Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed09g1717 ATGGCTTCTCTTCCTTTCTCTCTCCTTATTTTCTTTCTCCTCCTCCCACTTTCTTCCTCAAAGCAAACCTTCATTGTTCAAATCCACAGCCATGAATCCAAACCCTCCATTTTCCCAACCCACAAACACTGGTACGAGTCATCTCTTTCCCAAGCAACCATCATCCACACCTACCAAACACTCTTCCATGGCTTCTCAGCAAAGCTCTCCCCTTCAGAGCTCGAAAACCTTCAAGCCCTTCCCCACATCGCCTCCATCATCCCCGAACAGGTTCGCCATCTTCACACGACTCGCTCCCCTGAGTTTCTCGGTCTCAAAACCACCGACAGCGCCGGTCTCCTTAAAGAATCCGACTTCGGATCTGACTTAGTCATCGGAGTCATCGACACCGGAATCTGGCCGGAGCGGTCGAGCTTCAACGACAAGGATCTGGGTCCCATCCCTTCCAAATGGAAAGGCCAGTGCGTTGCGGCTAAGGACTTTCCGGCCACGTCTTGCAACCGGAAACTCATTGGGGCTAGATTTTTCAGCAATGGGTTTGAGGCAACTAATGGGAAGATGAATGAGACGACCGAGTTCCGGTCGCCTCGAGATTCCGATGGCCATGGAACTCATACAGCTTCCATTGCTGCAGGTCGTTACGTGTTTCCGGCTTCGACTTTGGGCTATGCTCGTGGTAAAGCTGCGGGGATGGCTCCTAAGGCTCGTCTTGCTGCTTATAAGGTGTGTTGGAGTGCTGGTTGTTATGATTCTGATATTCTTGCTGCTTTTGATGCTGCTGTTGCTGATGGTGTTGATGTTGTTTCGCTCAGCGTCGGCGGCGTCGTTGTGCCGTATTATCTCGACGCCATTGCTATTGGGGCTTTTAGAGCTGTGGCGTCTGGGGTTTTCGTCTCGGCGTCGGCCGGGAATGGTGGACCTGGGGGGCTTACTGTGACTAATATAGCACCGTGGGTTACCACGGTTGGAGCTGGAACTATGGATAGGGATTTCCCTGCTGATGTTCAGCTGGGAAATGGTAGGGTTGTACTTGGAACTAGTGTGTATGCCGGTCCGGGTTTGGTTCCGGGTCGTTTATATCCGCTTATTTATGCAGGAACTGAGGGTGGTAATGGGTATTCTTCGTCTCTATGTTTGGAAGGTTCGTTGGACTCCAATTTAGTGGGAGGGAAAATTGTGTTGTGTGATAGGGGTATAAATTCTAGAGCTGCTAAAGGGGAGGTTGTGAAGAAGGCTGGAGGATTGGGAATGATATTAGCTAATGGGGTCTTTGATGGTGAAGGTTTAGTGGCTGACTGCCATGTACTACCTGCCACCTCTGTCGGGGCCACGGCTGGCGATGAGATTCGTAAATACATTGCAGAAGCAGTGAAGTCTCCGTCGCCACCAACGGCTACAATTTTGTTCAAGGGAACTCGGCTTGGAGTCAGGCCGGCACCGGTTGTTGCTTCGTTTTCAGCTCGAGGTCCTAATCCGGAGTCCCCTGAAATTGTGAAGCCTGATGTTATTGCGCCTGGTTTGAACATTCTTGCTGCTTGGCCTGATAGAATTGGACCTTCTGGAATTCCTACAGACAAGCGTACCACAGAGTTCAATATACTTTCGGGCACTTCAATGGCTTGTCCGCATGTTTCTGGCTTGGCTGCCTTGCTTAAGGCTGCACACCCTGGATGGAGTCCAGCAGCTATAAAATCAGCCCTAATGACTACAGCTTATACTTTAGACAACCGGGGCGAGACGATGTTAGATGAATCTTCAGGGAATACTTCCACTGTCTTAGACTTTGGAGCTGGTCATGTTCACCCACAGAAGGCAATGGATCCTGGTTTAATCTATGACATGAACACATATGATTATGTTGACTTCTTGTGTAATTCAAACTACACCACGAAGAATATCCAAGTAATTACGGGGAAGATTGCAGATTGTAGTGGAGCAAAAAGGGCTGGCCATACTGGAAACTTGAATTACCCTTCATTGGCTGTGGTGTTTCAACAATATGGTAAGCATAAGATGTCTACACATTTCATAAGAACTGTAACCAACGTTGGGGATGCCAATTCAATCTATAAGGTAACAATAAAGCCACCAAGTGGAATTTCAGTGACAGTTGAGCCAGAAAGGCTGGCGTTTAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTCCAAGCAATGGCTGCTAGACTTTCCTCTGGAAGTTCTAGCATGAAGAGTGGTTCTATAGTTTGGACTGATGGAAAGCATGTAGTCACAAGTCCTTTGGTTGTGACCATGCAGCAACCTCTCCAGTAG 2298 48.65 MASLPFSLLIFFLLLPLSSSKQTFIVQIHSHESKPSIFPTHKHWYESSLSQATIIHTYQTLFHGFSAKLSPSELENLQALPHIASIIPEQVRHLHTTRSPEFLGLKTTDSAGLLKESDFGSDLVIGVIDTGIWPERSSFNDKDLGPIPSKWKGQCVAAKDFPATSCNRKLIGARFFSNGFEATNGKMNETTEFRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWSAGCYDSDILAAFDAAVADGVDVVSLSVGGVVVPYYLDAIAIGAFRAVASGVFVSASAGNGGPGGLTVTNIAPWVTTVGAGTMDRDFPADVQLGNGRVVLGTSVYAGPGLVPGRLYPLIYAGTEGGNGYSSSLCLEGSLDSNLVGGKIVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATSVGATAGDEIRKYIAEAVKSPSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDRIGPSGIPTDKRTTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDMNTYDYVDFLCNSNYTTKNIQVITGKIADCSGAKRAGHTGNLNYPSLAVVFQQYGKHKMSTHFIRTVTNVGDANSIYKVTIKPPSGISVTVEPERLAFRRVGQKLSFLVRVQAMAARLSSGSSSMKSGSIVWTDGKHVVTSPLVVTMQQPLQ 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40408908 40411987 - Sed0005700.1 Sed09g1717 726481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed09g1717 765 ProSiteProfiles Serine proteases, subtilase domain profile. 99 606 - -
Sed09g1717 765 FunFam Subtilisin-like protease SBT1.5 122 341 - -
Sed09g1717 765 PRINTS Subtilisin serine protease family (S8) signature 120 139 IPR015500 -
Sed09g1717 765 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Sed09g1717 765 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Sed09g1717 765 Pfam PA domain 360 449 IPR003137 -
Sed09g1717 765 FunFam Subtilisin-like protease SBT1.5 623 761 - -
Sed09g1717 765 Gene3D - 328 475 - -
Sed09g1717 765 Pfam Subtilase family 120 587 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed09g1717 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 756 IPR045051 -
Sed09g1717 765 CDD PA_subtilisin_like 334 467 - -
Sed09g1717 765 CDD Peptidases_S8_3 93 572 IPR034197 -
Sed09g1717 765 Pfam Fibronectin type-III domain 654 758 IPR041469 -
Sed09g1717 765 Gene3D Peptidase S8/S53 domain 122 619 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed09g1717 765 FunFam subtilisin-like protease SBT1.5 328 474 - -
Sed09g1717 765 Pfam Peptidase inhibitor I9 23 95 IPR010259 -
Sed09g1717 765 Gene3D - 623 761 - -
Sed09g1717 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Sed09g1717 765 SUPERFAMILY Subtilisin-like 94 610 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed09g1717 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 95 IPR037045 -
Sed09g1717 765 SUPERFAMILY Protease propeptides/inhibitors 23 94 - -
Sed09g1717 765 FunFam Subtilisin-like protease SBT1.9 16 95 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g4260 Sed-Chr1:70893589 Sed09g1717 Sed-Chr9:40408908 4.50E-185 dispersed
Sed09g1717 Sed-Chr9:40408908 Sed10g0690 Sed-Chr10:4821375 1.00E-205 dispersed
Sed01g0207 Sed-Chr1:1663281 Sed09g1717 Sed-Chr9:40408908 2.30E-242 transposed
Sed04g2379 Sed-Chr4:37174613 Sed09g1717 Sed-Chr9:40408908 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed09g1717 - - - 0.0