Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed10g0957 ATGACTAAGCTTGTGAGTTTTGTGCTTGTTCTTTCCCTTCTTGCCTTTGCTCAACTCTGTTTCTGTAGCAGAACTAATGGCCATAGGTCTCTGAACCCTCAATATTATGAGCATTCCTGCCCAAAAGCAAAGGAAATAGTGAAATCCATTGTGGCTAAGGCTTTTGCTAGGGAAGCTCGCATGCCTGCTTCTCTCATTCGACTTCACTTCCATGACTGCTTTGCTCAGGGGTGTGATGCATCTATACTACTAGATAGCAGTGGGAGCATAATGAGTGAAAAGAATTCGAAGCCTAATAAAAACTCAGCTAGAGGGTTTGAAGTGATTGATGAGATCAAATCTGCATTGGAAAGAGAGTGCCCACAAACAGTTTCTTGTGCTGATATCTTAGCTTTGGCTGCAAGAGATTCAACTGTCATTACAGGTGGACCCTCTTGGGAGGTTCCATTGGGAAGGAAGGACTCAAGAAGTGCAAGTTTGAATGGCTCCAACAGCAACATTCCAGGTCCAAACAACATTTTCCAAACCCTTCTCAACAGATTCCATAACCAAGGCCTTGACATCCTTGACCTTGTTACCTTATCTGGATCCCACACCATCGGATATTCAAGGTGCACAAGTTTCAAGCAGAGGCTGTACAACCAAAACGGCGACGGGCAGCCGGACAAAGCCCTTCCGCCGTCGTACGCCGCCGAGCTGCGGAGGCGCTGCCCGAGGTCCGGCGGCGACAGCAACCTGTTTTTCCTTGACTCGGTCAGCCCGACCAAATTCGACAACAGCTACTTCAAGAACATAATTGACCACAGAGCCCTTCTCAACTCCGACCAAATTCTCCTCACCCAAAACGACGTGTCGGCCGCTCTGGTCAACAAATATGCCGACAACATCGACCTGTTCTTCACCCAATTCGCTGAATCTATGATCAAAATGAGTAATATTTCCCCGTTGACCGGCTCCGGTGGAGAGATTAGAAAGACTTGCAGGAACATTAATAACTGA 999 47.25 MTKLVSFVLVLSLLAFAQLCFCSRTNGHRSLNPQYYEHSCPKAKEIVKSIVAKAFAREARMPASLIRLHFHDCFAQGCDASILLDSSGSIMSEKNSKPNKNSARGFEVIDEIKSALERECPQTVSCADILALAARDSTVITGGPSWEVPLGRKDSRSASLNGSNSNIPGPNNIFQTLLNRFHNQGLDILDLVTLSGSHTIGYSRCTSFKQRLYNQNGDGQPDKALPPSYAAELRRRCPRSGGDSNLFFLDSVSPTKFDNSYFKNIIDHRALLNSDQILLTQNDVSAALVNKYADNIDLFFTQFAESMIKMSNISPLTGSGGEIRKTCRNINN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7825997 7828567 + Sed0018544.1 Sed10g0957 727461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed10g0957 332 PANTHER PEROXIDASE 72-RELATED 9 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 ProSiteProfiles Plant heme peroxidase family profile. 30 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 SUPERFAMILY Heme-dependent peroxidases 31 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Sed10g0957 332 FunFam Peroxidase 168 310 - -
Sed10g0957 332 FunFam Peroxidase 34 173 - -
Sed10g0957 332 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 Gene3D - 35 331 - -
Sed10g0957 332 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed10g0957 332 Gene3D Peroxidase, domain 2 168 311 - -
Sed10g0957 332 CDD secretory_peroxidase 31 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed10g0957 332 Pfam Peroxidase 47 295 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0957 Sed-Chr10:7825997 Sed13g1017 Sed-Chr13:8299105 5.50E-132 dispersed
Sed10g0957 Sed-Chr10:7825997 Sed13g1016 Sed-Chr13:8275705 8.20E-128 wgd
Sed10g0957 Sed-Chr10:7825997 Sed14g1158 Sed-Chr14:20964850 2.30E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed10g0957 K00430 - csv:101204648 518.464