Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g1671 | ATGGCGGCTCCCATGGCCGAAGAAGAATCTAGCGATTCCTTTACCGCCACCAACACGGTGATCGCCATTAACAGGGACAAGAACAGTCAACACGCGGTGAAATGGGCTGTGGAACATCTGTTCAATCGGAAGAATTGCGGCGATTGTTTCCTCATCCATGTTCGGAGTCAGAGCTTGCATCCCCATGATGCGGAAATGGTTCCTAAGGAGTATCGTCCACCGACTGAAGCTGAGTTGCATCAGTTCTTCCTTCCTTATCGTGGATTCTGTGCACGAAAAGGAATAGTTGCAAAGGAGATTATCATCCATGACATTGATGTTCCAAGTGCACTTATTGACTTTATCAGTAAACACTCCATTAGCAATATTGTTGTGGGTGCTTCCAGCCGGAATGCTATTATGAAGAAGTTCAAACATCCCGATGTCCCGACGTGTTTGCTCAAATCAACTCCCGAATCATGTGCTGTGTATGTCATAGCTAGAGAAAAAGTTCAGACTAAGAGATTGAGAAAGCGACATAAGCCACAAACTGATGTGACCGAAAAACCATCTGAAGCTCCACATACTGACAAGTCTATATCAAAAATGGTGTATCCAAGTATCTCAGGACTCATAAAAGAAAAAGACAGGCATTGTTCTGGTAGCAGTTATGATTCACTTTCAGACAGTATTGACTTTTCAGGGCCTCTCAGTTTCAGATCAATTGGGACGTCCTCTGAGAACTCAGATTTTTCCTTAACGTCCTCAGGGGTTAATTCGAACAGCTCGATTTCCTCTAATTCCACAGCTTCCATAGAATCTGAGGTGAGAAGGTTGAGGTTTGAACTGAAGCAGACAATGGAAATGTATGAATCAGCTTGCAAGGAAGCTATAGTAGCAAATCAAAAGGGAAAAGAACTAGAACAATTGAAGATGGAAAAAGAGAATAAGTTTGAGCAAGGTAAGTCTGCCAAAGAGGTTTTAACAGCATTGGCAGAGGTTGAGAAGCAAAAGATTCGGGCTGCGACAGAAGCAGCTCTAATGGCGCAAAAGCTGGCAGAATTAGAGACCCAGAAAAAGCAAAATATTGCTGAAAGAAAGGCTAGGATTGAGGCAGAGGAGAAGAAGAAAACAATTGATTTGTTTGAACGCAATAATAACTGCTATAGGCGATACAGCATTGACGAGATCGAAGCTGCAACAGATCATTTTAATGAGTCCAACAAGATTGGTGAAGGAGGATATGGACCTGTTTATCAAGCTTTACTCGATCATACTTCTGTTGCCGTTAAGATCTTGCGACCAGATAGATCTCATGGGCAGAAACAGTTTCAGCAAGAGATCGAGGTTTTAAGTCGCATGAGGCATCCACACATGGTTCTCCTCTTAGGTGCCTGCCCAGAATATGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGCTTAGAAGACCGCCTTTTCCGAAAAGACAACACTCCTCCAATCCCTTGGAGAACTCGTTTCAGGATAGCTTCTGACATTGCCACTGCCCTTCTCTTCCTTCATCAAATGAAGCCAGAACCCGTGGTGCATCGTGATCTCAAGCCAGCCAACATTCTCTTAGACCAGAACTACGTGAGCAAAATAGGCGATGTGGGCCTGGCCAGGCTAGTTCCAGCGTCGGTTGCGGATAGCATCACTCAATATCACATGACAGCTGCAGCTGGAACGTTCTGTTACATTGATCCAGAATATCAACAAACAGGATTGTTGGGTGTGAAATCAGATATTTACTCCTTTGGTGTTTTGCTGCTCCAACTCATCACTGCAAGGTCACCAATGGGTCTTTCATATAAGATTGAGGAGGCCATTGAACATGGCACGTTTCCACAGATTCTTGATCCTACGATTACAGATTGGCCTTTGGAGGATACTCTTGGACTCGCTCAACTAGCCCTTAAATGCTGTGAGCTAAGGAAAAAAGATAGGCCGGATCTCGGTACAGTTTTATTGCCCGAACTGGTCAGGCTAAAAAATCTGGGATTGAGCCAAACACCACCGATAAGCAAGCTCCCGATTTCCAGCAAAGCATTTAATCAACGGGCCTCTAAATCAGCTCCATTTTTGAAGAGATCAGAAAATGAGGTAGTGATGAGACACAATCCTAACCTGCCAATGGAAATTCAACGTAGATCAGGGTGA | 2160 | 43.98 | MAAPMAEEESSDSFTATNTVIAINRDKNSQHAVKWAVEHLFNRKNCGDCFLIHVRSQSLHPHDAEMVPKEYRPPTEAELHQFFLPYRGFCARKGIVAKEIIIHDIDVPSALIDFISKHSISNIVVGASSRNAIMKKFKHPDVPTCLLKSTPESCAVYVIAREKVQTKRLRKRHKPQTDVTEKPSEAPHTDKSISKMVYPSISGLIKEKDRHCSGSSYDSLSDSIDFSGPLSFRSIGTSSENSDFSLTSSGVNSNSSISSNSTASIESEVRRLRFELKQTMEMYESACKEAIVANQKGKELEQLKMEKENKFEQGKSAKEVLTALAEVEKQKIRAATEAALMAQKLAELETQKKQNIAERKARIEAEEKKKTIDLFERNNNCYRRYSIDEIEAATDHFNESNKIGEGGYGPVYQALLDHTSVAVKILRPDRSHGQKQFQQEIEVLSRMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFRKDNTPPIPWRTRFRIASDIATALLFLHQMKPEPVVHRDLKPANILLDQNYVSKIGDVGLARLVPASVADSITQYHMTAAAGTFCYIDPEYQQTGLLGVKSDIYSFGVLLLQLITARSPMGLSYKIEEAIEHGTFPQILDPTITDWPLEDTLGLAQLALKCCELRKKDRPDLGTVLLPELVRLKNLGLSQTPPISKLPISSKAFNQRASKSAPFLKRSENEVVMRHNPNLPMEIQRRSG | 719 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 40101459 | 40108999 | + | Sed0007918.2 | Sed09g1671 | 726435 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g1671 | 719 | Pfam | Universal stress protein family | 20 | 135 | IPR006016 | - | |
Sed09g1671 | 719 | SMART | serkin_6 | 397 | 661 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed09g1671 | 719 | MobiDBLite | consensus disorder prediction | 167 | 191 | - | - | |
Sed09g1671 | 719 | CDD | STK_N | 19 | 161 | - | - | |
Sed09g1671 | 719 | PANTHER | OS02G0152300 PROTEIN | 21 | 691 | IPR051348 | - | |
Sed09g1671 | 719 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 515 | 527 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed09g1671 | 719 | Gene3D | Transferase(Phosphotransferase) domain 1 | 470 | 666 | - | - | |
Sed09g1671 | 719 | Pfam | Protein kinase domain | 398 | 652 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed09g1671 | 719 | Gene3D | HUPs | 7 | 160 | IPR014729 | - | |
Sed09g1671 | 719 | SUPERFAMILY | Protein kinase-like (PK-like) | 378 | 656 | IPR011009 | - | |
Sed09g1671 | 719 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 19 | 140 | - | - | |
Sed09g1671 | 719 | Coils | Coil | 346 | 366 | - | - | |
Sed09g1671 | 719 | Gene3D | Phosphorylase Kinase; domain 1 | 365 | 469 | - | - | |
Sed09g1671 | 719 | MobiDBLite | consensus disorder prediction | 174 | 189 | - | - | |
Sed09g1671 | 719 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 369 | 469 | - | - | |
Sed09g1671 | 719 | ProSiteProfiles | Protein kinase domain profile. | 397 | 661 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed09g1671 | 719 | Coils | Coil | 293 | 313 | - | - | |
Sed09g1671 | 719 | MobiDBLite | consensus disorder prediction | 243 | 262 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g0794 | Sed-Chr4:6629659 | Sed09g1671 | Sed-Chr9:40101459 | 2.5e-312 | dispersed | |
Sed09g1671 | Sed-Chr9:40101459 | Sed11g0867 | Sed-Chr11:21157119 | 1.50E-179 | dispersed | |
Sed09g1670 | Sed-Chr9:40101459 | Sed09g1671 | Sed-Chr9:40101459 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
79793 | PF00069 | Pkinase | 7.40E-42 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g1671 | - | - | - | 0.0 |