Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1671 ATGGCGGCTCCCATGGCCGAAGAAGAATCTAGCGATTCCTTTACCGCCACCAACACGGTGATCGCCATTAACAGGGACAAGAACAGTCAACACGCGGTGAAATGGGCTGTGGAACATCTGTTCAATCGGAAGAATTGCGGCGATTGTTTCCTCATCCATGTTCGGAGTCAGAGCTTGCATCCCCATGATGCGGAAATGGTTCCTAAGGAGTATCGTCCACCGACTGAAGCTGAGTTGCATCAGTTCTTCCTTCCTTATCGTGGATTCTGTGCACGAAAAGGAATAGTTGCAAAGGAGATTATCATCCATGACATTGATGTTCCAAGTGCACTTATTGACTTTATCAGTAAACACTCCATTAGCAATATTGTTGTGGGTGCTTCCAGCCGGAATGCTATTATGAAGAAGTTCAAACATCCCGATGTCCCGACGTGTTTGCTCAAATCAACTCCCGAATCATGTGCTGTGTATGTCATAGCTAGAGAAAAAGTTCAGACTAAGAGATTGAGAAAGCGACATAAGCCACAAACTGATGTGACCGAAAAACCATCTGAAGCTCCACATACTGACAAGTCTATATCAAAAATGGTGTATCCAAGTATCTCAGGACTCATAAAAGAAAAAGACAGGCATTGTTCTGGTAGCAGTTATGATTCACTTTCAGACAGTATTGACTTTTCAGGGCCTCTCAGTTTCAGATCAATTGGGACGTCCTCTGAGAACTCAGATTTTTCCTTAACGTCCTCAGGGGTTAATTCGAACAGCTCGATTTCCTCTAATTCCACAGCTTCCATAGAATCTGAGGTGAGAAGGTTGAGGTTTGAACTGAAGCAGACAATGGAAATGTATGAATCAGCTTGCAAGGAAGCTATAGTAGCAAATCAAAAGGGAAAAGAACTAGAACAATTGAAGATGGAAAAAGAGAATAAGTTTGAGCAAGGTAAGTCTGCCAAAGAGGTTTTAACAGCATTGGCAGAGGTTGAGAAGCAAAAGATTCGGGCTGCGACAGAAGCAGCTCTAATGGCGCAAAAGCTGGCAGAATTAGAGACCCAGAAAAAGCAAAATATTGCTGAAAGAAAGGCTAGGATTGAGGCAGAGGAGAAGAAGAAAACAATTGATTTGTTTGAACGCAATAATAACTGCTATAGGCGATACAGCATTGACGAGATCGAAGCTGCAACAGATCATTTTAATGAGTCCAACAAGATTGGTGAAGGAGGATATGGACCTGTTTATCAAGCTTTACTCGATCATACTTCTGTTGCCGTTAAGATCTTGCGACCAGATAGATCTCATGGGCAGAAACAGTTTCAGCAAGAGATCGAGGTTTTAAGTCGCATGAGGCATCCACACATGGTTCTCCTCTTAGGTGCCTGCCCAGAATATGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGCTTAGAAGACCGCCTTTTCCGAAAAGACAACACTCCTCCAATCCCTTGGAGAACTCGTTTCAGGATAGCTTCTGACATTGCCACTGCCCTTCTCTTCCTTCATCAAATGAAGCCAGAACCCGTGGTGCATCGTGATCTCAAGCCAGCCAACATTCTCTTAGACCAGAACTACGTGAGCAAAATAGGCGATGTGGGCCTGGCCAGGCTAGTTCCAGCGTCGGTTGCGGATAGCATCACTCAATATCACATGACAGCTGCAGCTGGAACGTTCTGTTACATTGATCCAGAATATCAACAAACAGGATTGTTGGGTGTGAAATCAGATATTTACTCCTTTGGTGTTTTGCTGCTCCAACTCATCACTGCAAGGTCACCAATGGGTCTTTCATATAAGATTGAGGAGGCCATTGAACATGGCACGTTTCCACAGATTCTTGATCCTACGATTACAGATTGGCCTTTGGAGGATACTCTTGGACTCGCTCAACTAGCCCTTAAATGCTGTGAGCTAAGGAAAAAAGATAGGCCGGATCTCGGTACAGTTTTATTGCCCGAACTGGTCAGGCTAAAAAATCTGGGATTGAGCCAAACACCACCGATAAGCAAGCTCCCGATTTCCAGCAAAGCATTTAATCAACGGGCCTCTAAATCAGCTCCATTTTTGAAGAGATCAGAAAATGAGGTAGTGATGAGACACAATCCTAACCTGCCAATGGAAATTCAACGTAGATCAGGGTGA 2160 43.98 MAAPMAEEESSDSFTATNTVIAINRDKNSQHAVKWAVEHLFNRKNCGDCFLIHVRSQSLHPHDAEMVPKEYRPPTEAELHQFFLPYRGFCARKGIVAKEIIIHDIDVPSALIDFISKHSISNIVVGASSRNAIMKKFKHPDVPTCLLKSTPESCAVYVIAREKVQTKRLRKRHKPQTDVTEKPSEAPHTDKSISKMVYPSISGLIKEKDRHCSGSSYDSLSDSIDFSGPLSFRSIGTSSENSDFSLTSSGVNSNSSISSNSTASIESEVRRLRFELKQTMEMYESACKEAIVANQKGKELEQLKMEKENKFEQGKSAKEVLTALAEVEKQKIRAATEAALMAQKLAELETQKKQNIAERKARIEAEEKKKTIDLFERNNNCYRRYSIDEIEAATDHFNESNKIGEGGYGPVYQALLDHTSVAVKILRPDRSHGQKQFQQEIEVLSRMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFRKDNTPPIPWRTRFRIASDIATALLFLHQMKPEPVVHRDLKPANILLDQNYVSKIGDVGLARLVPASVADSITQYHMTAAAGTFCYIDPEYQQTGLLGVKSDIYSFGVLLLQLITARSPMGLSYKIEEAIEHGTFPQILDPTITDWPLEDTLGLAQLALKCCELRKKDRPDLGTVLLPELVRLKNLGLSQTPPISKLPISSKAFNQRASKSAPFLKRSENEVVMRHNPNLPMEIQRRSG 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40101459 40108999 + Sed0007918.2 Sed09g1671 726435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1671 719 Pfam Universal stress protein family 20 135 IPR006016 -
Sed09g1671 719 SMART serkin_6 397 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed09g1671 719 MobiDBLite consensus disorder prediction 167 191 - -
Sed09g1671 719 CDD STK_N 19 161 - -
Sed09g1671 719 PANTHER OS02G0152300 PROTEIN 21 691 IPR051348 -
Sed09g1671 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed09g1671 719 Gene3D Transferase(Phosphotransferase) domain 1 470 666 - -
Sed09g1671 719 Pfam Protein kinase domain 398 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed09g1671 719 Gene3D HUPs 7 160 IPR014729 -
Sed09g1671 719 SUPERFAMILY Protein kinase-like (PK-like) 378 656 IPR011009 -
Sed09g1671 719 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 140 - -
Sed09g1671 719 Coils Coil 346 366 - -
Sed09g1671 719 Gene3D Phosphorylase Kinase; domain 1 365 469 - -
Sed09g1671 719 MobiDBLite consensus disorder prediction 174 189 - -
Sed09g1671 719 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 369 469 - -
Sed09g1671 719 ProSiteProfiles Protein kinase domain profile. 397 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed09g1671 719 Coils Coil 293 313 - -
Sed09g1671 719 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0794 Sed-Chr4:6629659 Sed09g1671 Sed-Chr9:40101459 2.5e-312 dispersed
Sed09g1671 Sed-Chr9:40101459 Sed11g0867 Sed-Chr11:21157119 1.50E-179 dispersed
Sed09g1670 Sed-Chr9:40101459 Sed09g1671 Sed-Chr9:40101459 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79793 PF00069 Pkinase 7.40E-42 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1671 - - - 0.0