Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0690 ATGCTCCAGACAATGGCGAACCTTATTTTGTTTTTTCTTCTTCTCTGTTTCCTCTCTGCGCCGTCCATGGCGGATCCTGAGAAGAAGACGTACATCGTCCATATGGCTAAGTACCAAATGCCTGATAGTTTCGAGCACCACTTGCACTGGTACGATTCCTCCTTGAGATCGGTTTCCGATACGGCGGAGATGATTTATGCTTACAACAACGCCGTCCATGGATTCGCAACCAGATTGACGGCGGAGGAAGCTCGGCGCCTGGAGGCTCAGCCGGGGATTTTGGCGGTGCTGCCGGAGATGAGATATGAACTTCATACCACTCGAACTCCTCAGTTTCTTGGACTTGACAAGAACGCAGATCTGTATCCTGAATCGAATTCTGTCTCGGAGGTGGTGGTTGGAGTTTTGGATACCGGAGTTTGGCCGGAGAGTAAGAGCTTTGACGATACTGGACTTGGACCGGTGCCGAATAGCTGGAAAGGTGAGTGTGAATCTGGCACTAATTTCAGTGCTTCGAACTGTAACAGGAAGCTGATCGGAGCGAGGTATTTCTCCAAGGGTTATGAGGCGACTCTCGGTCCGATCGACGAATCGAAGGAATCCAGATCTCCGAGAGACGACGACGGCCATGGAACCCACACGGCCACCACCGCCGCCGGTTCTGTGGTGGAAAACGCGAGTTTGTTTGGTTACGCCTCCGGCACCGCCCGTGGGATGGCCGCTCGTGCGAGAGTCGCCGCCTATAAGGTCTGTTGGGAGGGCGGATGTTTCAGCTCCGATATCTTGGCCGCCATTGAGAAAGCTGTGGATGATAATGTTAATGTCATTTCCATGTCGCTCGGCGGCGGAATTTCTGACTATTACAAAGACAGCGTCGCCTCTGGAGCTTTCGCCGCCATGGAGAAAGGTATTCTGATCTCTTGCTCCGCCGGTAATGCCGGTCCTAGTCCTTATAGTTTGTCTAATATGTCTCCGTGGATCACCACCGTCGGCGCCGGAACTTTAGATCGGGATTTTCCGGCATATGTCAGTGTCGGCGACGGTAAGAATTTCTCCGGCGTTTCGCTTTATCGTGGTAAGCCATTGGCTGGAACTTTGATGCCGTTTATTTATGCTGCGAATGCGAGTAACTCTGCTAATGGGAATTTGTGTATGGCTGGTACTTTGATCCCGGAAAAAGTTGCCGGGAAAATTGTGTTCTGTGATAGAGGTGTGAACCCTAGGGTTCAGAAAGGGGCGGTGGTGAAAGCCGCCGGTGGGATTGGAATGGTTTTGGCTAACACCGACGCTAACGGCGAAGAGCTGGTGGCGGACTCTCATCTTCTGCCGGCGACGGCGGTGGGACAGAAAGCCGGCAACATTATTCGGAAGTATTTGATTTCGGAGTCGAATCCTACGGTGACGATCTTATTCGAAGGGACGAAATTAGGGATCGAACCGTCGCCGGTGGTGGCAGCGTTTAGTTCCCGTGGACCGAATTCGATCACTCCTCAGTTGCTGAAGCCGGACATAATCGCCCCTGGGGTTAACATTTTAGCCGGATGGTCTAAATCAGTGGCGCCTAGTGGTTTAGCCATTGATGACAGACGGGTCGATTTCAACATCATCTCCGGAACCTCCATGTCTTGCCCTCACGTCAGCGGTCTCGCCGCTCTAATCAAGGGTGTTCATCCCGACTGGAGTCCGGCAGCGATTCGATCAGCATTGATGACTACGGCCTACACAGCCTACAAAAATGGCCAGAAGATCCAAGATATAGCAACTGGAAAACCATCCACCCCATTCGATCACGGTGCTGGACATGTCGATCCGGTATCGGCACTCAATCCGGGTCTTGTTTACGACATTACAGTGGACGATTACCTGAACTTCCTCTGTGCACTCAATTACACTTCCTCCCAGATCAACTCACTGGCAAGGAGAGATTACAGTTGTGATGCTGGGAAGAAGTACAGTGTCAATGATCTTAACTATCCATCTTTCGCTGTCGTCTTCGATGGCGTAGTGGGCGGCGGAAAGGATGGTTCCAATGTTGTCAAGCACACCAGAACTCTTACAAATGTTGGATCTGCAGGAACTTACAAAGTCTCAATCTCGTCGGAGACCAAGCTGGTGAAAATCTCTGTCGAGCCGGAATCTTTAAGCTTCACCGAAGCGAATGAGAAGAAGTCCTACACAGTTACATTCACCACGACGACGGGTGCAGCTGCGCCGTCGAGCGAAGAAGGTTTCGGTCGAATTGAGTGGTCGGATGGGAAGCATGTGGTTGGAAGCCCGATTGCATTTAGTTGGTCGTAG 2298 51.61 MLQTMANLILFFLLLCFLSAPSMADPEKKTYIVHMAKYQMPDSFEHHLHWYDSSLRSVSDTAEMIYAYNNAVHGFATRLTAEEARRLEAQPGILAVLPEMRYELHTTRTPQFLGLDKNADLYPESNSVSEVVVGVLDTGVWPESKSFDDTGLGPVPNSWKGECESGTNFSASNCNRKLIGARYFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWEGGCFSSDILAAIEKAVDDNVNVISMSLGGGISDYYKDSVASGAFAAMEKGILISCSAGNAGPSPYSLSNMSPWITTVGAGTLDRDFPAYVSVGDGKNFSGVSLYRGKPLAGTLMPFIYAANASNSANGNLCMAGTLIPEKVAGKIVFCDRGVNPRVQKGAVVKAAGGIGMVLANTDANGEELVADSHLLPATAVGQKAGNIIRKYLISESNPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQLLKPDIIAPGVNILAGWSKSVAPSGLAIDDRRVDFNIISGTSMSCPHVSGLAALIKGVHPDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTPFDHGAGHVDPVSALNPGLVYDITVDDYLNFLCALNYTSSQINSLARRDYSCDAGKKYSVNDLNYPSFAVVFDGVVGGGKDGSNVVKHTRTLTNVGSAGTYKVSISSETKLVKISVEPESLSFTEANEKKSYTVTFTTTTGAAAPSSEEGFGRIEWSDGKHVVGSPIAFSWS 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4821375 4824392 - Sed0007862.1 Sed10g0690 727194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0690 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 760 IPR045051 -
Sed10g0690 765 Pfam Fibronectin type-III domain 655 761 IPR041469 -
Sed10g0690 765 CDD Peptidases_S8_3 102 574 IPR034197 -
Sed10g0690 765 Gene3D - 336 477 - -
Sed10g0690 765 FunFam Subtilisin-like protease SBT1.9 19 105 - -
Sed10g0690 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Sed10g0690 765 Gene3D - 625 764 - -
Sed10g0690 765 ProSiteProfiles Serine proteases, subtilase domain profile. 101 608 - -
Sed10g0690 765 Pfam Subtilase family 130 578 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed10g0690 765 SUPERFAMILY Subtilisin-like 104 612 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g0690 765 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Sed10g0690 765 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Sed10g0690 765 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Sed10g0690 765 FunFam subtilisin-like protease SBT1.5 336 476 - -
Sed10g0690 765 MobiDBLite consensus disorder prediction 194 217 - -
Sed10g0690 765 MobiDBLite consensus disorder prediction 194 212 - -
Sed10g0690 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 105 IPR037045 -
Sed10g0690 765 FunFam Subtilisin-like protease SBT1.5 130 352 - -
Sed10g0690 765 Gene3D Peptidase S8/S53 domain 131 621 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed10g0690 765 Pfam PA domain 380 454 IPR003137 -
Sed10g0690 765 CDD PA_subtilisin_like 342 469 - -
Sed10g0690 765 Pfam Peptidase inhibitor I9 30 105 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g0922 Sed-Chr8:7816080 Sed10g0690 Sed-Chr10:4821375 1.20E-227 dispersed
Sed09g1653 Sed-Chr9:39951696 Sed10g0690 Sed-Chr10:4821375 2.00E-225 dispersed
Sed09g1717 Sed-Chr9:40408908 Sed10g0690 Sed-Chr10:4821375 1.00E-205 dispersed
Sed10g0191 Sed-Chr10:1117318 Sed10g0690 Sed-Chr10:4821375 4.20E-159 dispersed
Sed10g0192 Sed-Chr10:1117318 Sed10g0690 Sed-Chr10:4821375 1.30E-140 dispersed
Sed10g0690 Sed-Chr10:4821375 Sed12g1704 Sed-Chr12:28243348 5.90E-230 dispersed
Sed13g0205 Sed-Chr13:1331968 Sed10g0690 Sed-Chr10:4821375 4.30E-228 transposed
Sed10g0690 Sed-Chr10:4821375 Sed10g1210 Sed-Chr10:24900007 1.50E-297 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0690 - - - 0.0