Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1684 ATGAAATTTTTCTTCGGAATTGGGGCTTTGATGGGGTTTCGATCACTGTTTCTGATGCTTGGAATTTGTTTTGCTGTTGGGGTTTTCTCTGTTTGTGAAGCTGCAGTTATCATCCCGAGCCGGCAAAGTGGAGCGCGTTCTGTGCTCACAGATTATGCTGTCACTCCTACATCTCATGGCTTTGGCAGGAAACACCATAGCAGGATGGATAATGCAGTTCCTAGCAAGCTTTTTAAAAGTTCATATCCTCAGATCCACTCTCATTTTAAAGCCATTCAATCAGACGATTTGAGTAGGGCTCCTAGCATTGCAGTCCCACCTACCGCGCCTGCTAAGAAATGGGCGGGCAATCATCCATTGATACCCTTTCACAAATTTCACCATTCAAGAAGGAAGTTCAGAAACCATGCTCCACGGCCTGCTTATCGTGGATCACCCCCGTCTAGTGGCCAGCAAGGCCCTGCCGCTGTCTCTCCAATTCAGTCACCACTACCATCTGCTGCGAGATGGAGGTCACCTGGACCTGCACCATCACCAACGATTCAACCGAGCCACTACTATATGCCCCTTCCTGCTCCTACAACTTCTCCCATGGGTTCTTACAAGAAGAGAAAGAAGAGCATGCCACCATCACAAGTTATGGTGCTACCACCTCCACCTCCCAATGGGGAATGCATGATATCATGTACAGAACCACTAACCTTTACGCCTCCCGGGATTCCGTGTGGTTGTGTATGGCCAATTCAAGTCAAAATCAGCCTTGATGTTGCAATATACACATTCTTCCCTCTGGTTTCGGAGCTTGCAAAGGAAATTGCAAACAGCGTCGGTCTGAACCATAGCCAAGTTCGTATTATGGGAGCTGATGCTGCTAGTCCGCAGTTAGAAAAGACAACCGTCCTTGTCAACTTGGTACCGAGAGGATCGAAATTCAATTATACCACCGCCCTTTCGATATATCAGAAATTTTGGCTGAGAAAGATATCTATCAACGCTTCTTTGTTTCGTAGATATCAAGTGCTAAATGTTAAATATCCAGGTCTTCCACCATCTCCTCCGTTGCCGCCTTTCAGTACTTCATCCATTAATGACGGTTTGAACGCTAGCAATACTAATGCTGGAAGTGCAATAAAACCATTGGGAGTTGACGTGCCGAGAAGAAGAAAAGAAGGGCTTAGTGGAAACATGATTGCGGTGGTTACTATATCGTCGTTCACTGCCCTTGTTGTGTGTGTTGGACTTGCGTGGCTTTGCCTCTTGAGATGCAAACTATCTGCACATCAACCAGCACAAGTTCCACAAATCTTGATAGACTCACCTACAAAACCATCAGGCACTGATGGATTTATACTGGTTGGAAGTGAACTTGGTTCTTCATCCATGCCTCTAAATTCCGATCCTATGACGTATATTGGAGCAGCAAAGAACTTCACATTGAAAGATATGGAGAAAGCCACTGACAACTTTGATGCCCCAAGAATATTGGGGGAAGGTGGCTTTGGAATTGTCTACAGTGGCAGTTTAGATGATGGTAGGGAAGTGGCTGTGAAGGTTCTCAAAAGATATAGTCAACACGGTATTCGAGAATTCTTGGCTGAAGTCGAGATGCTGAGCCGTTTACACCATAGAAATCTAGTTAAGTTGATTGGTATCTGTACAGAAGATCAGATTCGCTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTCGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGACGCCCGCATGAAGATTGCCCTCGGTGCTGCTCGAGGTCTAGCCTATCTGCACGAAGACTCCAATCCTCGAGTTATCCATCGAGATTTCAAAGCTAGCAACATCTTGTTAGAATTTGACTTTACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGTTATCTTGCTCCAGAATATGCAATGACTGGCCATCTTCTTGTAAAGAGTGACGTCTACAGCTACGGTGTTGTTCTTCTTGAGTTACTTACAGGAAGAAAGCCCGTTGACTTGTCGCTTCCTCCCGGGCAAGAAAATCTCGTTTCTTGGGCTCGTCCACTTCTCACGAGCAAGGAGGGGTTAGATGTAATAACAGATCCAGCTATTAAGTCTGATATATCCATTGATAGCTTGGCCAGAGTAGCAGCAATTGCTTCTATGTGTGTGCAACTAGAAGTGTCTCACAGACCGTTTATGGGTGAGGTTGTTCAAGCTCTAAAGCTTGTTTGCAATGAGTTTGAAGAGACGAACGAGCCAGGTTCCCGAAGTTACAGCCGAGACGAACTTTTAAGTTACATGGATAGCAAATTTGGAGGAATTTCAGGTGAAATTCTAAATAATGCTACCGAGACCTCGCACCCGTTTCCTTCAGAAAAGGAGGCGAACATAGGATTATCGGCATCGGAATTAATCAGCGCATCTGCAAGATTTGAAGGACAGGAACTGGTTTCTTCGAGATGGCATTCATCGAACTCGGAACCGTTGAGAATGGGAAGAAAAATTAAGTTCTGGTACAAGCTTAGAAGTTTGTCAAGAGGCAGCATTAGTGAACATGGCTTTTCTTCAAAGCTCTGGCCTAGATTTCGTTAG 2658 45.0 MKFFFGIGALMGFRSLFLMLGICFAVGVFSVCEAAVIIPSRQSGARSVLTDYAVTPTSHGFGRKHHSRMDNAVPSKLFKSSYPQIHSHFKAIQSDDLSRAPSIAVPPTAPAKKWAGNHPLIPFHKFHHSRRKFRNHAPRPAYRGSPPSSGQQGPAAVSPIQSPLPSAARWRSPGPAPSPTIQPSHYYMPLPAPTTSPMGSYKKRKKSMPPSQVMVLPPPPPNGECMISCTEPLTFTPPGIPCGCVWPIQVKISLDVAIYTFFPLVSELAKEIANSVGLNHSQVRIMGADAASPQLEKTTVLVNLVPRGSKFNYTTALSIYQKFWLRKISINASLFRRYQVLNVKYPGLPPSPPLPPFSTSSINDGLNASNTNAGSAIKPLGVDVPRRRKEGLSGNMIAVVTISSFTALVVCVGLAWLCLLRCKLSAHQPAQVPQILIDSPTKPSGTDGFILVGSELGSSSMPLNSDPMTYIGAAKNFTLKDMEKATDNFDAPRILGEGGFGIVYSGSLDDGREVAVKVLKRYSQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEFDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVSWARPLLTSKEGLDVITDPAIKSDISIDSLARVAAIASMCVQLEVSHRPFMGEVVQALKLVCNEFEETNEPGSRSYSRDELLSYMDSKFGGISGEILNNATETSHPFPSEKEANIGLSASELISASARFEGQELVSSRWHSSNSEPLRMGRKIKFWYKLRSLSRGSISEHGFSSKLWPRFR 885
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40185063 40189579 + Sed0017247.1 Sed09g1684 726448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1684 885 FunFam Receptor-like serine/threonine-protein kinase ALE2 565 782 - -
Sed09g1684 885 FunFam receptor-like serine/threonine-protein kinase ALE2 462 564 - -
Sed09g1684 885 Gene3D Transferase(Phosphotransferase) domain 1 565 783 - -
Sed09g1684 885 MobiDBLite consensus disorder prediction 145 159 - -
Sed09g1684 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed09g1684 885 Gene3D Phosphorylase Kinase; domain 1 460 564 - -
Sed09g1684 885 MobiDBLite consensus disorder prediction 130 189 - -
Sed09g1684 885 CDD STKc_IRAK 495 763 - -
Sed09g1684 885 PANTHER OS01G0750732 PROTEIN 227 785 IPR050885 -
Sed09g1684 885 Pfam Protein tyrosine and serine/threonine kinase 493 762 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed09g1684 885 ProSiteProfiles Protein kinase domain profile. 489 770 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed09g1684 885 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524(InterPro)
Sed09g1684 885 SUPERFAMILY Protein kinase-like (PK-like) 467 762 IPR011009 -
Sed09g1684 885 MobiDBLite consensus disorder prediction 170 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1325 Sed-Chr7:10123823 Sed09g1684 Sed-Chr9:40185063 0.00E+00 dispersed
Sed07g1326 Sed-Chr7:10123823 Sed09g1684 Sed-Chr9:40185063 0.00E+00 dispersed
Sed07g1330 Sed-Chr7:10125157 Sed09g1684 Sed-Chr9:40185063 0.00E+00 dispersed
Sed07g1331 Sed-Chr7:10125157 Sed09g1684 Sed-Chr9:40185063 0.00E+00 dispersed
Sed09g1684 Sed-Chr9:40185063 Sed12g1762 Sed-Chr12:28729590 3.10E-206 dispersed
Sed07g1324 Sed-Chr7:10123823 Sed09g1684 Sed-Chr9:40185063 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79794 PF07714 PK_Tyr_Ser-Thr 6.20E-46 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1684 - - - 0.0