Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1567 ATGGCTGCTCCTTTGGCCTCTGTCACCTTCCAGAACGCGGCCGTGTTTCAGATCTACGCCATTCTTTCTCAGGCATTCAACTCGGGTGGTGGTGACCCTCCAAGCTATAAGGCTGCAGCATTTGGAGGATTCGGCACCGGAGCTCTACAAAGCTTCATTTTGTCGCCGGTCGAATTGGTGAAGATCCGCCTGCAATTGCTAAGTTCAAACCATTCACAGTCAAATCAACAACTAAAATCTCATTCTCACAAAGGACCTGTAAGTGTAGCTAAAAGCATCATCAAAACAGAAGGAATGAGAGGGATTTACAGAGGACTTACCATAACAATGCTGAGAGATGCTCCTGCACATGGTATCTATTTCTGGACATATGAGTGCATGAGAGAGCAGTTTCATCCGGGCTGCCGAACGACCGGCGAGGAGAGCGTCGGCACAATGCTGGTCGCGGGAGGGCTCGCGGGAGTTGCGAGCTGGGTTTTCTGTTATCCCTTGGATGTGTTGAAGACAAGAATTCAAGGTCAGACACAAAGCTCATCTCGAAAATACAATGGAATTGTTGATTGTCTTGCCAAGAGTGTGAGAGAAGACGGCTACAGAGTTCTGTGGCGAGGGCTCGAGACTGCGGTTGCTAGAGCATTCGTTGTTAATGGCGCCATTTTTGCTGCTTATGAGACAACTTTGAGGTGTTTGTTTAGCAATGGAAGCAATCAGACACAGCAATGA 723 48.27 MAAPLASVTFQNAAVFQIYAILSQAFNSGGGDPPSYKAAAFGGFGTGALQSFILSPVELVKIRLQLLSSNHSQSNQQLKSHSHKGPVSVAKSIIKTEGMRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRTTGEESVGTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSSRKYNGIVDCLAKSVREDGYRVLWRGLETAVARAFVVNGAIFAAYETTLRCLFSNGSNQTQQ 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39287303 39289184 + Sed0016744.1 Sed09g1567 726331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1567 240 ProSiteProfiles Solute carrier (Solcar) repeat profile. 34 130 IPR018108 -
Sed09g1567 240 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 230 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Sed09g1567 240 Pfam Mitochondrial carrier protein 39 131 IPR018108 -
Sed09g1567 240 Pfam Mitochondrial carrier protein 141 231 IPR018108 -
Sed09g1567 240 PRINTS Mitochondrial carrier protein signature 105 125 IPR002067 GO:0055085(InterPro)
Sed09g1567 240 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085(InterPro)
Sed09g1567 240 PRINTS Mitochondrial carrier protein signature 156 174 IPR002067 GO:0055085(InterPro)
Sed09g1567 240 PRINTS Mitochondrial carrier protein signature 52 66 IPR002067 GO:0055085(InterPro)
Sed09g1567 240 SUPERFAMILY Mitochondrial carrier 2 224 IPR023395 -
Sed09g1567 240 ProSiteProfiles Solute carrier (Solcar) repeat profile. 141 229 IPR018108 -
Sed09g1567 240 Gene3D Mitochondrial carrier domain 1 240 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g2154 Sed-Chr6:45337744 Sed09g1567 Sed-Chr9:39287303 2.00E-88 dispersed
Sed07g1470 Sed-Chr7:11345258 Sed09g1567 Sed-Chr9:39287303 4.80E-100 dispersed
Sed09g1567 Sed-Chr9:39287303 Sed12g1999 Sed-Chr12:30922909 1.20E-14 dispersed
Sed09g1566 Sed-Chr9:39287092 Sed09g1567 Sed-Chr9:39287303 5.80E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1567 K15109 - csv:101222165 394.43