Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed10g0032 | ATGGGTATTATTCACCGTGTAAGTTTACTTTGTGTTGTTGTCTGTTTTGGGATGTTTCAATGCTCATCTTGTCTGGATGGATTTGGAGATTCAACAGCTGTGTACATTGTAACTCTCAAGGAACCTCCTTCTACTACTCATTATTATGGTCAGCTTAGACAGAATACTACTTCTCTTAGGTTTGGTACTTCTGGTGGATTAAGCATCCACAACCCAAGAAACATATCAAGAAAACATCCCAGATATAGGTCTTACATAGCCCAAGTTCATGATTCATTGTTGGAGAGGGTCTTGCAGGGGGAGAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAATAAACTTTCAAAGAGGCGAGAGGTGGCAAATGTTGTTATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCGCAGTTCTTGGGCTTGCCGCAGGGAGCTTGGTCTCAAGATGGTGGCTATGAATCTGCTGGAGCTGGGGTTGTGATAGGGTTCATTGACACTGGCATTAACCCTACGCACCCCAGCTTTGTAGATGATTTAACTGATAATCAGTTTCCTATTCCTGCTCACTTTTCGGGAATCTGCGAGGTAACTCCAGATTTTCCTTCTGGATCATGCAATCGGAAGCTCGTAGGAGCGCGTCATTTTGCAGCATCAGCTATAACTAGGGGAATATTTAATGCATCTCAGGATTATGCATCACCATTTGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCACGGCATTCCAGTGCTAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCGAGATGGGGTGGATATAATAAGTTTATCGATCACACCGAACAGGCGCCCCCCTGGCATTGCAACGTTTTTTAATCCCATAGACATGGCATTGCTTTCTGCAGTGAAGTCCGGTATATTTGTTGTGCAAGCAGCTGGTAATACTGGACCAGCACCAAGGAGCATGTCTTCCTTCAGTCCATGGATTTTTACTGTTGGAGCCACTTCTCATGATAGAAGCTATGCTAACTCTATAAGCCTTGGCAATAATGTCACCATCCCAGGAGTCGGGCTTGCACCTGGAACTTATAATGACACGAAGTACAAACTAATTGCTGCAATACATGCATTGAACAATGGCACACGCATTTCGGAGGACTTGTATGTGGGTGAATGCCAAGACTCTAGTAACTTTGATCGGGATCTGATCAAAGGGAACCTTCTAATATGCAGCTACTCGATCAGATTCGTGCTCGGGCTTTCTACTGTTAGAGAGGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATATTCTATATGGATTCTTTTGTGGTCGGTTTTCGGCTTAACCCAATTCCAATGAAAATGCCAGGCATCATAATTTCATCACCAGAAGATTCCAAGATCTTTCTTCAATACTACAATTCTTCTTTGAAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCTAGGATATCTGGAGGATTAAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGCATTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGACTCTGATATTTTGAAGCCCAACTTGGTAGCTCCTGGAAATTTCATATGGGCTGCTTGGAGCTCTCTTGCCACTGACTCTGTCGAATTTCTCGGTGAAAACTTTGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTCATAAAGCAGAAGTACCCGAGTCTTGGTCCTTCAGGCATTGCATCTGCACTATCAACAACTGCGTCTCTTTACGACAAGACTGGTGGACCCATCATGGCTCAGCGTGCTTATGCTAACCCCGAACAGAACAAGTCTCCAGCTACGCCGTTTGATATGGGAAGTGGTTTTGTGAATGCCACTGGAGCTCTCAATCCAGGGTTGATCTTCGACTCCAGTTACAATGATTATATGTCGTTTCTTTGCGGTATCGGCAGATCGGCACCTGTGGTCTTCAACTACACAGGCCAGAACTGCAGGCTGTACAATTCTAGCATCAGTGGAGCTGATTTGAACCTGCCCTCTGTCACAATTGCAAAACTTAACAAATCGAGAATAGTGAAACGAACTGTGACCAACATTGCTGGACCTGAGTTTTATAATGTTGTTTGGAGTGCTCCTTATGGGATATCTTTGAAGGTTACTCCGACTCAATTTAGAATCGGCAGTGGCGAAAAGCAAGAGCTAACGATATTCATCAACGCGACGGTGAACAGCTCGATTGCTAGCTTTGGTAAAATTGGACTTTCTGGGAGTGCAGGCCATATCATCAGCATTCCTGTTTCAGTAATTTTAAAGATCTCATATGACAAAACTACTAATTGA | 2535 | 43.91 | MGIIHRVSLLCVVVCFGMFQCSSCLDGFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSLRFGTSGGLSIHNPRNISRKHPRYRSYIAQVHDSLLERVLQGEKYLKLYSYHFLINGFAVLVTEEQANKLSKRREVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGYESAGAGVVIGFIDTGINPTHPSFVDDLTDNQFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAARDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKSGIFVVQAAGNTGPAPRSMSSFSPWIFTVGATSHDRSYANSISLGNNVTIPGVGLAPGTYNDTKYKLIAAIHALNNGTRISEDLYVGECQDSSNFDRDLIKGNLLICSYSIRFVLGLSTVREALQTAKNLSAAGVIFYMDSFVVGFRLNPIPMKMPGIIISSPEDSKIFLQYYNSSLKVDGLTKKISKFGAVARISGGLKANYSSSAPQIMHYSARGPDPEDSSLDDSDILKPNLVAPGNFIWAAWSSLATDSVEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLGPSGIASALSTTASLYDKTGGPIMAQRAYANPEQNKSPATPFDMGSGFVNATGALNPGLIFDSSYNDYMSFLCGIGRSAPVVFNYTGQNCRLYNSSISGADLNLPSVTIAKLNKSRIVKRTVTNIAGPEFYNVVWSAPYGISLKVTPTQFRIGSGEKQELTIFINATVNSSIASFGKIGLSGSAGHIISIPVSVILKISYDKTTN | 844 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 202123 | 210356 | - | Sed0006479.1 | Sed10g0032 | 726536 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed10g0032 | 844 | CDD | Peptidases_S8_3 | 146 | 653 | IPR034197 | - | |
Sed10g0032 | 844 | CDD | PA_subtilisin_like | 392 | 527 | - | - | |
Sed10g0032 | 844 | Gene3D | - | 711 | 835 | - | - | |
Sed10g0032 | 844 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 95 | 799 | IPR045051 | - | |
Sed10g0032 | 844 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 617 | 627 | IPR023828 | - | |
Sed10g0032 | 844 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 151 | 694 | - | - | |
Sed10g0032 | 844 | Gene3D | - | 386 | 554 | - | - | |
Sed10g0032 | 844 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 26 | 144 | IPR037045 | - | |
Sed10g0032 | 844 | Pfam | Peptidase inhibitor I9 | 34 | 145 | IPR010259 | - | |
Sed10g0032 | 844 | Pfam | Subtilase family | 171 | 664 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed10g0032 | 844 | Pfam | Fibronectin type-III domain | 740 | 833 | IPR041469 | - | |
Sed10g0032 | 844 | Gene3D | Peptidase S8/S53 domain | 173 | 707 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed10g0032 | 844 | PRINTS | Subtilisin serine protease family (S8) signature | 616 | 632 | IPR015500 | - | |
Sed10g0032 | 844 | PRINTS | Subtilisin serine protease family (S8) signature | 251 | 264 | IPR015500 | - | |
Sed10g0032 | 844 | PRINTS | Subtilisin serine protease family (S8) signature | 171 | 190 | IPR015500 | - | |
Sed10g0032 | 844 | SUPERFAMILY | Subtilisin-like | 146 | 698 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed10g0032 | 844 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 176 | 187 | IPR023827 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed10g0032 | Sed-Chr10:202123 | Sed11g0573 | Sed-Chr11:6269540 | 2.30E-187 | dispersed | |
Sed10g0032 | Sed-Chr10:202123 | Sed14g1662 | Sed-Chr14:24747031 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed10g0032 | - | - | - | 0.0 |