Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed09g1689 | ATGGACAGTTTATGGGATGTTGTGGTAGTGACAACCATCTTTTTGACCACCATTATTCTCTATAGGAATTGCTTTAGACTTTTCAGATCAAAATTCTGCAACCAACTTCCTTTAGGCTCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATTGCTTGTGCTTATTCCGACCGCCCTGAAACCTTCATGGACAAGCGTCGCCGACTGTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGCCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAGTGTGATGCCAAGGCTTTCATACCATCTTACCCGAAATCCTTGACGAAGTTGATGGGGAGATCTTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTTGGAGCTTTCTTCAAGTCTTCACTGCTTAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTGTCAATGGAAAATTGGACTGAAACCAATCCTATTTACCTTCAAGATGAAACCAAAAATATTGCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGGATGGAGTTTCTCAAGCAACAGTTTCAAGAATTCATCGCGGGGCTCATGGCTTTACCGGTGATCATACCCGGAAGCACGCTTTACCGATCGTTGCAGGCCAAAAGGATTATGGTTGAACTTGTAAAAAAGATAATACAAGAAAAAAAAGGCAGTGGAATTTCCCCTGTCCCAAAAGATGTGATGGAAGTTTTGCTCAAAGATGAAAGTGGACAACTAACAGATGATCTAATAGCAGGGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCCGATTGCCCTGCCGCACTTCGACAATTAACGGAGGAAAACTTGAAGATGAAAAAAGTCAAAGAGCAGCTCGGAGAGCCGTTGCATTGGAGCGATTACTTATCGTCGCTCCCATTTACGCAAAGTGTGATCACGGAGACGCTACGGATGGGAAACATCATAATTGGGGTGATGAGGAAGGCCATGAAAGACATGAAGATAAAAGGATACAGAATACCGAAAGGTTGGTCGGTACTTACGTACTTTAGATCTGTTCATCTCGACGACAGTCTCTATGAATGGCCTTACAAATTCAATCCATGGAGGTGGCAAGAGAGAGACTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTGGCTAGGCTTGAAGCTTCCATTTTCCTTCATCACTTTGTCACTCAGTTCAGATGGATTGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAGAGAATGCCAGTTTGGGTGAAGAGAATAAGGGACCCATGA | 1428 | 42.16 | MDSLWDVVVVTTIFLTTIILYRNCFRLFRSKFCNQLPLGSLGWPFIGETIEFIACAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQCDAKAFIPSYPKSLTKLMGRSSILLINGSLQKRIHGLVGAFFKSSLLKAQITKDMECYVKLSMENWTETNPIYLQDETKNIAFQVLVKILISLNPGQRMEFLKQQFQEFIAGLMALPVIIPGSTLYRSLQAKRIMVELVKKIIQEKKGSGISPVPKDVMEVLLKDESGQLTDDLIAGNMIDMMIPGEDSVPILMTLAVKYLSDCPAALRQLTEENLKMKKVKEQLGEPLHWSDYLSSLPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYRIPKGWSVLTYFRSVHLDDSLYEWPYKFNPWRWQERDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWIAEEDRIINFPTVRMKKRMPVWVKRIRDP | 475 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 40232290 | 40236337 | + | Sed0009225.1 | Sed09g1689 | 726453 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed09g1689 | 475 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 28 | 472 | - | - | |
| Sed09g1689 | 475 | PRINTS | E-class P450 group I signature | 423 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed09g1689 | 475 | PRINTS | E-class P450 group I signature | 341 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed09g1689 | 475 | PRINTS | E-class P450 group I signature | 413 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed09g1689 | 475 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed09g1689 | 475 | PRINTS | E-class P450 group I signature | 381 | 405 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed09g1689 | 475 | PANTHER | CYTOCHROME P450 26 | 35 | 448 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Sed09g1689 | 475 | Gene3D | Cytochrome P450 | 30 | 472 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed09g1689 | 475 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 416 | 425 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed09g1689 | 475 | SUPERFAMILY | Cytochrome P450 | 35 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed09g1689 | 475 | CDD | CYP90-like | 68 | 467 | - | - | |
| Sed09g1689 | 475 | Pfam | Cytochrome P450 | 38 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed04g2894 | Sed-Chr4:40614330 | Sed09g1689 | Sed-Chr9:40232290 | 2.30E-99 | dispersed | |
| Sed07g2562 | Sed-Chr7:41160663 | Sed09g1689 | Sed-Chr9:40232290 | 6.80E-99 | dispersed | |
| Sed09g1689 | Sed-Chr9:40232290 | Sed14g1163 | Sed-Chr14:20979121 | 1.90E-138 | dispersed | |
| Sed06g0086 | Sed-Chr6:528307 | Sed09g1689 | Sed-Chr9:40232290 | 1.90E-151 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed09g1689 | K12638 | - | csv:101217830 | 797.349 |