Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0914 ATGGCGAATATGTGTGCTGATAACGGCAATCTCATGGCGATTGCTCACCAAGTTATGAAGCAGAAGCAGCAACAGGAGCAGCACCACCACCACCCACACCAACCGCCGCCGCCGTCGCCGCCGCCCCAGCTGACTGGCCCTTGTACTTTTGCTCTCAACTCGTGGCCGGCTTCGAACCATGCTCTCGCCGGTACTCCGGATTTGGGGTTTGGGCTCGCCGGAGCTGGATTTGCCGACCCGTTTCAGAGAGTGGTCGACGGTGGTGAAACGAGCTTTCAGTTCCCGAACTTGGACCACCATTCCTCTGCCTTTAGATTTTCCGATTTCGACGGCGGCGCTGCCGCGGATTTTGACTCAGACGACTGGATGGAAAGTTTAATGGCTGGCGGAGATTCAACGGATAGCTCGAATCTTCCCTCTGGTTGCGACGCGTGGCAGTCTAATTCCGATTTCGCTTTCTACGGTGCCGATCCCTTTGTCCCCTGTTCTTCCCACTCTGATCTGAACCGTTTCATTTTCCCTGAACCGCCGAAATCTCAACCCGTCGTTCAACCGCCGGCGGTTTCTTGGACGGATCTTCCGCCGGAAACTCCACCCGCGGTGGTTAAGAACACTCCAGTTCCCCTTTCGACGCCGCCGCTTCTTACAACGTTGATTGAATGTGCTCGTGTTTCCGAATCAGAGCCAGATCGGGCGGCGCAAATGGTGATTCAGCTTACGGAATCGTCATCGGAGCGTGGAGATCCGACGGAGAGAGTGGCTTGTTACTTTCTGGAAGCTCTTCGTCGGAGATTATCACTTCAATCGGAGAATCGGTTAGTAGAATCAACTTCTGATGATTTTACTCTGTCTTACAAAGCTCTCAACGACGCTTGCCCTTACTCTAAATTCGCCCATTTGACTGCAAATCAAGCCATACTCGAAATGACAGAGAACGCAACCAAGATTCACATAATCGATTTTGGGATTTCTCAGGGAGTTCAATGGGCGGCTCTTCTTCAGGCTCTCGCAACTCGCTCCACCGGAAAACCCACCGGAATCCGGATCTCCGGCATTCCGGCGCCGATGCTCGGAAAATCCCCGGCATCGGCGCTGTTCGCAACGGGGAATCGACTGGCCGAGTTCGCGAAGCTTCTAGAATTAAACTTCGAATTCGACCCAATCCTAACCCCAATCGAAGATCTGAACGAATCCTCCTTCCGACTCGACTCCGGCGAAACCCTCGCCGTGAACTTCATGCTTCAACTCTACAACCTCCTCGACGAGACCCCACGCGCCGTCGTCCACGTTCTCCAACTGGCCAAATCGCTGAACCCTAGAATCGTAACGCTGGGCGAGTACGAAGCCAGTCTGAACCGGGTCGGGTTCTTCAGGCGGTTCAAGAACGCAGTCAGATACTACTCCGCGGTGTTCGAATCACTCGACCCGAAACTACCTCGCGACTCAAACGAGCGGCTGCAACTCGAAAAGCTGGTACTCGGGCGGCAGATCAACGGCTTGGTAGGACCGGAGCCGTCGCTCGGATCGAAACCGGAACGGATGGAAGACAAAGAACAGTGGAAAAGCATAATGGAGAATTGCGATTATGAACCGGTAAATCTGAGCCATTACGCAAAAAGTCAAGCCAAAATCCTTTTATGGAAATATGATTACAGTTCCGAGTACTGCTTGATGGAATCCTCACCCGGGTTTCTTTCACTGGCCTGGAATGAAGTCCCCATTATTACAGTTTCTTCTTGGCGTTGA 1746 53.09 MANMCADNGNLMAIAHQVMKQKQQQEQHHHHPHQPPPPSPPPQLTGPCTFALNSWPASNHALAGTPDLGFGLAGAGFADPFQRVVDGGETSFQFPNLDHHSSAFRFSDFDGGAAADFDSDDWMESLMAGGDSTDSSNLPSGCDAWQSNSDFAFYGADPFVPCSSHSDLNRFIFPEPPKSQPVVQPPAVSWTDLPPETPPAVVKNTPVPLSTPPLLTTLIECARVSESEPDRAAQMVIQLTESSSERGDPTERVACYFLEALRRRLSLQSENRLVESTSDDFTLSYKALNDACPYSKFAHLTANQAILEMTENATKIHIIDFGISQGVQWAALLQALATRSTGKPTGIRISGIPAPMLGKSPASALFATGNRLAEFAKLLELNFEFDPILTPIEDLNESSFRLDSGETLAVNFMLQLYNLLDETPRAVVHVLQLAKSLNPRIVTLGEYEASLNRVGFFRRFKNAVRYYSAVFESLDPKLPRDSNERLQLEKLVLGRQINGLVGPEPSLGSKPERMEDKEQWKSIMENCDYEPVNLSHYAKSQAKILLWKYDYSSEYCLMESSPGFLSLAWNEVPIITVSSWR 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7131592 7134379 + Sed0018218.1 Sed10g0914 727418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0914 581 MobiDBLite consensus disorder prediction 18 47 - -
Sed10g0914 581 Pfam GRAS domain family 215 581 IPR005202 -
Sed10g0914 581 ProSiteProfiles GRAS family profile. 205 581 IPR005202 -
Sed10g0914 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 212 580 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1687 Sed-Chr7:15118360 Sed10g0914 Sed-Chr10:7131592 5.50E-22 dispersed
Sed07g1702 Sed-Chr7:15568187 Sed10g0914 Sed-Chr10:7131592 7.30E-156 dispersed
Sed10g0914 Sed-Chr10:7131592 Sed11g2281 Sed-Chr11:35982823 5.00E-48 dispersed
Sed10g0914 Sed-Chr10:7131592 Sed05g2984 Sed-Chr5:40472508 1.10E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
39762 PF03514 GRAS 8.70E-107 CL0063 Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0914 - - - 0.0