Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1401 ATGCCGGTCGGCGGCGGCTCACCTTCCTCCGCCACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCGTGGATCGTCAAACTCCTCCCCCCACAAAGGCTATACCGTACTAGGAACCAGGATCCAAAGAACGGCCATTTGAGAGAACTCGAGGGTGCGGCGGAGCGGCTCAGCTTGCACAAAGCCGACCTTCTCGATTTCGAGAGCCTCAAAGCGGCGATCGACGGCTGCGACGGCATCTTCCACACGGCCTCGCCTGTTACTGACGATCCGGAGGAAATGGTGGAGCCGGCCGTGAAGGGCACGAAGAACGTGATAAACGCGGCGGCAGAAGCCAAAGTCCGGCGTGTGGTGTTCACGTCCTCGATCGGGGCAGTGTACATGGACCCTAACCGCGGTCCAGACGAGATCGTAGACGAGTCCTGCTGGAGTGATCTCGAGTTCTGCAAGAACACCAAGGCAAAGGAGAAGGGTGTGGATTTGGTGGCTGTGAATCCAGTGTTGGTGTTGGGGCCATTGTTGCAGCCCACCATCAATGCCAGCATAGTTCATATACTCAAGTACTTGACCGGTTCGGCGAAGACGTACGCCAATTCCGTGCAGGCATACGTGCACGTGATCGATGTAGCTCTCGCTCTTGATCTTGTATACGACCCTCCCTCCGCCGCCGGCCGGTACCTCTGCGCCGAGAGTGTGCTGCATAGAGGAGAAGTTGTTGAGATCCTGGCCGAGTTGTTCCCTGGATATCCCATTCCTTCCAAGTGCTCAGATGAAGTGAATCCAAGGAAGAAGGCATACAAATTTTCAAACCAGAAGCTAAAGGAATTGGGATTGGAATTCACTCCAGTGAAGCAGTGTCTAAACGACACCCCACACCATTACAATCCCGCCTACAAAAAGAAAAGGAGATGA 915 55.63 MPVGGGSPSSATVCVTGAGGFIASWIVKLLPPQRLYRTRNQDPKNGHLRELEGAAERLSLHKADLLDFESLKAAIDGCDGIFHTASPVTDDPEEMVEPAVKGTKNVINAAAEAKVRRVVFTSSIGAVYMDPNRGPDEIVDESCWSDLEFCKNTKAKEKGVDLVAVNPVLVLGPLLQPTINASIVHILKYLTGSAKTYANSVQAYVHVIDVALALDLVYDPPSAAGRYLCAESVLHRGEVVEILAELFPGYPIPSKCSDEVNPRKKAYKFSNQKLKELGLEFTPVKQCLNDTPHHYNPAYKKKRR 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37893577 37902440 + Sed0020164.1 Sed09g1401 726165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1401 304 CDD FR_SDR_e 13 279 - -
Sed09g1401 304 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 142 IPR002225 GO:0006694(InterPro)|GO:0016616(InterPro)
Sed09g1401 304 Gene3D - 6 302 - -
Sed09g1401 304 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 294 IPR036291 -
Sed09g1401 304 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 290 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g1401 Sed-Chr9:37893577 Sed13g1498 Sed-Chr13:20200429 5.70E-59 dispersed
Sed09g1401 Sed-Chr9:37893577 Sed07g0750 Sed-Chr7:5602675 1.10E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1401 K09753 - csv:101213412 482.256