Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1630 ATGGACGTTCCAAAATTTTTGCTCTTTGCTTTTCTGTGTCGCCTAGATCTCGTTAGTCTTGTTCAAGCCGAGATAGAATTAGGTTTCATAAGTTTAGATTGTGGATTGCCCTCAAAAACAAATTACACTGAACCAACATCAACAATTAACTACATTTCTGATGCTGCGTACATAAACAGTGGTGAAAGCAAAAGCTTGTCCTCTAATTATCAAAAGTTTCTACCTAAACAATATCATCATGTTAGAAGCTTTCCTCAAGGGCTTCGAAACTGTTACGGTATAACCGTAATGAAAAACACCAATTATTTGATGCGAGCAAGTTTCTTTTACGGTAACTATGATCAACTCGGTCAGCTACCGAAGTTCGATATGTACTTTGGAGATAGCTTATGGAAGACGGTTAATTTTACTAGTGAAGACATTGAAACCATCATAGAATCGATACATGCTACATCAAACAATCAAGTGCAAATTTGTCTTGTCAACAAAAACACTGGAACTCCATTCATCTCTTCATTGGAATTCAGACCTTTGCCCAAAGCGACCTACAACACTTTGACAAGATCTTTGTTGCTTTACATGCGGTTCGACTTGGGGACAACAACGAACATGACAACGTATAGGTTTCCTGATGATATTTACGACCGCTCTTGGGCGCCGTGTTCGAATTGCTACGACTGTACAAGCATAAGTACAAAAGACACAGCAGATAGAAGTAATATTTATCAGCCAAGTTATGTTGTCATGAATACAGCAGCTATCAGAAAAAATGAATCACAGCCATTAGAAATCTGGTGGGAATCAGAAGATGAAAACACTCAATATTATGTATACATGCACTTTGCTGAAGTTGAAGAACTTAGAGACAATCAAACTAGAGGGTTCAATGTCACCCATAATGGAAAATTTTGGTTTGGCCCTATAATTCTTGAGAATTACTTGTATACCACAACACTTTACAGTGAAGAGCCTTTGCTAACACCATTGAAAAAACACCTATTCTCAATTATCCCAATTGAAAATTCTACACACCCTCCTATCATCAACGCCCTAGAAGTTTATTCCGTGATCGATCTCTTAGAACTGACATCAGATGAAGGAGATGTGGATGCAATACAAAGCATCAAGGCAACTTATGGAATAGTGAGAGATTGGGAAGGAGATCCATGTGTTCCAAGAGCATACCCTTGGGAGGGTATAGATTGTAACAAAACCAATGGAACTTCTCCTAGAATCTTGTCTTTGAATTTGTCATCAAGTGGATTGGTGGGGGAGATTTCTTCAACTATATTCAATCTAAAAATGTTACAAATCTTGGACTTGTCAAACAATGAGTTGACAGGAAACATCCCTGATGTTCTGTCTATGTTATCAAATCTTAAAGTCTTGAAGTTAGATAACAACAAGCTCACAGGTTCTGTTCCATCTGAACTTGTTAAGAGACAAAAGAATGGCTCATTATCATTAAGTGTTGAAGGAAATCCAGATCTAAATTGTATATCAGAATCAGATTCATGCAAGAGTAAGAAGAAAAGTGTTGTTATTCCAATTGTAGCATCAATTGGTGGATTGGTAGTCATTGTTGTGATTGCAGTCATCATCATTTGCGTTGTGAAATTAAGGAAGAAACAGAAAAATGAAACTGTTGTTTCAGAGATAACCATGAATACCTCAGGAACCAACAACCAAATAATTAGTGATGACTTCTTAGGAACAAAGAGGAGAGCTTTTACATACTCAGAAGTGTTGAAGATGACGAACAATTTTGAAAGAGTTATAGGAAAAGGAGGTTTTGGGATAGTTTACTATGGCTTCATAGACAACATTCAAGTGGCTGTCAAGATGCTTTCTCAAGTATCAAATCAAGGTGTTCAACAGTTTCAAGCAGAGGTTAAGCTTCTGTTAAGAGTTCACCATAAAAACTTGACAAATCTTGTGGGGTATTTGAACGAAGGAGACCGTCTCGGCCTCGTTTATGAGTACATGGCCAATGGAAACTTAGCCGAGTTTCTATCAGAGAATAGTCAAAAGGTCTTAAGTTGGCAAGATAGGCTTCGGATAGCGATAGATGCAGCACACGGATTGGAGTACCTGCACGATGGTTGCAAGCCAGCCATAATCCACAGAGATGTGAAAACAACAAACATTTTATTGACAGAAAATTTGGAAGCCAAGCTTGCAGATTTTGGTTTGTCCAAAAGCTTCCCAACAGATATCAACAACAGTAGTAGCAGCTACATGTCCACCATTGTTGCTGGCACTCCTGGTTACCTGGATCCAGAGTACTACGGATCGAACCGACTAACCGAAAAGAGCGACGTGTACAGCTTCGGAGTGGCTCTACTCGAAATAATCAGCAGCAAAGCAGCAATATCAAGAACCGAACAAAGAGTTCACATCACCAAATGGGTAAGCTCAAAAGTGGCCAAAGGGGAAATCAACGGCGTAATCGACCAAAGATTGAGAGGAAAATACGATACGAACTCGGTTTGGAAGGCAGTGGAATTAGGGCGGAATTGTGTGTGTGTAAATCCTGCGAAACGGCCGTCGATGAATCAGGTGGTGGCGGAGCTGAAGAGCTGTTTGGCCGTCGAATTCGAACGGACGCCGGAAAATTGGGGGTTTGATTCCCGGAGCTCCGGCGACATGGTGTCGGTTGTTTTGGATTACAGTGGCGCCGTTCCTATGGCTAGGTGA 2697 40.04 MDVPKFLLFAFLCRLDLVSLVQAEIELGFISLDCGLPSKTNYTEPTSTINYISDAAYINSGESKSLSSNYQKFLPKQYHHVRSFPQGLRNCYGITVMKNTNYLMRASFFYGNYDQLGQLPKFDMYFGDSLWKTVNFTSEDIETIIESIHATSNNQVQICLVNKNTGTPFISSLEFRPLPKATYNTLTRSLLLYMRFDLGTTTNMTTYRFPDDIYDRSWAPCSNCYDCTSISTKDTADRSNIYQPSYVVMNTAAIRKNESQPLEIWWESEDENTQYYVYMHFAEVEELRDNQTRGFNVTHNGKFWFGPIILENYLYTTTLYSEEPLLTPLKKHLFSIIPIENSTHPPIINALEVYSVIDLLELTSDEGDVDAIQSIKATYGIVRDWEGDPCVPRAYPWEGIDCNKTNGTSPRILSLNLSSSGLVGEISSTIFNLKMLQILDLSNNELTGNIPDVLSMLSNLKVLKLDNNKLTGSVPSELVKRQKNGSLSLSVEGNPDLNCISESDSCKSKKKSVVIPIVASIGGLVVIVVIAVIIICVVKLRKKQKNETVVSEITMNTSGTNNQIISDDFLGTKRRAFTYSEVLKMTNNFERVIGKGGFGIVYYGFIDNIQVAVKMLSQVSNQGVQQFQAEVKLLLRVHHKNLTNLVGYLNEGDRLGLVYEYMANGNLAEFLSENSQKVLSWQDRLRIAIDAAHGLEYLHDGCKPAIIHRDVKTTNILLTENLEAKLADFGLSKSFPTDINNSSSSYMSTIVAGTPGYLDPEYYGSNRLTEKSDVYSFGVALLEIISSKAAISRTEQRVHITKWVSSKVAKGEINGVIDQRLRGKYDTNSVWKAVELGRNCVCVNPAKRPSMNQVVAELKSCLAVEFERTPENWGFDSRSSGDMVSVVLDYSGAVPMAR 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39760669 39771282 + Sed0027825.1 Sed09g1630 726394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1630 898 SMART serkin_6 587 862 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed09g1630 898 Pfam Leucine Rich Repeat 436 455 IPR001611 GO:0005515(InterPro)
Sed09g1630 898 Pfam Leucine Rich Repeat 459 478 IPR001611 GO:0005515(InterPro)
Sed09g1630 898 PRINTS Leucine-rich repeat signature 436 449 - -
Sed09g1630 898 PRINTS Leucine-rich repeat signature 457 470 - -
Sed09g1630 898 Gene3D Phosphorylase Kinase; domain 1 574 661 - -
Sed09g1630 898 SUPERFAMILY Protein kinase-like (PK-like) 569 858 IPR011009 -
Sed09g1630 898 PANTHER OS07G0107800 PROTEIN-RELATED 27 865 - -
Sed09g1630 898 ProSiteProfiles Leucine-rich repeat profile. 435 457 IPR001611 GO:0005515(InterPro)
Sed09g1630 898 Pfam Malectin-like domain 32 356 IPR024788 -
Sed09g1630 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed09g1630 898 ProSitePatterns Protein kinases ATP-binding region signature. 593 614 IPR017441 GO:0005524(InterPro)
Sed09g1630 898 FunFam Leucine-rich repeat receptor-like protein kinase 561 661 - -
Sed09g1630 898 CDD STKc_IRAK 593 859 - -
Sed09g1630 898 ProSiteProfiles Protein kinase domain profile. 587 862 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed09g1630 898 Pfam Protein tyrosine and serine/threonine kinase 589 858 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed09g1630 898 Gene3D Transferase(Phosphotransferase) domain 1 662 872 - -
Sed09g1630 898 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 662 870 - -
Sed09g1630 898 Gene3D Ribonuclease Inhibitor 369 496 IPR032675 -
Sed09g1630 898 FunFam Leucine-rich repeat receptor-like kinase 368 500 - -
Sed09g1630 898 SUPERFAMILY L domain-like 394 481 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1373 Sed-Chr7:10417057 Sed09g1630 Sed-Chr9:39760669 7.50E-301 dispersed
Sed07g1378 Sed-Chr7:10454282 Sed09g1630 Sed-Chr9:39760669 9.50E-255 dispersed
Sed07g1380 Sed-Chr7:10474169 Sed09g1630 Sed-Chr9:39760669 2.60E-306 dispersed
Sed07g1381 Sed-Chr7:10474169 Sed09g1630 Sed-Chr9:39760669 6.40E-223 dispersed
Sed09g1630 Sed-Chr9:39760669 Sed04g0254 Sed-Chr4:1900605 9.50E-62 dispersed
Sed09g1630 Sed-Chr9:39760669 Sed09g1631 Sed-Chr9:39775066 3.60E-263 tandem
Sed07g1376 Sed-Chr7:10440769 Sed09g1630 Sed-Chr9:39760669 8.50E-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79789 PF12819 Malectin_like 2.70E-100 CL0202 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1630 - - - 0.0