Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0192 ATGCATGTGATTATTTTATTATTAAAATTAGGTGTGTGGCCAAAATCCAAGAGCTTTAGTGATGAAGGGATGGGACCCATACCAAAATCATGGAAGGGAATCTGCCAAACAGGACCTGGTTTTGAATCAGCTCATTGCAATAGGAAGATAATTGGAGCAAGATATTACATAAAGGGATATGAGCATCACTTCGGCCGTTTAAATGAAACAATAGACTTCCGATCACCGTGCGACAAGGATGGCCACGGATCACACACCGCCTCCACAGCCGGTGGCCGGAGGGTCCACAACGTCTCGGCCTTCGGTGGCGTCGCTCGGGGCACAGCCTCCGGTGGCGCACCAATGGCCCGGCTGGCAATATACAAAGTTTGTTGGGCAATTCCCAACCAAATGAAAATTCTTGGAAACGTTTGCTTCGACACGGACATGTTGGCCGCCATGGACGACGCCATTGCGGACGGCGTCCACGTTCTTAGCCTCTCCATCGGAAAATCGGACCCGTATAACTATACGGATGACGGGATTGCCATCGGAGCCCTTCACGCGGTTAAACGGGACATTGTGGTGTCTTGTAGCGCTGGGAATTATGGGCCGACCCCGTCGGCGTTGTCGAATGTTGCACCGTGGATTATTACCGTTGGAGCCAGCACTGTGGATCGTGAGTTTTACTCACCTGTCATCCTTGGAAATGGCTTAAAGATTAAGGGATTGTCGGTTGCTCCATCGAAGTTGAAGAAGAAGAAGAAGATGTACCCATTAGTGTATGCTGTAGATATTCAAAAGCCACATGTACCCCGCAACGAGTCCGGACTATGTGTTGCAGGATCGCTTTCACACGAGAAAACCAAAGGGAAAATAGTGCTATGTTATAGAGGAGAAGGAATCAGCAGATACGCCGGCAGCTTGGAAGTGAAAAGGTCCGGTGGCGCCGGAATGATACTCGGGAACGTGCCAGCAGTGGGACGGAGGCCTCACGCCGATCCCCATTTCGTTCCGGCCACCGCGGTGTCTTACGAAGATGCAAATTTGATCCTCAAATACATTATGTCTCACAAAAAACCAACTGCGACTATTGTTCCACCCATCACCATCTATGGCTCCAGGCCAGCCCCCGCCATGGCCAACTTCTCGAGTAGAGGTCCGAACCTCATCGACCCGCATTTTATCAAGCCAGACATAACAGCACCAGGAGTTGACATACTAGCTGCATGGTCAGAACAAGATTCCCCAACCAAACTCCCTAAATCCCTAGACTCTCGCATTGTCAAATTCAATCTCTACTCGGGCACTTCCATGTCCTGTCCCCACGTCGCGGCCGCCGCGGCTCTCCTCCGCTCCATCCACCCCTCCTGGTCCCAAGCCGCGATCCGCTCCGCCCTCATGACCACCTCTACCACCAACAACAAACGCGGTCAACCCATCACCGACAACTCCTCCCCGGACTCTTTATCCCATGCCACCCCTTTCTCCTTTGGCTCGGGCCACTTCCGCCCCTCCCATGCTGTCGACCCCGGCCTTGTATACGATGCCAACTACACCGACTATCTCCATTACCTTTGCGCCCTCAACATGAACTCCATCGACCCCTCCTTCAAGTGCCCTCCACGTGCACGCCATCCTCACGACCTTAACTACCCTTCCATCGCCGTCCCAAAGCTTAGAGGCGCTGTGAGGATCGAACGAATGGTGACCAACGTCGGCGGCGGAGGGAAGAGTGTGTACTTTTTTTACAGTCGGGCGCCGCCGGGTGTGGCGGTTAGGGCTTCTCCTAATGTGTTGTACTTTGATGGAATTGGGGAGAGGAAAATGTTTAGTATTATAGTGAGTGGGAAAGTGAAGGGTAAGGTTGATGCAAGTGGTTATGCTTTTGGTTGGTTTGCTTGGAGTGATGGGATTCACTATGTTAGAAGCCCAATTGCTATCTCTTCAACTTAA 1935 51.83 MHVIILLLKLGVWPKSKSFSDEGMGPIPKSWKGICQTGPGFESAHCNRKIIGARYYIKGYEHHFGRLNETIDFRSPCDKDGHGSHTASTAGGRRVHNVSAFGGVARGTASGGAPMARLAIYKVCWAIPNQMKILGNVCFDTDMLAAMDDAIADGVHVLSLSIGKSDPYNYTDDGIAIGALHAVKRDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLKKKKKMYPLVYAVDIQKPHVPRNESGLCVAGSLSHEKTKGKIVLCYRGEGISRYAGSLEVKRSGGAGMILGNVPAVGRRPHADPHFVPATAVSYEDANLILKYIMSHKKPTATIVPPITIYGSRPAPAMANFSSRGPNLIDPHFIKPDITAPGVDILAAWSEQDSPTKLPKSLDSRIVKFNLYSGTSMSCPHVAAAAALLRSIHPSWSQAAIRSALMTTSTTNNKRGQPITDNSSPDSLSHATPFSFGSGHFRPSHAVDPGLVYDANYTDYLHYLCALNMNSIDPSFKCPPRARHPHDLNYPSIAVPKLRGAVRIERMVTNVGGGGKSVYFFYSRAPPGVAVRASPNVLYFDGIGERKMFSIIVSGKVKGKVDASGYAFGWFAWSDGIHYVRSPIAISST 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1117318 1124647 - Sed0024540.2 Sed10g0192 726696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0192 644 ProSiteProfiles Serine proteases, subtilase domain profile. 1 502 - -
Sed10g0192 644 CDD PA_subtilisin_like 226 358 - -
Sed10g0192 644 Gene3D - 519 644 - -
Sed10g0192 644 Gene3D Peptidase S8/S53 domain 3 515 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g0192 644 ProSitePatterns Serine proteases, subtilase family, serine active site. 429 439 IPR023828 -
Sed10g0192 644 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 639 IPR045051 -
Sed10g0192 644 SUPERFAMILY Subtilisin-like 10 506 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g0192 644 CDD Peptidases_S8_3 3 465 IPR034197 -
Sed10g0192 644 MobiDBLite consensus disorder prediction 462 483 - -
Sed10g0192 644 PRINTS Subtilisin serine protease family (S8) signature 78 91 IPR015500 -
Sed10g0192 644 PRINTS Subtilisin serine protease family (S8) signature 428 444 IPR015500 -
Sed10g0192 644 FunFam subtilisin-like protease SBT1.5 219 365 - -
Sed10g0192 644 Pfam PA domain 251 343 IPR003137 -
Sed10g0192 644 Pfam Subtilase family 60 475 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed10g0192 644 Pfam Fibronectin type-III domain 542 641 IPR041469 -
Sed10g0192 644 Gene3D - 219 365 - -
Sed10g0192 644 FunFam Subtilisin-like protease SBT1.5 2 231 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0192 Sed-Chr10:1117318 Sed10g0690 Sed-Chr10:4821375 1.30E-140 dispersed
Sed10g0191 Sed-Chr10:1117318 Sed10g0192 Sed-Chr10:1117318 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0192 - - - 0.0