Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed09g1684 | ATGAAATTTTTCTTCGGAATTGGGGCTTTGATGGGGTTTCGATCACTGTTTCTGATGCTTGGAATTTGTTTTGCTGTTGGGGTTTTCTCTGTTTGTGAAGCTGCAGTTATCATCCCGAGCCGGCAAAGTGGAGCGCGTTCTGTGCTCACAGATTATGCTGTCACTCCTACATCTCATGGCTTTGGCAGGAAACACCATAGCAGGATGGATAATGCAGTTCCTAGCAAGCTTTTTAAAAGTTCATATCCTCAGATCCACTCTCATTTTAAAGCCATTCAATCAGACGATTTGAGTAGGGCTCCTAGCATTGCAGTCCCACCTACCGCGCCTGCTAAGAAATGGGCGGGCAATCATCCATTGATACCCTTTCACAAATTTCACCATTCAAGAAGGAAGTTCAGAAACCATGCTCCACGGCCTGCTTATCGTGGATCACCCCCGTCTAGTGGCCAGCAAGGCCCTGCCGCTGTCTCTCCAATTCAGTCACCACTACCATCTGCTGCGAGATGGAGGTCACCTGGACCTGCACCATCACCAACGATTCAACCGAGCCACTACTATATGCCCCTTCCTGCTCCTACAACTTCTCCCATGGGTTCTTACAAGAAGAGAAAGAAGAGCATGCCACCATCACAAGTTATGGTGCTACCACCTCCACCTCCCAATGGGGAATGCATGATATCATGTACAGAACCACTAACCTTTACGCCTCCCGGGATTCCGTGTGGTTGTGTATGGCCAATTCAAGTCAAAATCAGCCTTGATGTTGCAATATACACATTCTTCCCTCTGGTTTCGGAGCTTGCAAAGGAAATTGCAAACAGCGTCGGTCTGAACCATAGCCAAGTTCGTATTATGGGAGCTGATGCTGCTAGTCCGCAGTTAGAAAAGACAACCGTCCTTGTCAACTTGGTACCGAGAGGATCGAAATTCAATTATACCACCGCCCTTTCGATATATCAGAAATTTTGGCTGAGAAAGATATCTATCAACGCTTCTTTGTTTCGTAGATATCAAGTGCTAAATGTTAAATATCCAGGTCTTCCACCATCTCCTCCGTTGCCGCCTTTCAGTACTTCATCCATTAATGACGGTTTGAACGCTAGCAATACTAATGCTGGAAGTGCAATAAAACCATTGGGAGTTGACGTGCCGAGAAGAAGAAAAGAAGGGCTTAGTGGAAACATGATTGCGGTGGTTACTATATCGTCGTTCACTGCCCTTGTTGTGTGTGTTGGACTTGCGTGGCTTTGCCTCTTGAGATGCAAACTATCTGCACATCAACCAGCACAAGTTCCACAAATCTTGATAGACTCACCTACAAAACCATCAGGCACTGATGGATTTATACTGGTTGGAAGTGAACTTGGTTCTTCATCCATGCCTCTAAATTCCGATCCTATGACGTATATTGGAGCAGCAAAGAACTTCACATTGAAAGATATGGAGAAAGCCACTGACAACTTTGATGCCCCAAGAATATTGGGGGAAGGTGGCTTTGGAATTGTCTACAGTGGCAGTTTAGATGATGGTAGGGAAGTGGCTGTGAAGGTTCTCAAAAGATATAGTCAACACGGTATTCGAGAATTCTTGGCTGAAGTCGAGATGCTGAGCCGTTTACACCATAGAAATCTAGTTAAGTTGATTGGTATCTGTACAGAAGATCAGATTCGCTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTCGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGACGCCCGCATGAAGATTGCCCTCGGTGCTGCTCGAGGTCTAGCCTATCTGCACGAAGACTCCAATCCTCGAGTTATCCATCGAGATTTCAAAGCTAGCAACATCTTGTTAGAATTTGACTTTACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGTTATCTTGCTCCAGAATATGCAATGACTGGCCATCTTCTTGTAAAGAGTGACGTCTACAGCTACGGTGTTGTTCTTCTTGAGTTACTTACAGGAAGAAAGCCCGTTGACTTGTCGCTTCCTCCCGGGCAAGAAAATCTCGTTTCTTGGGCTCGTCCACTTCTCACGAGCAAGGAGGGGTTAGATGTAATAACAGATCCAGCTATTAAGTCTGATATATCCATTGATAGCTTGGCCAGAGTAGCAGCAATTGCTTCTATGTGTGTGCAACTAGAAGTGTCTCACAGACCGTTTATGGGTGAGGTTGTTCAAGCTCTAAAGCTTGTTTGCAATGAGTTTGAAGAGACGAACGAGCCAGGTTCCCGAAGTTACAGCCGAGACGAACTTTTAAGTTACATGGATAGCAAATTTGGAGGAATTTCAGGTGAAATTCTAAATAATGCTACCGAGACCTCGCACCCGTTTCCTTCAGAAAAGGAGGCGAACATAGGATTATCGGCATCGGAATTAATCAGCGCATCTGCAAGATTTGAAGGACAGGAACTGGTTTCTTCGAGATGGCATTCATCGAACTCGGAACCGTTGAGAATGGGAAGAAAAATTAAGTTCTGGTACAAGCTTAGAAGTTTGTCAAGAGGCAGCATTAGTGAACATGGCTTTTCTTCAAAGCTCTGGCCTAGATTTCGTTAG | 2658 | 45.0 | MKFFFGIGALMGFRSLFLMLGICFAVGVFSVCEAAVIIPSRQSGARSVLTDYAVTPTSHGFGRKHHSRMDNAVPSKLFKSSYPQIHSHFKAIQSDDLSRAPSIAVPPTAPAKKWAGNHPLIPFHKFHHSRRKFRNHAPRPAYRGSPPSSGQQGPAAVSPIQSPLPSAARWRSPGPAPSPTIQPSHYYMPLPAPTTSPMGSYKKRKKSMPPSQVMVLPPPPPNGECMISCTEPLTFTPPGIPCGCVWPIQVKISLDVAIYTFFPLVSELAKEIANSVGLNHSQVRIMGADAASPQLEKTTVLVNLVPRGSKFNYTTALSIYQKFWLRKISINASLFRRYQVLNVKYPGLPPSPPLPPFSTSSINDGLNASNTNAGSAIKPLGVDVPRRRKEGLSGNMIAVVTISSFTALVVCVGLAWLCLLRCKLSAHQPAQVPQILIDSPTKPSGTDGFILVGSELGSSSMPLNSDPMTYIGAAKNFTLKDMEKATDNFDAPRILGEGGFGIVYSGSLDDGREVAVKVLKRYSQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEFDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVSWARPLLTSKEGLDVITDPAIKSDISIDSLARVAAIASMCVQLEVSHRPFMGEVVQALKLVCNEFEETNEPGSRSYSRDELLSYMDSKFGGISGEILNNATETSHPFPSEKEANIGLSASELISASARFEGQELVSSRWHSSNSEPLRMGRKIKFWYKLRSLSRGSISEHGFSSKLWPRFR | 885 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 40185063 | 40189579 | + | Sed0017247.1 | Sed09g1684 | 726448 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed09g1684 | 885 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 565 | 782 | - | - | |
Sed09g1684 | 885 | FunFam | receptor-like serine/threonine-protein kinase ALE2 | 462 | 564 | - | - | |
Sed09g1684 | 885 | Gene3D | Transferase(Phosphotransferase) domain 1 | 565 | 783 | - | - | |
Sed09g1684 | 885 | MobiDBLite | consensus disorder prediction | 145 | 159 | - | - | |
Sed09g1684 | 885 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 611 | 623 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed09g1684 | 885 | Gene3D | Phosphorylase Kinase; domain 1 | 460 | 564 | - | - | |
Sed09g1684 | 885 | MobiDBLite | consensus disorder prediction | 130 | 189 | - | - | |
Sed09g1684 | 885 | CDD | STKc_IRAK | 495 | 763 | - | - | |
Sed09g1684 | 885 | PANTHER | OS01G0750732 PROTEIN | 227 | 785 | IPR050885 | - | |
Sed09g1684 | 885 | Pfam | Protein tyrosine and serine/threonine kinase | 493 | 762 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed09g1684 | 885 | ProSiteProfiles | Protein kinase domain profile. | 489 | 770 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed09g1684 | 885 | ProSitePatterns | Protein kinases ATP-binding region signature. | 495 | 517 | IPR017441 | GO:0005524(InterPro) | |
Sed09g1684 | 885 | SUPERFAMILY | Protein kinase-like (PK-like) | 467 | 762 | IPR011009 | - | |
Sed09g1684 | 885 | MobiDBLite | consensus disorder prediction | 170 | 186 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g1325 | Sed-Chr7:10123823 | Sed09g1684 | Sed-Chr9:40185063 | 0.00E+00 | dispersed | |
Sed07g1326 | Sed-Chr7:10123823 | Sed09g1684 | Sed-Chr9:40185063 | 0.00E+00 | dispersed | |
Sed07g1330 | Sed-Chr7:10125157 | Sed09g1684 | Sed-Chr9:40185063 | 0.00E+00 | dispersed | |
Sed07g1331 | Sed-Chr7:10125157 | Sed09g1684 | Sed-Chr9:40185063 | 0.00E+00 | dispersed | |
Sed09g1684 | Sed-Chr9:40185063 | Sed12g1762 | Sed-Chr12:28729590 | 3.10E-206 | dispersed | |
Sed07g1324 | Sed-Chr7:10123823 | Sed09g1684 | Sed-Chr9:40185063 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
79794 | PF07714 | PK_Tyr_Ser-Thr | 6.20E-46 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed09g1684 | - | - | - | 0.0 |