Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1672 ATGGCGAACCGTTCTTCCGATCGCGAAATCGATCACGTCTCTCCTCAATCACGTCTCTACAATCCCTACAAGGATCTCCCAAATCCTTACCGAAACTTCCAGCTTCCAACCTCTCCAGAGTTTCTCTTCGACGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACCGGTTGCGGGTACCTCGCCGGAGCCGTCGGCGGCGCGTCTACCGGCTTTGTCACCGGCGTCAAATCCTTCGAATCGGGCGATACTACGAAGCTCCGGATCAATCGGATCCTGAACTCTTCTGGCCATTCAGGTCGTTTATGGGGGAATCGGCTCGGCGTGATTGGTTTGCTATACGCTGGTTTGGAGAGCGGGACTGAGGCTTTGAGGGATACGGATGATGTGTGGAACTGCGTTGCTGCTGGACTCGGCACCGGTGCGCTTTATCGCGCGGCGAGAGGAGTGAGATCGGCGGCGGTGGCCGGTGCTATTGGCGGCGTTGTGGTCGGAGTTGCGGTTACGGGTAAGCAGATTTTGAAACGGTATATAAACATGAAAGATATGCTTTGA 573 55.5 MANRSSDREIDHVSPQSRLYNPYKDLPNPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGFVTGVKSFESGDTTKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGTEALRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGVAVTGKQILKRYINMKDML 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40110053 40112106 + Sed0001738.1 Sed09g1672 726436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1672 190 MobiDBLite consensus disorder prediction 1 21 - -
Sed09g1672 190 PANTHER TIM23 33 173 IPR045238 GO:0005744(PANTHER)|GO:0008320(PANTHER)|GO:0022857(InterPro)|GO:0030150(PANTHER)|GO:0031305(PANTHER)
Sed09g1672 190 Pfam Tim17/Tim22/Tim23/Pmp24 family 59 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0682 Sed-Chr6:6474295 Sed09g1672 Sed-Chr9:40110053 4.90E-50 transposed
Sed04g0795 Sed-Chr4:6637170 Sed09g1672 Sed-Chr9:40110053 1.40E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1672 K17794 - csv:101221925 301.982