Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0903 ATGGTCATTTGGAGAATGCTAACAATGGTGAAATGCTTATTGGTCATAGTTTTCTTGGCCTTCTCGGCCTTTGCACAGGACATCCCTAAACCAAAAGGGAAATGGCTCACTTTGAAAGGGGAAGAGCCATTAGTGATAGCAAGAGGTGGATTTTCAGGATTATTTCCAGAATCAAGTACTTTTGCAAATCAATATGCAATTGGTTATGGTTTACATACCACTGTTTTGTATTGCAACATCCAATTAACCAAAGATGGGGTTGGCATTTGCTTGACTGATCTTAGGCTACAAAACTCAACCAACATTCAAGAAATCTTCCCAAAAGCTCGCCAGGCTTACAAAGTCAACGGAAACCTTGTACGAGGATGGTTTTCTGTTGATTACATGTCTGATGATCTTTTGAGCAGAATCAACTTGGTTCAGAGTACTCTATCCCGGCCTAGTATCTTCGATACTACTCTCCCGATTTCTACTGTTGATGATGTTATGGGATTGAAACCATCCCAACTTTGGTTGAACGTCCAGAATGAGGCATTCTTCAAAGAACACAACCAGAGTGTGGTGGCATACCTTCAGAAGAAAATGAGAATGTTGCGAGTAAACTTCGTGTCGTCGTGCGAGATCGGGATCTTGAAAAGCTTAATTGGGAATGTGAAGAACACCGAAACGAAGCTCGTGTTTAAATTCTTGGAAGATGGTGTGACCGAGCCGACAACGGGAAAAACATACGGGGAACTGGCGAAGGATTTGGCGATGATTAAGTCGTTTGCGTCGGGGATTCTGATCCGAAAAGAAAACATTTGGCCTGTTGGTCCAAATGGGTATATGATGCCTGCAACAACACTTGTGACGGATGCTCATAAGCTTGGCATTGAAGTCTATGCTTCTGGCTTTGCAAATGATGCTCTTGTTGGCTACAATTATAGCTATGATCCTATTCGTGAGTACCTTCAGTTTATTGATAATGGACAGTTTTCTGTTGATGGGTTGCTCACTGATTTCACGGTTACTGCTTCTCAAGCCGTTGCCTGCTATTCTAGCATTCGCGGCCCTGCTCAGCCTGCACAAAAAGACTCGCTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTTTCCGGGCTCAACGGATCTTGCATATCAAGGAGCCATTGATGATGGGGCTGATGTTATTGATTGTTCAGTACAATTGTCAAAAGATGGAGTTCCTTTCTGCATGGACTTGGCTGATCTTATGCCTACTACCACTGTTATCACTACTTTCTCCGATAAAACCACAACTATCCCCGAAATTCAACGCGAACCCGGAATCTTCTCTTTTCAACTTACTTGGCCTGAAATTCTTACTATCAAGCCTCAAACTATTAGCCCTTACTTGTCATCTTCTCAGCTTGCGCGAAATCCTGCCTTTAAGAATAAGGGCAAGTTCATGACACTCCCAGAGTTTCTCGACCTTGCCAAAGCCAAAGCGGTTTCAGGGATTATGATCAACATTCAAAATGCGGCATACCTGGCTTCAAAGCAAGGTCTTGACCTTGTGGGAACTATAATAACAGCGTTAACTAATGCGAGTTTCGAGAAGCAATCGACACAAATGGTTTTCATACGGTCGGATGACACTTCTGTGTTGTCCATTTTCAAGACCAAATTTCCAACTTTAACAAGAGTCTTGACTCTTGATGGCAAGTATGGCTCCATCCCCGAAGCTGCCGTTAAGGAAATTAAAAACATTGCTGAAGTTGTCGCCATTCCTCGCGGGTCGATCCTCGAAATATCGAACTATTTCACCACGAATAGCACCCCGGTCATCGCTGAATTAAAGGTTGCAAATATCTCCGTCTTCGCTTATGTCATGAGGAACGAATACGTCTCCCTTGCCGTCGATTTCTATAGCCAAAGCTCGATGGAGATTTCCACTTATACCGACTACTTCCATGTCGATGGCATCATCACTGAATTCCCTTATACTGCAAAGAAATTCTTAACAAATCCATGTCGACCAAATAGTGAGAACCCGGACCAGAATATATATCCAGTCTTACCAGTTGAAATTGGATCATTGATAAATATGGTGGAGAAAGAAGCTAGACCACCTATCAATCCTCGGTTGCCACCATTGGATGCTGCAACTATCGTCGACCCGCCTCTCCCACCGGTCAGCGAAGTGTCATCGAGCACTGCCACGGCCGCTGACGGGCCTGCCACTGGCTCGCCATCAGCCGCTGTATCAAATGTTGCTAGCTGGTTGCTTTCTCTATTATCAGCTGTTGTGCTCATCTCCATTTCTCACTCTGCACTGTAA 2298 44.21 MVIWRMLTMVKCLLVIVFLAFSAFAQDIPKPKGKWLTLKGEEPLVIARGGFSGLFPESSTFANQYAIGYGLHTTVLYCNIQLTKDGVGICLTDLRLQNSTNIQEIFPKARQAYKVNGNLVRGWFSVDYMSDDLLSRINLVQSTLSRPSIFDTTLPISTVDDVMGLKPSQLWLNVQNEAFFKEHNQSVVAYLQKKMRMLRVNFVSSCEIGILKSLIGNVKNTETKLVFKFLEDGVTEPTTGKTYGELAKDLAMIKSFASGILIRKENIWPVGPNGYMMPATTLVTDAHKLGIEVYASGFANDALVGYNYSYDPIREYLQFIDNGQFSVDGLLTDFTVTASQAVACYSSIRGPAQPAQKDSLVISSNGASGDFPGSTDLAYQGAIDDGADVIDCSVQLSKDGVPFCMDLADLMPTTTVITTFSDKTTTIPEIQREPGIFSFQLTWPEILTIKPQTISPYLSSSQLARNPAFKNKGKFMTLPEFLDLAKAKAVSGIMINIQNAAYLASKQGLDLVGTIITALTNASFEKQSTQMVFIRSDDTSVLSIFKTKFPTLTRVLTLDGKYGSIPEAAVKEIKNIAEVVAIPRGSILEISNYFTTNSTPVIAELKVANISVFAYVMRNEYVSLAVDFYSQSSMEISTYTDYFHVDGIITEFPYTAKKFLTNPCRPNSENPDQNIYPVLPVEIGSLINMVEKEARPPINPRLPPLDAATIVDPPLPPVSEVSSSTATAADGPATGSPSAAVSNVASWLLSLLSAVVLISISHSAL 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6959253 6964349 + Sed0011673.1 Sed10g0903 727407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0903 765 SUPERFAMILY PLC-like phosphodiesterases 360 660 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Sed10g0903 765 SUPERFAMILY PLC-like phosphodiesterases 42 341 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Sed10g0903 765 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 357 660 - -
Sed10g0903 765 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 10 741 - GO:0008889(PANTHER)
Sed10g0903 765 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 342 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Sed10g0903 765 Gene3D Phosphatidylinositol (PI) phosphodiesterase 358 661 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Sed10g0903 765 ProSiteProfiles GP-PDE domain profile. 359 660 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Sed10g0903 765 Pfam Glycerophosphoryl diester phosphodiesterase family 366 653 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Sed10g0903 765 ProSiteProfiles GP-PDE domain profile. 43 342 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g3684 Sed-Chr4:45804623 Sed10g0903 Sed-Chr10:6959253 1.60E-153 dispersed
Sed10g0903 Sed-Chr10:6959253 Sed07g2717 Sed-Chr7:42373583 9.60E-164 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0903 - - - 0.0