Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0032 ATGGGTATTATTCACCGTGTAAGTTTACTTTGTGTTGTTGTCTGTTTTGGGATGTTTCAATGCTCATCTTGTCTGGATGGATTTGGAGATTCAACAGCTGTGTACATTGTAACTCTCAAGGAACCTCCTTCTACTACTCATTATTATGGTCAGCTTAGACAGAATACTACTTCTCTTAGGTTTGGTACTTCTGGTGGATTAAGCATCCACAACCCAAGAAACATATCAAGAAAACATCCCAGATATAGGTCTTACATAGCCCAAGTTCATGATTCATTGTTGGAGAGGGTCTTGCAGGGGGAGAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAATAAACTTTCAAAGAGGCGAGAGGTGGCAAATGTTGTTATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCGCAGTTCTTGGGCTTGCCGCAGGGAGCTTGGTCTCAAGATGGTGGCTATGAATCTGCTGGAGCTGGGGTTGTGATAGGGTTCATTGACACTGGCATTAACCCTACGCACCCCAGCTTTGTAGATGATTTAACTGATAATCAGTTTCCTATTCCTGCTCACTTTTCGGGAATCTGCGAGGTAACTCCAGATTTTCCTTCTGGATCATGCAATCGGAAGCTCGTAGGAGCGCGTCATTTTGCAGCATCAGCTATAACTAGGGGAATATTTAATGCATCTCAGGATTATGCATCACCATTTGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCACGGCATTCCAGTGCTAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCGAGATGGGGTGGATATAATAAGTTTATCGATCACACCGAACAGGCGCCCCCCTGGCATTGCAACGTTTTTTAATCCCATAGACATGGCATTGCTTTCTGCAGTGAAGTCCGGTATATTTGTTGTGCAAGCAGCTGGTAATACTGGACCAGCACCAAGGAGCATGTCTTCCTTCAGTCCATGGATTTTTACTGTTGGAGCCACTTCTCATGATAGAAGCTATGCTAACTCTATAAGCCTTGGCAATAATGTCACCATCCCAGGAGTCGGGCTTGCACCTGGAACTTATAATGACACGAAGTACAAACTAATTGCTGCAATACATGCATTGAACAATGGCACACGCATTTCGGAGGACTTGTATGTGGGTGAATGCCAAGACTCTAGTAACTTTGATCGGGATCTGATCAAAGGGAACCTTCTAATATGCAGCTACTCGATCAGATTCGTGCTCGGGCTTTCTACTGTTAGAGAGGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATATTCTATATGGATTCTTTTGTGGTCGGTTTTCGGCTTAACCCAATTCCAATGAAAATGCCAGGCATCATAATTTCATCACCAGAAGATTCCAAGATCTTTCTTCAATACTACAATTCTTCTTTGAAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCTAGGATATCTGGAGGATTAAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGCATTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGACTCTGATATTTTGAAGCCCAACTTGGTAGCTCCTGGAAATTTCATATGGGCTGCTTGGAGCTCTCTTGCCACTGACTCTGTCGAATTTCTCGGTGAAAACTTTGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTCATAAAGCAGAAGTACCCGAGTCTTGGTCCTTCAGGCATTGCATCTGCACTATCAACAACTGCGTCTCTTTACGACAAGACTGGTGGACCCATCATGGCTCAGCGTGCTTATGCTAACCCCGAACAGAACAAGTCTCCAGCTACGCCGTTTGATATGGGAAGTGGTTTTGTGAATGCCACTGGAGCTCTCAATCCAGGGTTGATCTTCGACTCCAGTTACAATGATTATATGTCGTTTCTTTGCGGTATCGGCAGATCGGCACCTGTGGTCTTCAACTACACAGGCCAGAACTGCAGGCTGTACAATTCTAGCATCAGTGGAGCTGATTTGAACCTGCCCTCTGTCACAATTGCAAAACTTAACAAATCGAGAATAGTGAAACGAACTGTGACCAACATTGCTGGACCTGAGTTTTATAATGTTGTTTGGAGTGCTCCTTATGGGATATCTTTGAAGGTTACTCCGACTCAATTTAGAATCGGCAGTGGCGAAAAGCAAGAGCTAACGATATTCATCAACGCGACGGTGAACAGCTCGATTGCTAGCTTTGGTAAAATTGGACTTTCTGGGAGTGCAGGCCATATCATCAGCATTCCTGTTTCAGTAATTTTAAAGATCTCATATGACAAAACTACTAATTGA 2535 43.91 MGIIHRVSLLCVVVCFGMFQCSSCLDGFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSLRFGTSGGLSIHNPRNISRKHPRYRSYIAQVHDSLLERVLQGEKYLKLYSYHFLINGFAVLVTEEQANKLSKRREVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGYESAGAGVVIGFIDTGINPTHPSFVDDLTDNQFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAARDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKSGIFVVQAAGNTGPAPRSMSSFSPWIFTVGATSHDRSYANSISLGNNVTIPGVGLAPGTYNDTKYKLIAAIHALNNGTRISEDLYVGECQDSSNFDRDLIKGNLLICSYSIRFVLGLSTVREALQTAKNLSAAGVIFYMDSFVVGFRLNPIPMKMPGIIISSPEDSKIFLQYYNSSLKVDGLTKKISKFGAVARISGGLKANYSSSAPQIMHYSARGPDPEDSSLDDSDILKPNLVAPGNFIWAAWSSLATDSVEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLGPSGIASALSTTASLYDKTGGPIMAQRAYANPEQNKSPATPFDMGSGFVNATGALNPGLIFDSSYNDYMSFLCGIGRSAPVVFNYTGQNCRLYNSSISGADLNLPSVTIAKLNKSRIVKRTVTNIAGPEFYNVVWSAPYGISLKVTPTQFRIGSGEKQELTIFINATVNSSIASFGKIGLSGSAGHIISIPVSVILKISYDKTTN 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 202123 210356 - Sed0006479.1 Sed10g0032 726536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0032 844 CDD Peptidases_S8_3 146 653 IPR034197 -
Sed10g0032 844 CDD PA_subtilisin_like 392 527 - -
Sed10g0032 844 Gene3D - 711 835 - -
Sed10g0032 844 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 95 799 IPR045051 -
Sed10g0032 844 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Sed10g0032 844 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Sed10g0032 844 Gene3D - 386 554 - -
Sed10g0032 844 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 144 IPR037045 -
Sed10g0032 844 Pfam Peptidase inhibitor I9 34 145 IPR010259 -
Sed10g0032 844 Pfam Subtilase family 171 664 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed10g0032 844 Pfam Fibronectin type-III domain 740 833 IPR041469 -
Sed10g0032 844 Gene3D Peptidase S8/S53 domain 173 707 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g0032 844 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Sed10g0032 844 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Sed10g0032 844 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Sed10g0032 844 SUPERFAMILY Subtilisin-like 146 698 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g0032 844 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0032 Sed-Chr10:202123 Sed11g0573 Sed-Chr11:6269540 2.30E-187 dispersed
Sed10g0032 Sed-Chr10:202123 Sed14g1662 Sed-Chr14:24747031 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0032 - - - 0.0