Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1389 ATGGCTGATCAGGTTCAACATCCCACCATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCAGGATTCCGTGCTAGCGAGGATGGCTTTAGGAACCCTGCCCTGTATCAGAGACGTGCAACGATCAAGAATTACTCGAATGCTGCTTTCCAATACCCTGCTGTGCAATCGTGTGTTGCTACAACCGATCTTTCTAGGGTCGCCTCAACCGCCTCCCCCATTTTCGTTGCTGCCCCTGCTGAGAAAGGAAAGTTTATAATTGACTTTTTCATGGGCGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATCGAGCGTGTGAAGCTCTTAATCCAAAACCAGGATGAGATGCTTAAAGCTGGACGTCTGTCCGAACCCTACAAGGGTATTGGTGATTGTTTCAAACGTACAATTTCAGAGGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATTCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGACAAGGATGGCTACTGGAAATGGTTTGCTGGTAACCTTGCATCAGGTGGTGCAGCTGGTGCTTCCTCCCTTCTCTTCGTTTACTCTCTCGACTATGCTCGTACCCGGTTGGCAAACGATGCCAAGGCTGCCAAGAAGGGTGGGGAAAGGCAATTCAACGGATTGGTCGATGTCTACAAGAAGACATTGCAGTCTGATGGCATTGCTGGTCTCTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTTTATACTTCGGAATGTACGATTCTTTGAAGCCCGTTCTCTTGACCGGAGACCTGCAGGATAGTTTCTTTGCTAGCTTTGCCCTCGGTTGGCTCATCACCAACGGTGCCGGGCTTGCATCGTACCCAATAGACACCGTTCGTAGAAGAATGATGATGACATCTGGTGAGGCAGTCAAGTACAAGAGCTCAATGGATGCCTTTACTCAGATCTTGAAGAACGAAGGCGCAAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTCGCTGGTTACGACAAGCTGCAGGTGATTGTCTTTGGCAAGAAGTACGGATCCGGTGGCGCTTAA 1173 49.02 MADQVQHPTIYQKVAGQLSLQSRVASGFRASEDGFRNPALYQRRATIKNYSNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGKFIIDFFMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGDCFKRTISEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFTQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37801341 37804313 - Sed0007629.1 Sed09g1389 726153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1389 390 PRINTS Adenine nucleotide translocator signature 193 206 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1389 390 PRINTS Adenine nucleotide translocator signature 90 102 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1389 390 PRINTS Adenine nucleotide translocator signature 134 155 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1389 390 PRINTS Adenine nucleotide translocator signature 167 179 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1389 390 PRINTS Adenine nucleotide translocator signature 298 314 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1389 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 88 181 IPR018108 -
Sed09g1389 390 SUPERFAMILY Mitochondrial carrier 89 375 IPR023395 -
Sed09g1389 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 285 IPR018108 -
Sed09g1389 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 293 379 IPR018108 -
Sed09g1389 390 PRINTS Mitochondrial carrier protein signature 106 120 IPR002067 GO:0055085(InterPro)
Sed09g1389 390 PRINTS Mitochondrial carrier protein signature 156 176 IPR002067 GO:0055085(InterPro)
Sed09g1389 390 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085(InterPro)
Sed09g1389 390 PRINTS Mitochondrial carrier protein signature 93 106 IPR002067 GO:0055085(InterPro)
Sed09g1389 390 PRINTS Mitochondrial carrier protein signature 208 226 IPR002067 GO:0055085(InterPro)
Sed09g1389 390 PRINTS Mitochondrial carrier protein signature 302 324 IPR002067 GO:0055085(InterPro)
Sed09g1389 390 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 86 387 IPR002113 GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Sed09g1389 390 Pfam Mitochondrial carrier protein 293 381 IPR018108 -
Sed09g1389 390 Pfam Mitochondrial carrier protein 193 287 IPR018108 -
Sed09g1389 390 Pfam Mitochondrial carrier protein 89 185 IPR018108 -
Sed09g1389 390 Gene3D Mitochondrial carrier domain 91 386 IPR023395 -
Sed09g1389 390 FunFam ADP,ATP carrier protein, mitochondrial 91 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g2136 Sed-Chr8:35355427 Sed09g1389 Sed-Chr9:37801341 2.20E-106 dispersed
Sed09g1385 Sed-Chr9:37766694 Sed09g1389 Sed-Chr9:37801341 9.40E-216 dispersed
Sed09g1389 Sed-Chr9:37801341 Sed11g0882 Sed-Chr11:21297026 1.00E-52 dispersed
Sed09g1388 Sed-Chr9:37797277 Sed09g1389 Sed-Chr9:37801341 3.60E-215 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1389 K05863 - csv:101203733 723.776