Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed10g0142 | ATGGCTTCCCTTCTCGCTCTCCTTTCGCCGCTCCTTCCGTTCCTGGCCTCCGCCGTGTTCCTCATCATCTTCCTCGAGCAGATCTCCTACTTGAAGAAGAAACGCTCCGTTCCGGGCCCGCCTCTCGTCCTCCCCTTCGTCGGCAACTGCGTTCCTCTGGTTCGAAACCCTGCCAGATTCTGGGAAATCCAAGCTTCCATGGCCAAATCCTCCGGCTACGGCTTCTCCGTCAACTACATTGCCGGCAACTTCATCGTCTTCATCCGCGACACCGAGCTCTCTCACAAGATCTTCGCCAATGTACGTTCCGACGCCATGAATCTCGTCGGCCATCCCTTCGGTAAGAAGCTGTTCGGCGAGGATAATCTGATTTACATGTTAGGTCAAAAGCATAAGGATCTCCGCCGCCGGATCGCTCCTAATTTCACGCCGAAAGCGCTCTGCACCTACACCGCGCTTCAGCAGATCATCATTCTCAAGCACTTGAAGCTTTGGGTACAGAAATCGAAGGAATCGTCGCCGAATCCGATTCCGTTGAGGTTTCTCGCTCGAGATCTGAACCTTGAAGCCTCGCAGATGGTGTTCGTTGGACCGCATTTAGGCGAAGAGATTCGAGAGAAGTTCAGAATCGATTACAACTTGTTCAACGTCGGATTGATGAAGCTTCCGATAGATCTGCCTGGAACTGGTTTCAGAAACGCGCGGCTCGCCGTCGATCGGCTGGTGGAGGTTCTCTCCGACTGCGCGGCGAAGAGCAAGGCGAAGATGAACAGAGAAGAGGAGCCGTCGTGTTTGATTGATTTCTGGATGCAGGACACCGTGAAGGAACTCGCCGACGCGGCGGCGGCCGGGTTGGCGGAGCCGGTCCACACCTCCAACTTCGAGCTCGGACTGTACCTCTTCGATTTCCTCTTCGCCGCTCAAGACGCTTCAACTTCGTCGCTGCTATGGGCGGTGAGTCTCCTCGATTTTCACCCCGAAGTCGTCGGAAAAGTCCGTGAAGAAGTCGAATCGATCTGGTCGCCGGAATCCGACGCACTGATCTCATCGGAGCAGCTTCTGGAAATGAAGTACACTCAGGCGGTGGCGCGTGAGGTCGTTAGGCACCGCGCGCCGGCGACGGTGGTGCCGCACGTGGCGGCGGCGGATTTCCCGTTGACTGATTCATACAAAATCCCCAAAGGAGCCATCGTGTTCCCATCCGCGTACGAGTCGTGCCAGCAAGGGTTCGTCGAACCGGAGCGGTTCGACCCGGATCGGTTCTCGGAGGACCGGCAGGAGGACCGGTTTTTCAAAAGGAACTTTCTGGCTTTCGGGGCTGGGTCCCACCAGTGTGTAGGGCAGCGCTACGCATTGAACCAACTGGTGCTTTTCATCGCAATGTTTTGTACGTTGCTTGATTTCCAGAGGCACAGATCGGACGGCTGCGATGAAATCGCCTTTAATCCAACCATCTGTCCCAAAGATGATTGCATGGTCTCTATCTGTAGCCGTTGCTCTCGATTTCCCAATCTCTCGGTTCAATAA | 1527 | 55.34 | MASLLALLSPLLPFLASAVFLIIFLEQISYLKKKRSVPGPPLVLPFVGNCVPLVRNPARFWEIQASMAKSSGYGFSVNYIAGNFIVFIRDTELSHKIFANVRSDAMNLVGHPFGKKLFGEDNLIYMLGQKHKDLRRRIAPNFTPKALCTYTALQQIIILKHLKLWVQKSKESSPNPIPLRFLARDLNLEASQMVFVGPHLGEEIREKFRIDYNLFNVGLMKLPIDLPGTGFRNARLAVDRLVEVLSDCAAKSKAKMNREEEPSCLIDFWMQDTVKELADAAAAGLAEPVHTSNFELGLYLFDFLFAAQDASTSSLLWAVSLLDFHPEVVGKVREEVESIWSPESDALISSEQLLEMKYTQAVAREVVRHRAPATVVPHVAAADFPLTDSYKIPKGAIVFPSAYESCQQGFVEPERFDPDRFSEDRQEDRFFKRNFLAFGAGSHQCVGQRYALNQLVLFIAMFCTLLDFQRHRSDGCDEIAFNPTICPKDDCMVSICSRCSRFPNLSVQ | 508 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 906840 | 908872 | + | Sed0018301.1 | Sed10g0142 | 726646 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed10g0142 | 508 | Gene3D | Cytochrome P450 | 28 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed10g0142 | 508 | Pfam | Cytochrome P450 | 38 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed10g0142 | 508 | FunFam | Cytochrome P450 61 | 27 | 498 | - | - | |
Sed10g0142 | 508 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed10g0142 | 508 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed10g0142 | 508 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed10g0142 | 508 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed10g0142 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Sed10g0142 | 508 | CDD | CYP61_CYP710 | 74 | 491 | - | - | |
Sed10g0142 | 508 | PANTHER | CYTOCHROME P450 26 | 38 | 464 | - | GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Sed10g0142 | 508 | SUPERFAMILY | Cytochrome P450 | 30 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed10g0142 | Sed-Chr10:906840 | Sed13g1743 | Sed-Chr13:22400999 | 3.50E-13 | dispersed | |
Sed10g0142 | Sed-Chr10:906840 | Sed13g1742 | Sed-Chr13:22400999 | 2.60E-16 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed10g0142 | K09832 | - | csv:101221194 | 879.011 |