Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0668 ATGGCTCTTCATGATGAACCCCAACTTCACGACACTGAAACCCAATCCCTCTTCTGCCAGGAGCATTTCGATGGAAAAGAAGCCGATGAAGATGGCGAATACTGGGAAACTCTCAGAAAGAACCAGTCTTTTCTCTCGTTGAGTTTAGTGGAAAACGACCCTTTTTGTGAGGACAAGAAATTGCAGTCTCTGATTTCGAAGCAAGACCGAACCCACGTTGGTTGTGCTCTTGCTAGCTCTGATGGGTATCTAATTCAGGCTCGGAACCAGGCATTGTCCTGGATTCTTTATGTTCAACGCCACTACGGTTTCTCTGTTTTGACCTCTGTTCTTGCTGTTAACTACTTTGATAGATTTGTTTCCAATGTGAGGTTGCAGAGAGACAAGCCATGGATGAGTCAGCTTGTTGCAGTTGCTTGCCTCTCTCTGGCTGCCAAGGTGGAGGAGACCCATGTCCCACTTCTCTTGGATTTTCAAGTGGTAGATTCTATGTTTTTATTTGAAGCAAAGACCATCCAAAGAATGGAGCTGCTTGTGTTGTCATCCCTTCAATGGAAGATGCATCCAGTGACCCCCTTTTCCTTCTTTCATCACATTGTCAAGAGGCTGCCTCTGAATGACCATATGCACTGGGAACTTCTTGGGAGGTTTCAGAGTCATCTTCTCTCTATCATTGCTGGTAATATGCTTAAACATCTGCTTATCATGTAA 711 44.73 MALHDEPQLHDTETQSLFCQEHFDGKEADEDGEYWETLRKNQSFLSLSLVENDPFCEDKKLQSLISKQDRTHVGCALASSDGYLIQARNQALSWILYVQRHYGFSVLTSVLAVNYFDRFVSNVRLQRDKPWMSQLVAVACLSLAAKVEETHVPLLLDFQVVDSMFLFEAKTIQRMELLVLSSLQWKMHPVTPFSFFHHIVKRLPLNDHMHWELLGRFQSHLLSIIAGNMLKHLLIM 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4578775 4580686 + Sed0025703.3 Sed10g0668 727172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0668 236 FunFam D6-type cyclin 72 188 - -
Sed10g0668 236 SMART cyclin_7 93 181 IPR013763 -
Sed10g0668 236 Gene3D - 62 222 - -
Sed10g0668 236 PANTHER CYCLINS 85 220 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Sed10g0668 236 Pfam Cyclin, N-terminal domain 85 187 IPR006671 -
Sed10g0668 236 CDD CYCLIN_AtCycD-like_rpt1 87 185 - -
Sed10g0668 236 SUPERFAMILY Cyclin-like 70 188 IPR036915 -
Sed10g0668 236 Gene3D - 74 188 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0666 Sed-Chr10:4578775 Sed10g0668 Sed-Chr10:4578775 4.10E-127 dispersed
Sed10g0668 Sed-Chr10:4578775 Sed14g0876 Sed-Chr14:17592829 1.80E-76 dispersed
Sed10g0667 Sed-Chr10:4578775 Sed10g0668 Sed-Chr10:4578775 7.90E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0668 K14505 - csv:101216655 325.479