sed09g1386 | 389 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 85 | 386 | IPR002113 | GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
Sed09g1386 | 389 | Pfam | Mitochondrial carrier protein | 292 | 380 | IPR018108 | - | |
Sed09g1386 | 389 | Pfam | Mitochondrial carrier protein | 88 | 184 | IPR018108 | - | |
Sed09g1386 | 389 | Pfam | Mitochondrial carrier protein | 192 | 286 | IPR018108 | - | |
Sed09g1386 | 389 | FunFam | ADP,ATP carrier protein, mitochondrial | 90 | 385 | - | - | |
Sed09g1386 | 389 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 87 | 180 | IPR018108 | - | |
Sed09g1386 | 389 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 192 | 284 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed09g1386 | Sed-Chr9:37771965 | Sed09g1388 | Sed-Chr9:37797277 | 2.60E-218 | dispersed | |
Sed09g1385 | Sed-Chr9:37766694 | Sed09g1386 | Sed-Chr9:37771965 | 5.20E-214 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g1386 | K05863 | - | csv:101203733 | 714.146 |