Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0516 ATGTTGCTGGTTTATTGTTTGTGTTTGTGTTTGTGTTTGTTGTGGGGGAGATCGACGGCGGCTGCGGCCGGCGGCGACGGCACCACCAGGGAGCTTGATCAGACTCCGACGTGGGCTGTTGCCGGTGTTTGTGCTTTGATCATCATTATTTCTATTGCCTTGGAGAAACTCCTTCATAAAGCTGGAACGTGGCTTACGGAAAAGCATAAGAGAGCTCTTTTTGAAGCTCTGGAGAAGGTTAAAGCTGAGCTGATGATTCTGGGATTCATTTCTCTGCTCCTCACCTTTGGGCAGAACTATATCATTAAAATCTGCATTCCAACAAAGGTTGCGAACACTATGTTACCGTGTGCAGCAGCCAAAGAGGGAAAGGACTTGGTTGGAGGCGATGAAAGCGAACATCATCGACGACTTCTATACTACGAACGTAGGTTCCTGGCTGCTGCTAGCCCTGTTAGTTGCAAGGATGGTCATGTGCCGCTTATATCTATCTCAGGATTGCATCAGTTGCACATATTCATCTTTTTCTTAGCCGTATTTCATGTAGTATACAGTGCTATCACAATGATGCTTGGGAGACTAAAGATTCGAGGTTGGAAGGCATGGGAGGAGGAGACCTCAACTCACAATTATGAGTTCTCAAATGATAATGCAAGATTCAGGCTTACTCATGAAACATCATTTGTGAAAGCTCACACGAGCTTTTGGACAAAACTTCCCGTCCTCTTTTATATTGGATGCTTCTTCCGACAATTTTTCAGGTCTGTTGGTAAGGCTGACTACATGACGTTACGCAATGGATTCATCGCTGTTCATCTTGCTCCAGGAAGTAAATTTGACTTTCAAAAATATATTAAAAGGTCCCTAGAAGATGACTTCAAGATAATTGTGGGAGTGAGTCCCGTGCTTTGGGCATCGTTCGTCGTCTTCTTGCTCATAAACGTTCACGGATGGCAGGCATTGTTTTGGACATCCTTAGTCCCTGTTATTATAATCCTAGCTGTTGGAACAAGGCTTCAAGGAGTTATGACAAATATGGCTCTTGAAATTACAGAAAGACATGCTGTTGTCCAAGGAATTCCTCTTGTTCAGGCATCAGATAAATATTTTTGGTTTAACAAGCCTCAGCTGGTTCTTTATCTCATCCACTTCGCTTTATTTTCGAATGCGTTCCAGATAACATACTTCTTCTGGATTTGGTATTCCTTCGGGCTAAAATCCTGTTTCCATACTGATTTGAAGCTTGCAATTATCAAAGTCGGTTTAGGGGTTGGCGTTCTCTGTCTTTGCAGCTACATTACTCTTCCACTGTATGCTCTTGTGACTCAGATGGGAACGCGAATGAAGAAATCGATCTTTGACGAACAAACATCGAAGGCCCTCAAGAAGTGGCACATGGCCGTTAAGAAGCGGCACGGAAAGTCCCCGACTCGAAAACTGGGGAGCACAAATGTTTCACCAAGTGCTTCACCGATGCATTCATCATCTGGATACCACACATTGCATCGTTTCAAGACCACAGGTCACTCAAACAGATCATCCATGTATGAGGAGACCGAGACATCTGATTACGAAGTTGATACGTTGTCGCCTAAAGCACCGGCTGCAAATTTTACGGTTAGAGTAGACCCTCGTGATGAACATCGAGCTGAAGTTCTCGAATCCCAGCATTCGGAAAGACGGAATGAAGACGAATTCTCATTTGCCAAACCTAAACCATGA 1722 44.19 MLLVYCLCLCLCLLWGRSTAAAAGGDGTTRELDQTPTWAVAGVCALIIIISIALEKLLHKAGTWLTEKHKRALFEALEKVKAELMILGFISLLLTFGQNYIIKICIPTKVANTMLPCAAAKEGKDLVGGDESEHHRRLLYYERRFLAAASPVSCKDGHVPLISISGLHQLHIFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEEETSTHNYEFSNDNARFRLTHETSFVKAHTSFWTKLPVLFYIGCFFRQFFRSVGKADYMTLRNGFIAVHLAPGSKFDFQKYIKRSLEDDFKIIVGVSPVLWASFVVFLLINVHGWQALFWTSLVPVIIILAVGTRLQGVMTNMALEITERHAVVQGIPLVQASDKYFWFNKPQLVLYLIHFALFSNAFQITYFFWIWYSFGLKSCFHTDLKLAIIKVGLGVGVLCLCSYITLPLYALVTQMGTRMKKSIFDEQTSKALKKWHMAVKKRHGKSPTRKLGSTNVSPSASPMHSSSGYHTLHRFKTTGHSNRSSMYEETETSDYEVDTLSPKAPAANFTVRVDPRDEHRAEVLESQHSERRNEDEFSFAKPKP 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3360296 3368614 + Sed0012465.1 Sed10g0516 727020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0516 573 MobiDBLite consensus disorder prediction 468 573 - -
Sed10g0516 573 PANTHER MLO-LIKE PROTEIN 1 26 519 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed10g0516 573 Pfam Mlo family 30 504 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed10g0516 573 MobiDBLite consensus disorder prediction 478 517 - -
Sed10g0516 573 MobiDBLite consensus disorder prediction 541 573 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g1045 Sed-Chr4:14441100 Sed10g0516 Sed-Chr10:3360296 9.90E-182 dispersed
Sed07g2279 Sed-Chr7:38645239 Sed10g0516 Sed-Chr10:3360296 8.80E-130 dispersed
Sed08g1856 Sed-Chr8:33186363 Sed10g0516 Sed-Chr10:3360296 9.70E-171 dispersed
Sed09g0123 Sed-Chr9:962428 Sed10g0516 Sed-Chr10:3360296 7.70E-109 dispersed
Sed10g0280 Sed-Chr10:1631594 Sed10g0516 Sed-Chr10:3360296 2.50E-102 dispersed
Sed10g0516 Sed-Chr10:3360296 Sed11g1950 Sed-Chr11:33809596 6.90E-90 dispersed
Sed02g0209 Sed-Chr2:34503770 Sed10g0516 Sed-Chr10:3360296 1.00E-178 transposed
Sed10g0516 Sed-Chr10:3360296 Sed14g1259 Sed-Chr14:21668597 8.50E-274 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0516 K08472 - csv:101212923 986.482