Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0264 ATGGGTTCTGGAGATTGGTTTAAGACAGTAATTCGCTTAAAGAAAGTAAAAACCAGCAGTTCGAAACATGCCAAGGAGAAATCAAATAAAGATTCCTTGAAGTTGAAAAATGGTGGTACTAATGGGAGCAGCAAGTCTCTTGGGATGCCAATTGAAGATGTAGCTGCAGTTCGGATTCAAACAGCATATCGAGCATATCGTGCCAGGAAAAATTTACATCGCTTGAAAGGAGCTGTGAGACTGCAGAATCTGACTCAAGGCTATTCTTTTAGAAAGCATGCTACATCTTCGTTAGGTTATCTGCATGCGTGGAGCAAAATACAGGCTCAAATTAGGGCTCGGCGAATTTGTATGGTGACAGAAGGAAGACTAAGACAAAAGAAATTGGAGAATCAACGAAAACTTGAGGCTAAGCTTCATGATATAGAGGTGGAGTGGTGTGGCGGTGCCGACACGATGGAGGAGATTCTTTCACGGATACACGAGAGAGAAGAAGCCGCTGTTAAGCGTGAGCGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAGTGAAGTGTATGGCTTGGGTAAAGATGAACTTGGCAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATTGCTGCTCGTCCATGGGAAAGCCGTGTACCGTCTCAGTTTGTTAGTCCGAAGAAATCGATAACTAGACAATCAAGCAAGGGCAGTAAGAAAAACTCACCATCTCCGAAAACCCGAGTTTTCGTCAAACCTCCTTCTCCAAATGGGAAATCAACACCAAAGCCTCGGAGGTTGTCTTATCCAGCAACCGAGAAAACAGAAAAACCGGCTACAGAAGAGAAGGTCATCAAGAAAAATGTTAAAGATGATGAAGGAAACACCAAGAAAGAAGAAACAACTTCTTAA 915 43.5 MGSGDWFKTVIRLKKVKTSSSKHAKEKSNKDSLKLKNGGTNGSSKSLGMPIEDVAAVRIQTAYRAYRARKNLHRLKGAVRLQNLTQGYSFRKHATSSLGYLHAWSKIQAQIRARRICMVTEGRLRQKKLENQRKLEAKLHDIEVEWCGGADTMEEILSRIHEREEAAVKRERAMAYAFSHQWRANSSEVYGLGKDELGKADWGWSWKERWIAARPWESRVPSQFVSPKKSITRQSSKGSKKNSPSPKTRVFVKPPSPNGKSTPKPRRLSYPATEKTEKPATEEKVIKKNVKDDEGNTKKEETTS 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1532884 1537888 - Sed0021915.1 Sed10g0264 726768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0264 304 MobiDBLite consensus disorder prediction 223 246 - -
Sed10g0264 304 Coils Coil 125 145 - -
Sed10g0264 304 ProSiteProfiles IQ motif profile. 52 80 - -
Sed10g0264 304 PANTHER IQ-DOMAIN 5-RELATED 35 269 - -
Sed10g0264 304 MobiDBLite consensus disorder prediction 18 46 - -
Sed10g0264 304 Pfam IQ calmodulin-binding motif 55 72 IPR000048 GO:0005515(InterPro)
Sed10g0264 304 MobiDBLite consensus disorder prediction 270 304 - -
Sed10g0264 304 MobiDBLite consensus disorder prediction 221 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0264 Sed-Chr10:1532884 Sed12g1498 Sed-Chr12:20358581 2.70E-32 dispersed
Sed04g1560 Sed-Chr4:30362242 Sed10g0264 Sed-Chr10:1532884 1.50E-60 transposed
Sed10g0264 Sed-Chr10:1532884 Sed14g1502 Sed-Chr14:23347089 1.60E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0264 - - - 0.0