Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0673 ATGGGCGATTACTCTCTCCTTTATCTTCTTCTCTCACTCATTTCCATCCTCATCGCTTTCAAGCTCCACCGCCGTCGCCGAAACCTACCGCCGAGTCCGCCGTCTCTTCCGATCATCGGCCACCTCCACTACCTGAAAATCCCCATCCACCGGACCTTCCAGAACCTCTCTGCAAAGTACGGACCAGTAATCTCTCTCTGGTTCGGATCTCGCCTCGTGGTGGTCCTCTCCTCGTCGGCCGCCGTGGACGAGTGCTTCGCCAAAAACGACGTCGTTCTCGCCAACCGCCCCCGGCTGCTACTCGGCAAACACGTCGGCTACAACCACACGACGATGGTAGCGTCGCCGTACGGCGACCACTGGCGCAACCTCCGGCGGATCGGCGCGATCGAGATCTTCTCCGCCTCTCGCCTGAACAAATTCACCGGAATCCGGAGAGACGAAGTGGAGCGGCTACTGAAGAGGCTTTCGAGAAATCACAGCAGCGGATTCGCGAAGGTAAATGTGCAATCGGCGATATCGGAGATGACGTTCAACATCTCGATGAGAATGGCGGCCGGAAAGCGGTATTTCGGGGAGGAGGTGGCGGACGAGGAGGAGGCGAGGGAGATCAGATCGCTGATCAAGCAGACGGTGGCGGCGGGAGGCGTATCGCACCTCGGAGATTACATTCCGGCGATGAACTGGATCCCGAACGGATTCGAGAAGAAGGTTTCGAAGCTTGCGAAGAGGATCGATGCGTTTCTGCAGGGATTGATTGACGAACATCGGAGTTGTGAGGAAGAAGGAAGGAACACCATGATTGATCATTTGCTGTCTCTGCAACAATCGGAGCCTGATTACTATGGAGATCAGATTATCAAAGGAATCGTTCTGGTATTACTCTTAGCAGGAACAGACACATCAGCGGTGACAATAGAATGGGCTCTATCTCAATTGCTCAACAATCCCAACGTACTCAAGAAAGCAAGAGAAGAGATCGACACCGAAATTGGCCAAGACCGACTAGTAGAAGAATCCGACGTACCCAAATTACCCTATCTTCAAGGAATCATCTCCGAGACTCTTCGATTGAACCCAGCAGCTCCAATGTTGTTACCACATTGTACCTCCGACGACTGCACAATCAGCGGTTACGATATACCTCGCAACACAATCGTGTTGGTCAATGCATGGGCCATCCATAGAGATCCCAATCAATGGGAAGACCCCACCCGATTCAACCCGGAACGACATTTAACGTCGGACAAAGGTGGGGTGTGCAGGCTGGTTCCATTTGGTGTTGGACGTCGAGCTTGCCCCGGCTCGGGCATGGCACAACGGGTGGTCGGGTTAGCTCTAGCCGCGTTGATTCAGGGCTATGATTGGGAGAGGGTTGGGAAAGAGGAGGTGGATATGGGTGAGGGAAGTGGAATCACCATGCCCAAGGTTGTGCCACTGGAAGCCATGTGCAAACCTCGGCGTATCTTTTATAATCTTTTTGATTGA 1488 53.43 MGDYSLLYLLLSLISILIAFKLHRRRRNLPPSPPSLPIIGHLHYLKIPIHRTFQNLSAKYGPVISLWFGSRLVVVLSSSAAVDECFAKNDVVLANRPRLLLGKHVGYNHTTMVASPYGDHWRNLRRIGAIEIFSASRLNKFTGIRRDEVERLLKRLSRNHSSGFAKVNVQSAISEMTFNISMRMAAGKRYFGEEVADEEEAREIRSLIKQTVAAGGVSHLGDYIPAMNWIPNGFEKKVSKLAKRIDAFLQGLIDEHRSCEEEGRNTMIDHLLSLQQSEPDYYGDQIIKGIVLVLLLAGTDTSAVTIEWALSQLLNNPNVLKKAREEIDTEIGQDRLVEESDVPKLPYLQGIISETLRLNPAAPMLLPHCTSDDCTISGYDIPRNTIVLVNAWAIHRDPNQWEDPTRFNPERHLTSDKGGVCRLVPFGVGRRACPGSGMAQRVVGLALAALIQGYDWERVGKEEVDMGEGSGITMPKVVPLEAMCKPRRIFYNLFD 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4644986 4647292 - Sed0001498.1 Sed10g0673 727177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0673 495 PANTHER CYTOCHROME P450 82C3-RELATED 15 487 IPR050651 -
Sed10g0673 495 Pfam Cytochrome P450 30 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 Gene3D Cytochrome P450 18 485 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 CDD CYP81 61 480 - -
Sed10g0673 495 SUPERFAMILY Cytochrome P450 30 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed10g0673 495 FunFam Cytochrome P450 family protein 21 490 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g3740 Sed-Chr5:45291773 Sed10g0673 Sed-Chr10:4644986 2.00E-165 dispersed
Sed05g3741 Sed-Chr5:45299043 Sed10g0673 Sed-Chr10:4644986 1.10E-158 dispersed
Sed07g0154 Sed-Chr7:1396864 Sed10g0673 Sed-Chr10:4644986 4.40E-157 dispersed
Sed10g0673 Sed-Chr10:4644986 Sed13g1787 Sed-Chr13:22916394 2.00E-138 dispersed
Sed10g0673 Sed-Chr10:4644986 Sed10g0675 Sed-Chr10:4665286 2.90E-206 proximal
Sed10g0672 Sed-Chr10:4631370 Sed10g0673 Sed-Chr10:4644986 2.50E-39 tandem
Sed10g0673 Sed-Chr10:4644986 Sed10g1215 Sed-Chr10:25360896 1.50E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0673 K13260 - csv:101211829 766.148